prot_F-distichus_contig10113.89.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig10113.89.1
Unique Name	prot_F-distichus_contig10113.89.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	318

Homology

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BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Match: A0A6H5KXX5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX5_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 6.610e-13
Identity = 106/318 (33.33%), Postives = 132/318 (41.51%), Query Frame = 0

Query:    1 MAGFVSAETADKFHQETEKRERLRRARMAAEAKVAAKEARVEKARAARIAAMRAFTVDLQGPKPGDTQQLPSPSQATASIPSTQANSSSTSTGEASNILGSPAGDGTVAHENRGNTEESTRGGSDGAHGLLPASQTNPSETETAAEGSIGRGTGASAGDGVGGEAGWSFARVTAMNGHFPSL-PLTGTSPPKNTSVRLGGTPLPLPKGKAVWGRNAAVETRDKNGARGLVSGVSNAGGGVWGSPKPDASSPRRVESAAPSRVAAGDGDVGGDGALDGDDGGMVVPGSGNSVGNSGKKRGRKAKAVPLFSNAGVRGVGR 317
            M+ FVS ET+ KF +ET+KRER RR+R A EA++  +EAR+E+ RA RIAAMRAFTVDLQGP PG  +Q                                                                       T+  A        GA          GWSFARVTAMNGHFP+L P TG+S     S  +G        G AV   +AA                   G G+  S     ++     +   ++V  G G+  G+GA            +G S G  GKK+GRK KAV LFSNAGVRG  R
Sbjct:  614 MSDFVSDETSRKFREETQKRERKRRSRAAQEARLKKEEARLEQDRADRIAAMRAFTVDLQGPTPGGAEQXXXXXXXXXXXX----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDETAXXXXXXXAGAG---------GWSFARVTAMNGHFPTLKPDTGSS----GSGSVGNNAAARAWGGAV---SAASXXXXXXXXXXXXXXXXXRGNGLLSS----GAAALPTTAVRENKVLVGKGE--GEGA------------AGPSGG--GKKKGRKGKAVSLFSNAGVRGGSR 879

[Close]

BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Match: D7FRK0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK0_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.770e-10
Identity = 103/319 (32.29%), Postives = 128/319 (40.13%), Query Frame = 0

Query:    1 MAGFVSAETADKFHQETEKRERLRRARMAAEAKVAAKEARVEKARAARIAAMRAFTVDLQGPKPGDTQQLPSPSQATASIPSTQANSSSTSTGEASNILGSPAGDGTVAHENRGNTEESTRGGSDGAHGLLPASQTNPSETETAAEGSIGRGTGASAGDGVGGEAGWSFARVTAMNGHFPSL-PLTGTSPPKNTSVRLGGTPLPLPKGKAVWGRNAAVETRDKNGARGLVSGVSNAGGGVWGSPKPDASSPRRVESAAPSRVAAGDGDVGGDGALDGDDGGMVVPGSGNS-VGNSGKKRGRKAKAVPLFSNAGVRGVGR 317
            M   VS ET+ KF ++T+KRER RR+R+A EA++  +EAR+E+ RA RIAAMRAFTVDLQGP PG  +                                                                A     +  ETA    +     +SAG G     GWSFARVTAMNGHFP+L P  G+S                  G    G NAA       GA G  + V++                 R      S  AA       +  +      +VV G G +      KK+GRK KAV LFSNAGVRG  R
Sbjct:  632 MLDLVSDETSRKFREDTQKRERKRRSRVAQEARLKKEEARLERDRADRIAAMRAFTVDLQGPTPGGAEXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGLGGVATDETAVAAGV-----SSAGAG-----GWSFARVTAMNGHFPTLKPDAGSS------------------GSGSVGNNAAA------GAWGGAASVTSTXXXXXXXXXXXXXXXXRGNGLLSSGAAALPTTAVRENRV------VVVEGEGAAGPXXXXKKKGRKGKAVSLFSNAGVRGGSR 897

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot

BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KXX5_9PHAE	6.610e-13	33.33	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
D7FRK0_ECTSI	1.770e-10	32.29	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 13..47

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 13..47

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig10113	contig	F-distichus_contig10113:363..2875 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig10113.89.1	mRNA_F-distichus_contig10113.89.1	Fucus distichus monoicous	mRNA	F-distichus_contig10113 255..3335 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig10113.89.1 ID=prot_F-distichus_contig10113.89.1|Name=mRNA_F-distichus_contig10113.89.1|organism=Fucus distichus monoicous|type=polypeptide|length=318bp
MAGFVSAETADKFHQETEKRERLRRARMAAEAKVAAKEARVEKARAARIA
AMRAFTVDLQGPKPGDTQQLPSPSQATASIPSTQANSSSTSTGEASNILG
SPAGDGTVAHENRGNTEESTRGGSDGAHGLLPASQTNPSETETAAEGSIG
RGTGASAGDGVGGEAGWSFARVTAMNGHFPSLPLTGTSPPKNTSVRLGGT
PLPLPKGKAVWGRNAAVETRDKNGARGLVSGVSNAGGGVWGSPKPDASSP
RRVESAAPSRVAAGDGDVGGDGALDGDDGGMVVPGSGNSVGNSGKKRGRK
AKAVPLFSNAGVRGVGR*