prot_F-distichus_contig100838.67.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig100838.67.1
Unique Name	prot_F-distichus_contig100838.67.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	119

Homology

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BLAST of mRNA_F-distichus_contig100838.67.1 vs. uniprot
Match: D7FR15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR15_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 5.080e-38
Identity = 70/111 (63.06%), Postives = 88/111 (79.28%), Query Frame = 0

Query:    1 DLAVNSNIGSAGESIQSVNQEIRRTSGMRRGVVYSAGGFVLVLSLLYVLVGFYALRKDDGNGKAGGARMRGPIMMGCLFLPLTLIVILLCWFLFGLSTSLALLTADFCVSP 111
            +L  +  +GS   +I  + +E   T   RRGVVY+AG  VLV+S++YV VG+YAL KDDG GKAGGARMRGP+++GCL LPLTL+VILLCWFLFG+STS+ALLT+DFCV P
Sbjct:  265 ELIEDDQLGSVSTNILELEEEFSNTQTTRRGVVYAAGALVLVMSVVYVSVGYYALGKDDGRGKAGGARMRGPVLIGCLILPLTLLVILLCWFLFGVSTSVALLTSDFCVDP 375

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BLAST of mRNA_F-distichus_contig100838.67.1 vs. uniprot
Match: A0A6H5JJC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC9_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.320e-37
Identity = 70/111 (63.06%), Postives = 87/111 (78.38%), Query Frame = 0

Query:    1 DLAVNSNIGSAGESIQSVNQEIRRTSGMRRGVVYSAGGFVLVLSLLYVLVGFYALRKDDGNGKAGGARMRGPIMMGCLFLPLTLIVILLCWFLFGLSTSLALLTADFCVSP 111
            +L  +  +GS   +I  + +E   T   RRGVVY+AG  VLV+S++YV VGFYAL KDDG GK GGARMRGP+++GCL LPLTL+VILLCWFLFG+STS+ALLT+DFCV P
Sbjct:  766 ELIEDDQLGSVSTNILELEEEFSNTQTTRRGVVYAAGALVLVMSVVYVSVGFYALGKDDGRGKDGGARMRGPVLIGCLILPLTLLVILLCWFLFGVSTSVALLTSDFCVDP 876

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig100838.67.1 vs. uniprot

BLAST of mRNA_F-distichus_contig100838.67.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FR15_ECTSI	5.080e-38	63.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JJC9_9PHAE	1.320e-37	63.06	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 95..118
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..31
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 73..94
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 32..53
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 54..72
None	No IPR available	TMHMM	TMhelix		coord: 31..53
None	No IPR available	TMHMM	TMhelix		coord: 73..95

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 95..118
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..31
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 73..94
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 32..53
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 54..72
None	No IPR available	TMHMM	TMhelix		coord: 31..53
None	No IPR available	TMHMM	TMhelix		coord: 73..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig100838	contig	F-distichus_contig100838:386..1666 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig100838.67.1	mRNA_F-distichus_contig100838.67.1	Fucus distichus monoicous	mRNA	F-distichus_contig100838 386..1666 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig100838.67.1 ID=prot_F-distichus_contig100838.67.1|Name=mRNA_F-distichus_contig100838.67.1|organism=Fucus distichus monoicous|type=polypeptide|length=119bp
DLAVNSNIGSAGESIQSVNQEIRRTSGMRRGVVYSAGGFVLVLSLLYVLV
GFYALRKDDGNGKAGGARMRGPIMMGCLFLPLTLIVILLCWFLFGLSTSL
ALLTADFCVSPVENTVVR*