prot_F-distichus_contig101064.83.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig101064.83.1
Unique Nameprot_F-distichus_contig101064.83.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length67
Homology
BLAST of mRNA_F-distichus_contig101064.83.1 vs. uniprot
Match: A0A6H5KMF3_9PHAE (Hist_deacetyl domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMF3_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 2.290e-34
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0
Query:    1 RNAFCAVRPPGHHAGPRGLVTCGNDMHGSHGFCLLNNVAVGAAYARCVHRHAGVDKVAIIDFDVHHG 67
            RNAFCAVRPPGHHAG RGLVTC ND  GSHGFCLLNNVA+GAAYARCVHRH GV++VAI+DFDVHHG
Sbjct:  680 RNAFCAVRPPGHHAGTRGLVTCANDGTGSHGFCLLNNVAIGAAYARCVHRHTGVERVAIVDFDVHHG 746          
BLAST of mRNA_F-distichus_contig101064.83.1 vs. uniprot
Match: A0A7S1GP53_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GP53_CYCTE)

HSP 1 Score: 118 bits (296), Expect = 3.700e-33
Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    2 NAFCAVRPPGHHAGPRGLVTCGNDMHG-SHGFCLLNNVAVGAAYARCVHRHAGVDKVAIIDFDVHHG 67
            NAFCAVRPPGHHAGPRG+V C ND  G SHGFCLLNNVA+GAAYARC++R+ G+ K+AI+DFDVHHG
Sbjct:    1 NAFCAVRPPGHHAGPRGIVRCANDPDGGSHGFCLLNNVAIGAAYARCMYRNDGIRKIAIVDFDVHHG 67          
BLAST of mRNA_F-distichus_contig101064.83.1 vs. uniprot
Match: A0A2J7ZSV2_9CHLO (tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZSV2_9CHLO)

HSP 1 Score: 122 bits (305), Expect = 2.120e-32
Identity = 53/67 (79.10%), Postives = 59/67 (88.06%), Query Frame = 0
Query:    1 RNAFCAVRPPGHHAGPRGLVTCGNDMHGSHGFCLLNNVAVGAAYARCVHRHAGVDKVAIIDFDVHHG 67
            RNAFCAVRPPGHHAGP G+V   ND HGSHGFCLL+NVA+GAAYA  VHRHAG+ +VAI+DFDVHHG
Sbjct:  142 RNAFCAVRPPGHHAGPTGVVPAPNDPHGSHGFCLLSNVAIGAAYAMSVHRHAGISRVAIVDFDVHHG 208          
BLAST of mRNA_F-distichus_contig101064.83.1 vs. uniprot
Match: A0A8J9SU04_PHATR (Hypothetical protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SU04_PHATR)

HSP 1 Score: 119 bits (297), Expect = 2.350e-32
Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    1 RNAFCAVRPPGHHAGPRGLVTCGNDMHG-SHGFCLLNNVAVGAAYARCVHRHAGVDKVAIIDFDVHHG 67
            RNAFCAVRPPGHHAGP G+V C ND  G SHGFCLLNNVA+GAAYAR ++RH G+ KVAI+DFDVHHG
Sbjct:   35 RNAFCAVRPPGHHAGPTGIVKCANDPEGGSHGFCLLNNVAIGAAYARSMYRHEGIQKVAIVDFDVHHG 102          
BLAST of mRNA_F-distichus_contig101064.83.1 vs. uniprot
Match: A0A7S0N8J5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0N8J5_9CHLO)

HSP 1 Score: 116 bits (290), Expect = 3.220e-32
Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    1 RNAFCAVRPPGHHAGPRGLVTCGNDMHGSHGFCLLNNVAVGAAYARCVHRHAGVDKVAIIDFDVHHG 67
            R AFCAVRPPGHHAGP G+V   ND HGSHGFCLL+N+A+GAAYA  VHRHAGV +VAI+DFDVHHG
Sbjct:   38 RAAFCAVRPPGHHAGPGGVVPNDNDPHGSHGFCLLSNIAIGAAYAMHVHRHAGVKRVAILDFDVHHG 104          
BLAST of mRNA_F-distichus_contig101064.83.1 vs. uniprot
Match: A0A7S3Q0M5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0M5_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.520e-32
Identity = 55/67 (82.09%), Postives = 61/67 (91.04%), Query Frame = 0
Query:    1 RNAFCAVRPPGHHAGPRGLVTCGNDMHGSHGFCLLNNVAVGAAYARCVHRHAGVDKVAIIDFDVHHG 67
            RNAFCAVRPPGHHAGPRG+V C ND  GSHGFCLLNNVA+GAAYARC++R+ G+ KVAIIDFDVHHG
Sbjct:  685 RNAFCAVRPPGHHAGPRGIVKCENDPEGSHGFCLLNNVAIGAAYARCMYRNDGIKKVAIIDFDVHHG 751          
BLAST of mRNA_F-distichus_contig101064.83.1 vs. uniprot
Match: B8C1J3_THAPS (Histone deacetylase 1 HDAC Hda1p n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1J3_THAPS)

HSP 1 Score: 124 bits (310), Expect = 1.710e-31
Identity = 55/67 (82.09%), Postives = 61/67 (91.04%), Query Frame = 0
Query:    1 RNAFCAVRPPGHHAGPRGLVTCGNDMHGSHGFCLLNNVAVGAAYARCVHRHAGVDKVAIIDFDVHHG 67
            RNAFCAVRPPGHHAGPRG+VTC ND  GSHGFCLLNNVA+GAAYAR ++R+ G+ KVAIIDFDVHHG
Sbjct:  351 RNAFCAVRPPGHHAGPRGIVTCPNDPDGSHGFCLLNNVAIGAAYARSMYRNDGIKKVAIIDFDVHHG 417          
BLAST of mRNA_F-distichus_contig101064.83.1 vs. uniprot
Match: A0A7S2LK53_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LK53_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.980e-31
Identity = 53/67 (79.10%), Postives = 61/67 (91.04%), Query Frame = 0
Query:    1 RNAFCAVRPPGHHAGPRGLVTCGNDMHGSHGFCLLNNVAVGAAYARCVHRHAGVDKVAIIDFDVHHG 67
            RNAFCA+RPPGHHAGPRG+VTC ND  GSHGFCLLNN+A+GAAYAR ++R+ G+ KVAIIDFDVHHG
Sbjct:  570 RNAFCAIRPPGHHAGPRGIVTCPNDPDGSHGFCLLNNIAIGAAYARSMYRNDGIKKVAIIDFDVHHG 636          
BLAST of mRNA_F-distichus_contig101064.83.1 vs. uniprot
Match: A0A7S2QZ77_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2QZ77_9STRA)

HSP 1 Score: 122 bits (307), Expect = 5.330e-31
Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    1 RNAFCAVRPPGHHAGPRGLVTCGNDMHGSHGFCLLNNVAVGAAYARCVHRHAGVDKVAIIDFDVHHG 67
            RNAFCAVRPPGHHAGPRG+V C ND  GSHGFCLLNNVA+GAAYAR ++R+ G+ KVAIIDFDVHHG
Sbjct:  334 RNAFCAVRPPGHHAGPRGIVKCANDPEGSHGFCLLNNVAIGAAYARSMYRNDGIKKVAIIDFDVHHG 400          
BLAST of mRNA_F-distichus_contig101064.83.1 vs. uniprot
Match: A0A8J4CEM7_9CHLO (Hist_deacetyl domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CEM7_9CHLO)

HSP 1 Score: 122 bits (307), Expect = 5.440e-31
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    1 RNAFCAVRPPGHHAGPRGLVTCGNDMHGSHGFCLLNNVAVGAAYARCVHRHAGVDKVAIIDFDVHHG 67
            RNAFCAVRPPGHHAGP G+VT  ND HGSHGFC+L+NVA+GAAYA  VHRHAG+ +VAI+DFDVHHG
Sbjct:  528 RNAFCAVRPPGHHAGPCGIVTNPNDSHGSHGFCILSNVAIGAAYAMAVHRHAGIQRVAIVDFDVHHG 594          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101064.83.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMF3_9PHAE2.290e-3486.57Hist_deacetyl domain-containing protein n=2 Tax=Ec... [more]
A0A7S1GP53_CYCTE3.700e-3377.61Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A2J7ZSV2_9CHLO2.120e-3279.10tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like ... [more]
A0A8J9SU04_PHATR2.350e-3277.94Hypothetical protein (Fragment) n=3 Tax=Phaeodacty... [more]
A0A7S0N8J5_9CHLO3.220e-3277.61Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A7S3Q0M5_9STRA4.520e-3282.09Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
B8C1J3_THAPS1.710e-3182.09Histone deacetylase 1 HDAC Hda1p n=1 Tax=Thalassio... [more]
A0A7S2LK53_9STRA3.980e-3179.10Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2QZ77_9STRA5.330e-3180.60Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A8J4CEM7_9CHLO5.440e-3179.10Hist_deacetyl domain-containing protein n=2 Tax=Vo... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 1..67
e-value: 1.0E-22
score: 82.6
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 1..67
e-value: 3.2E-17
score: 63.0
NoneNo IPR availablePANTHERPTHR45634:SF14coord: 1..67
NoneNo IPR availablePANTHERPTHR45634FAMILY NOT NAMEDcoord: 1..67
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 1..67

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 1..67
e-value: 1.0E-22
score: 82.6
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 1..67
e-value: 3.2E-17
score: 63.0
NoneNo IPR availablePANTHERPTHR45634:SF14coord: 1..67
NoneNo IPR availablePANTHERPTHR45634FAMILY NOT NAMEDcoord: 1..67
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101064contigF-distichus_contig101064:151..940 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101064.83.1mRNA_F-distichus_contig101064.83.1Fucus distichus monoicousmRNAF-distichus_contig101064 151..940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig101064.83.1 ID=prot_F-distichus_contig101064.83.1|Name=mRNA_F-distichus_contig101064.83.1|organism=Fucus distichus monoicous|type=polypeptide|length=67bp
RNAFCAVRPPGHHAGPRGLVTCGNDMHGSHGFCLLNNVAVGAAYARCVHR
HAGVDKVAIIDFDVHHG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037138His_deacetylse_dom_sf
IPR023801His_deacetylse_dom
IPR023696Ureohydrolase_dom_sf