prot_F-distichus_contig101065.84.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig101065.84.1
Unique Nameprot_F-distichus_contig101065.84.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length99
Homology
BLAST of mRNA_F-distichus_contig101065.84.1 vs. uniprot
Match: D7G779_ECTSI (L51_S25_CI-B8 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G779_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 7.290e-50
Identity = 76/96 (79.17%), Postives = 87/96 (90.62%), Query Frame = 0
Query:    1 MASRGVFQLRKLTVKYCERSGSSRGARDFIRHCILDFANKTPAAEVVTELRPGKHPYIMGEYLTGSSKVIGVKNITPKEIMDYAMMLRNTSGRKVR 96
            MA+RGVFQLRKLT+KYC+ SGSS+GAR+FIRH I++FAN TPAAEVVTELRPGKHPYIMG+Y+TG  K IG+KNI P EIMDYAMMLRN+SG KVR
Sbjct:    1 MATRGVFQLRKLTLKYCDHSGSSKGAREFIRHRIVEFANNTPAAEVVTELRPGKHPYIMGDYVTGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVR 96          
BLAST of mRNA_F-distichus_contig101065.84.1 vs. uniprot
Match: A0A5J4YAV1_9CHLO (Mitochondrial ribosomal L51 S25 CI-B8 family n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YAV1_9CHLO)

HSP 1 Score: 103 bits (258), Expect = 1.090e-26
Identity = 49/94 (52.13%), Postives = 67/94 (71.28%), Query Frame = 0
Query:    1 MASRGVFQLRKLTVKYCERSGSSRGARDFIRHCILDFANKTPAAEVVTELRPGKHPYIMGEYLTGSSKVIGVKNITPKEIMDYAMMLRNTSGRK 94
            M  RGV+QL++LTV +CE SGSSRGAR+F++  +  FA      EV  E++PG+HP + GEY  GSS+ +GVKN   +E++  AMMLR+T GRK
Sbjct:    1 MTQRGVWQLQRLTVSFCEHSGSSRGAREFVKSFLPLFAEDNKHIEVKAEVKPGRHPCLRGEYRNGSSRQVGVKNEPQEELLRQAMMLRSTIGRK 94          
BLAST of mRNA_F-distichus_contig101065.84.1 vs. uniprot
Match: A0A835ZEX9_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEX9_9STRA)

HSP 1 Score: 100 bits (248), Expect = 4.360e-25
Identity = 46/96 (47.92%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    1 MASRGVFQLRKLTVKYCERSGSSRGARDFIRHCILDFANKTPAAEVVTELRPGKHPYIMGEYLTGSSKVIGVKNITPKEIMDYAMMLRNTSGRKVR 96
            MA+RGV QL+++ ++YC+  GSS+G RDFI   ++ FA   P  E++TE+R  +HP I  +YLTG  K +GVKN  P  I D+   LR T+GRK R
Sbjct:    1 MATRGVMQLQRIHIRYCDWGGSSQGMRDFIGRELVAFAKAVPHCEIITEVRRNRHPIIRADYLTGIPKTLGVKNEAPSAIRDFLHRLRTTTGRKQR 96          
BLAST of mRNA_F-distichus_contig101065.84.1 vs. uniprot
Match: A0A7S2W7Q4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W7Q4_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.040e-24
Identity = 51/96 (53.12%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    1 MASRGVFQLRKLTVKYCERSGSSRGARDFIRHC-ILDFANKTPAAEVVTELRPGKHPYIMGEYLTGSSKVIGVKNITPKEIMDYAMMLRNTSGRKV 95
            MA+RGV QL+KL + YCE  GSS   R+FI    I+ FA K P+  V+ +LR G HPYI G+YLTG+SK I +KN T   I+    ML NTSGRK+
Sbjct:   31 MATRGVKQLQKLRIVYCEHGGSSASIREFISSGKIVSFAEKNPSVTVIAQLRNGNHPYIKGQYLTGNSKQICIKNETVPRIVKVVHMLNNTSGRKI 126          
BLAST of mRNA_F-distichus_contig101065.84.1 vs. uniprot
Match: I0YX17_COCSC (L51_S25_CI-B8 domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YX17_COCSC)

HSP 1 Score: 99.0 bits (245), Expect = 1.350e-24
Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = 0
Query:    1 MASRGVFQLRKLTVKYCERSGSSRGARDFIRHCILDFANKTPAAEVVTELRPGKHPYIMGEYLTGSSKVIGVKNITPKEIMDYAMMLRNTSGRKVRVR 98
            MA  GV+QLRKLT+ YC  SGSSRGAR F+   +  F  + P  +V+ +L+PG+HPY+  EY  G  + +GVKN  P  ++ +A+MLR+ +GR   V+
Sbjct:    1 MARLGVWQLRKLTLNYCNISGSSRGARTFVEDYLPTFKQENPHLQVLEDLQPGRHPYLKAEYRNGRVRTVGVKNELPDGVLRHAVMLRSAAGRSTHVK 98          
BLAST of mRNA_F-distichus_contig101065.84.1 vs. uniprot
Match: A0A1S3BXU0_CUCME (54S ribosomal protein L51, mitochondrial n=3 Tax=Magnoliopsida TaxID=3398 RepID=A0A1S3BXU0_CUCME)

HSP 1 Score: 98.2 bits (243), Expect = 1.890e-24
Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 0
Query:    1 MASRGVFQLRKLTVKYCERSGSSRGARDFIRHCILDFANKTPAAEVVTELRPGKHPYIMGEYLTGSSKVIGVKNITPKEIMDYAMMLRNTSGRKV 95
            MA RGV+QL+KL V YC+  GSSRG R F+   +  F  K P  EVVTEL  G+HPY+ G Y + +++V+ VKN+ P+EI   A  LRN+ GRKV
Sbjct:    1 MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKGFYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKV 95          
BLAST of mRNA_F-distichus_contig101065.84.1 vs. uniprot
Match: A9S2L6_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S2L6_PHYPA)

HSP 1 Score: 97.4 bits (241), Expect = 3.810e-24
Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 0
Query:    1 MASRGVFQLRKLTVKYCERSGSSRGARDFIRHCILDFANKTPAAEVVTELRPGKHPYIMGEYLTGSSKVIGVKNITPKEIMDYAMMLRNTSGRKV 95
            MA RGV+QL+KL V +C+ SGSS GAR+F+           P  EV T+L PG+HPY+ G YL  + +V+ VKN   +EI+  AM LRN++GRKV
Sbjct:    1 MAVRGVWQLQKLIVCFCDHSGSSAGAREFVARIFPTLQKNNPQFEVATQLVPGQHPYLRGLYLNKNDRVVDVKNKNAEEILTQAMRLRNSTGRKV 95          
BLAST of mRNA_F-distichus_contig101065.84.1 vs. uniprot
Match: B8LDZ0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LDZ0_THAPS)

HSP 1 Score: 97.4 bits (241), Expect = 5.610e-24
Identity = 46/97 (47.42%), Postives = 65/97 (67.01%), Query Frame = 0
Query:    1 MASRGVFQLRKLTVKYCERSGSSRGARDFIRHC--ILDFANKTPAAEVVTELRPGKHPYIMGEYLTGSSKVIGVKNITPKEIMDYAMMLRNTSGRKV 95
            MA+RG+ QL+KL ++YCE  GSS   R ++++   +L+FA   P  +++ + R G HPYI GEY+TG SK + VKN T K + D    LRNTSGRK+
Sbjct:    1 MATRGIQQLQKLRIRYCEIGGSSATVRSYLQNSPHLLNFAKANPQIQIIVKPRNGHHPYIQGEYITGQSKQVCVKNTTEKRVKDVMDHLRNTSGRKI 97          
BLAST of mRNA_F-distichus_contig101065.84.1 vs. uniprot
Match: A0A0D2USP7_GOSRA (L51_S25_CI-B8 domain-containing protein n=11 Tax=Gossypium TaxID=3633 RepID=A0A0D2USP7_GOSRA)

HSP 1 Score: 97.8 bits (242), Expect = 6.260e-24
Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 0
Query:    1 MASRGVFQLRKLTVKYCERSGSSRGARDFIRHCILDFANKTPAAEVVTELRPGKHPYIMGEYLTGSSKVIGVKNITPKEIMDYAMMLRNTSGRKV 95
            MA RGV+QL+KL V YC+  GSSRG R F+   +  F  K P  EVVTEL  G+HP++ G Y   + +V+ VKN+TP++I+ YA  LRN  GRKV
Sbjct:   32 MALRGVWQLKKLIVSYCDWGGSSRGIRAFMESELPTFKEKNPQLEVVTELIRGQHPHLKGFYKNKNERVVCVKNMTPEDILLYATRLRNALGRKV 126          
BLAST of mRNA_F-distichus_contig101065.84.1 vs. uniprot
Match: A0A176VTC2_MARPO (L51_S25_CI-B8 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VTC2_MARPO)

HSP 1 Score: 96.7 bits (239), Expect = 7.660e-24
Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = 0
Query:    1 MASRGVFQLRKLTVKYCERSGSSRGARDFIRHCILDFANKTPAAEVVTELRPGKHPYIMGEYLTGSSKVIGVKNITPKEIMDYAMMLRNTSGRKV 95
            MA RGV+QL+KL + +C+ SGSSRGAR+F+   +  F  + P  EV+TEL  G+HP++ G +   + +V+ VKN+  +E+   AM LRN++GRKV
Sbjct:    1 MAVRGVWQLKKLVLYFCDHSGSSRGAREFVESILPKFKLENPQLEVLTELHRGRHPHLKGHFANKNERVVDVKNLDSQEVALQAMRLRNSTGRKV 95          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101065.84.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G779_ECTSI7.290e-5079.17L51_S25_CI-B8 domain-containing protein n=2 Tax=Ec... [more]
A0A5J4YAV1_9CHLO1.090e-2652.13Mitochondrial ribosomal L51 S25 CI-B8 family n=1 T... [more]
A0A835ZEX9_9STRA4.360e-2547.92Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S2W7Q4_9STRA1.040e-2453.13Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
I0YX17_COCSC1.350e-2445.92L51_S25_CI-B8 domain-containing protein n=1 Tax=Co... [more]
A0A1S3BXU0_CUCME1.890e-2451.5854S ribosomal protein L51, mitochondrial n=3 Tax=M... [more]
A9S2L6_PHYPA3.810e-2449.47Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
B8LDZ0_THAPS5.610e-2447.42Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A0D2USP7_GOSRA6.260e-2451.58L51_S25_CI-B8 domain-containing protein n=11 Tax=G... [more]
A0A176VTC2_MARPO7.660e-2446.32L51_S25_CI-B8 domain-containing protein n=2 Tax=Ma... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 18..91
e-value: 1.4E-14
score: 64.5
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 26..74
e-value: 1.1E-8
score: 34.8
NoneNo IPR availableGENE3D3.40.30.10coord: 2..98
e-value: 2.0E-29
score: 104.3
IPR03992739S ribosomal protein L43/54S ribosomal protein L51PANTHERPTHR2139639S RIBOSOMAL PROTEIN L43coord: 1..96
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 8..92

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 18..91
e-value: 1.4E-14
score: 64.5
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 26..74
e-value: 1.1E-8
score: 34.8
NoneNo IPR availableGENE3D3.40.30.10coord: 2..98
e-value: 2.0E-29
score: 104.3
IPR03992739S ribosomal protein L43/54S ribosomal protein L51PANTHERPTHR2139639S RIBOSOMAL PROTEIN L43coord: 1..96
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 8..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101065contigF-distichus_contig101065:723..1019 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101065.84.1mRNA_F-distichus_contig101065.84.1Fucus distichus monoicousmRNAF-distichus_contig101065 723..1019 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig101065.84.1 ID=prot_F-distichus_contig101065.84.1|Name=mRNA_F-distichus_contig101065.84.1|organism=Fucus distichus monoicous|type=polypeptide|length=99bp
MASRGVFQLRKLTVKYCERSGSSRGARDFIRHCILDFANKTPAAEVVTEL
RPGKHPYIMGEYLTGSSKVIGVKNITPKEIMDYAMMLRNTSGRKVRVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007741Ribosome/NADH_DH
IPR039927MRPL43/MRPL51
IPR036249Thioredoxin-like_sf