mRNA_F-distichus_contig10113.89.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Match: A0A6H5KXX5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX5_9PHAE) HSP 1 Score: 143 bits (361), Expect = 9.160e-33 Identity = 134/354 (37.85%), Postives = 167/354 (47.18%), Query Frame = 1
Query: 1 QVLEVETVKLNPELRRRLPFLGHLPVHCDVTFLELDMAGFVSAETADKFHQETEKRERLRRARMAAEAKVAAKEARVEKARAARIAAMRAFTVDLQGPKPGDTQQLPSPSQATASIPSTQANSSSTSTGEASNILGSPAGDGTVAHENRGNTEESTRGGSDGAHGLLPASQTNPSETETAAEGSIGRGTGASAGDGVGGEAGWSFARVTAMNGHFPSL-PLTGTSPPKNTSVRLGGTPLPLPKGKAVWGRNAAVETRDKNGARGLVSGVSNAGGGVWGSPKPDASSPRRVESAAPSRVAAGDGDVGGDGALDGDDGGMVVPGSGNSVGNSGKKRGRKAKAVPLFSNAGVRGVGR 1059
+VLEVETVKL P+LR+RLPFLGHLP+HCD++FLE+DM+ FVS ET+ KF +ET+KRER RR+R A EA++ +EAR+E+ RA RIAAMRAFTVDLQGP PG +Q T+ A GA GWSFARVTAMNGHFP+L P TG+S S +G G AV +AA G G+ S ++ + ++V G G+ G+GA +G S G GKK+GRK KAV LFSNAGVRG R
Sbjct: 578 KVLEVETVKLTPDLRKRLPFLGHLPIHCDISFLEVDMSDFVSDETSRKFREETQKRERKRRSRAAQEARLKKEEARLEQDRADRIAAMRAFTVDLQGPTPGGAEQXXXXXXXXXXXX----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDETAXXXXXXXAGAG---------GWSFARVTAMNGHFPTLKPDTGSS----GSGSVGNNAAARAWGGAV---SAASXXXXXXXXXXXXXXXXXRGNGLLSS----GAAALPTTAVRENKVLVGKGE--GEGA------------AGPSGG--GKKKGRKGKAVSLFSNAGVRGGSR 879
BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Match: D7FRK0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK0_ECTSI) HSP 1 Score: 137 bits (345), Expect = 1.050e-30 Identity = 132/355 (37.18%), Postives = 163/355 (45.92%), Query Frame = 1
Query: 1 QVLEVETVKLNPELRRRLPFLGHLPVHCDVTFLELDMAGFVSAETADKFHQETEKRERLRRARMAAEAKVAAKEARVEKARAARIAAMRAFTVDLQGPKPGDTQQLPSPSQATASIPSTQANSSSTSTGEASNILGSPAGDGTVAHENRGNTEESTRGGSDGAHGLLPASQTNPSETETAAEGSIGRGTGASAGDGVGGEAGWSFARVTAMNGHFPSL-PLTGTSPPKNTSVRLGGTPLPLPKGKAVWGRNAAVETRDKNGARGLVSGVSNAGGGVWGSPKPDASSPRRVESAAPSRVAAGDGDVGGDGALDGDDGGMVVPGSGNS-VGNSGKKRGRKAKAVPLFSNAGVRGVGR 1059
+VLEVETVKL PELR+RLPFLGHLP+HCD++FLE+DM VS ET+ KF ++T+KRER RR+R+A EA++ +EAR+E+ RA RIAAMRAFTVDLQGP PG + A + ETA + +SAG G GWSFARVTAMNGHFP+L P G+S G G NAA GA G + V++ R S AA + + +VV G G + KK+GRK KAV LFSNAGVRG R
Sbjct: 596 KVLEVETVKLTPELRKRLPFLGHLPIHCDISFLEVDMLDLVSDETSRKFREDTQKRERKRRSRVAQEARLKKEEARLERDRADRIAAMRAFTVDLQGPTPGGAEXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGLGGVATDETAVAAGV-----SSAGAG-----GWSFARVTAMNGHFPTLKPDAGSS------------------GSGSVGNNAAA------GAWGGAASVTSTXXXXXXXXXXXXXXXXRGNGLLSSGAAALPTTAVRENRV------VVVEGEGAAGPXXXXKKKGRKGKAVSLFSNAGVRGGSR 897
BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Match: A0A835ZED2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZED2_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 2.020e-10 Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 1
Query: 1 QVLEVETVKLNPELRRRLPFLGHLPVHCDVTFLELDMAGFVSAETADKFHQETEKRERLRRARMAAEAKVAAKEARVEKARAARIAAMRAFTVDLQGPKPGDTQQLPSP 327
+VLEVET +L ELRRR FLGHLP HC ++F+ELD+ +S +T DK+ + ++R + R+A R A +++R TVDL GP PG + LP P
Sbjct: 277 RVLEVETFRLTRELRRRYAFLGHLPEHCSISFVELDLTQTLSQQTQDKYGADLQRRHKRRQAAXXXXXXXXXXXXXXXXXREALFSSLRTATVDLSGPPPG-SPALPPP 384
BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Match: A0A485L4U1_9STRA (Aste57867_15595 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4U1_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 9.560e-7 Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 1 QVLEVETVKLNPELRRRLPFLGHLPVHCDVTFLELDMAGFVSAETADKFHQETEKRERLR 180
+VLE+E + +N E R+R +L HLP HCDV +E+D+AG VSA T F E +KR R R
Sbjct: 347 KVLEIEHIVMNDETRKRFRYLSHLPSHCDVFLVEVDLAGLVSAATIAHFQHELKKRARTR 406
BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Match: A0A3R6ZSF1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZSF1_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 4.780e-6 Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 4 VLEVETVKLNPELRRRLPFLGHLPVHCDVTFLELDMAGFVSAETADKFHQETEKRERLR 180
VLE+E V +N ++R+R ++ HLP HCD+ +E+D+AG VS +T F E +KR R R
Sbjct: 200 VLEIEHVVMNDDVRKRFRYMAHLPSHCDLFLVEVDLAGIVSPDTMSHFQTEFKKRARAR 258
BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Match: A0A024USS5_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USS5_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 6.540e-6 Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 4 VLEVETVKLNPELRRRLPFLGHLPVHCDVTFLELDMAGFVSAETADKFHQETEKRERLR 180
VLE+E V +N ++R+R ++ HLP HCD+ +E+D+AG VS +T F E +KR R R
Sbjct: 359 VLEIEHVVMNDDVRKRFRYMAHLPSHCDLFLVEVDLAGIVSPDTMSHFQTEFKKRARAR 417
BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Match: A0A418AI38_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AI38_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 8.370e-6 Identity = 24/57 (42.11%), Postives = 39/57 (68.42%), Query Frame = 1
Query: 4 VLEVETVKLNPELRRRLPFLGHLPVHCDVTFLELDMAGFVSAETADKFHQETEKRER 174
VLE+E V +N ++R+R ++ HLP HCD+ + +D+ G +S +T + F E +KRER
Sbjct: 22 VLEIEHVVMNDDVRKRFRYMAHLPSHCDLFLVGVDLTGIISPDTQNHFQAEFKKRER 78
BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Match: A0A8H7PIP1_9FUNG (RING-type domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PIP1_9FUNG) HSP 1 Score: 58.9 bits (141), Expect = 1.710e-5 Identity = 33/69 (47.83%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 1 QVLEVETVKLNPELRRRLPFLGHLPVHCDVTFLELDMAGFVSAETADKFHQETEKRERLRRARMAAEAK 207
+V +VE L ELR+R +L HLP+ CDVTFLE+D+ G VS T D F E R+R R R E K
Sbjct: 518 RVNDVEESTLTEELRKRFKYLSHLPLTCDVTFLEVDLKGVVSDATLDHFSNELRIRQRKRNERSRREEK 586
BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Match: A0A7S1UL09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UL09_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 2.160e-5 Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 1 QVLEVETVKLNPELRRRLPFLGHLPVHCDVTFLELDMAGFVSAETADKFHQETEKRERLR 180
++L+VE + L P+LR+R+PFL HLP + D+ F+ELD+ +S T KF E KR++ R
Sbjct: 221 KILQVENLHLTPDLRKRMPFLSHLPPYTDIRFIELDLNYMLSDATRKKFKSEFYKRKQKR 280
BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Match: A0A835YQ46_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ46_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.030e-5 Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 4 VLEVETVKLNPELRRRLPFLGHLPVHCDVTFLELDMAGFVSAETAD 141
+LEVET +L+ +LRRR FLGHLP HC V F+ELD+A +S + D
Sbjct: 514 ILEVETFRLSQDLRRRYAFLGHLPEHCSVMFVELDLANQLSDQRED 559 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10113.89.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10113.89.1 >prot_F-distichus_contig10113.89.1 ID=prot_F-distichus_contig10113.89.1|Name=mRNA_F-distichus_contig10113.89.1|organism=Fucus distichus monoicous|type=polypeptide|length=318bp MAGFVSAETADKFHQETEKRERLRRARMAAEAKVAAKEARVEKARAARIAback to top mRNA from alignment at F-distichus_contig10113:255..3335+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10113.89.1 ID=mRNA_F-distichus_contig10113.89.1|Name=mRNA_F-distichus_contig10113.89.1|organism=Fucus distichus monoicous|type=mRNA|length=3081bp|location=Sequence derived from alignment at F-distichus_contig10113:255..3335+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10113:255..3335+ >mRNA_F-distichus_contig10113.89.1 ID=mRNA_F-distichus_contig10113.89.1|Name=mRNA_F-distichus_contig10113.89.1|organism=Fucus distichus monoicous|type=CDS|length=1908bp|location=Sequence derived from alignment at F-distichus_contig10113:255..3335+ (Fucus distichus monoicous)back to top |