prot_F-distichus_contig10081.65.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10081.65.1
Unique Nameprot_F-distichus_contig10081.65.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length160
Homology
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BLAST of mRNA_F-distichus_contig10081.65.1 vs. uniprot
Match: A0A6H5KXF7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXF7_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 8.180e-21
Identity = 57/157 (36.31%), Postives = 85/157 (54.14%), Query Frame = 0 
Query:    5 AWPALQSKYQNNSRQRRRALLRRPDNSVMEPETDPDVFLPEINQIRDELGVLDETVSTERLTTIVFDALPDEMYSTVKLQAIRDPDLSLEQIQRMMRTTYINHSERVSVTKKNQESNRYQGSNRKSRETGGRESAM-STALITCQYCKKPGHKVRDC 160
            AW AL  KY+N SRQR++ L ++  N  M+ + DPD F+ ++ ++RDEL +L   +  ++   I+ D LP+E+YS +K +A    DL+LEQ    MR  YIN  E                ++  SR   GR SAM ++   TC +C K GH  + C
Sbjct:  232 AWKALVKKYRNPSRQRQKILFKKLYNMTMDVDMDPDAFMHDMTELRDELQLLGSPIPDDQFMNIILDCLPEELYSGIKYEAETKDDLTLEQALYTMRNLYINRKE----------------ASGSSRAAKGRSSAMVASTTKTCSFCHKKGHLTQHC 372
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10081.65.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXF7_9PHAE8.180e-2136.31Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 3..105
e-value: 3.0E-9
score: 36.7
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 5..160
NoneNo IPR availablePANTHERPTHR34222:SF13coord: 5..160
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 130..160

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 3..105
e-value: 3.0E-9
score: 36.7
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 5..160
NoneNo IPR availablePANTHERPTHR34222:SF13coord: 5..160
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 130..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10081contigF-distichus_contig10081:3177..3656 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10081.65.1mRNA_F-distichus_contig10081.65.1Fucus distichus monoicousmRNAF-distichus_contig10081 3177..3656 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10081.65.1 ID=prot_F-distichus_contig10081.65.1|Name=mRNA_F-distichus_contig10081.65.1|organism=Fucus distichus monoicous|type=polypeptide|length=160bp
DGRQAWPALQSKYQNNSRQRRRALLRRPDNSVMEPETDPDVFLPEINQIR
DELGVLDETVSTERLTTIVFDALPDEMYSTVKLQAIRDPDLSLEQIQRMM
RTTYINHSERVSVTKKNQESNRYQGSNRKSRETGGRESAMSTALITCQYC
KKPGHKVRDC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036875Znf_CCHC_sf