prot_F-distichus_contig100698.59.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig100698.59.1
Unique Name	prot_F-distichus_contig100698.59.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	97

Homology

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BLAST of mRNA_F-distichus_contig100698.59.1 vs. uniprot
Match: D8LHI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHI4_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 1.300e-20
Identity = 43/68 (63.24%), Postives = 54/68 (79.41%), Query Frame = 0

Query:   29 SVMSSLAFKGEDWSCMMQTFFNNISILLGILSVLFNMTHFGVPINVINEVVYQRIVPGMGITLFLGNT 96
            S+MS L+F G +W CM Q FF+N S LLG+L  +FNMT FGVPI +INEVVYQ+I+PG+G+TL  GNT
Sbjct:    3 SMMSYLSFGGVEWGCMSQLFFDNTSTLLGVLGAIFNMTFFGVPIEIINEVVYQKILPGLGVTLVFGNT 70

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BLAST of mRNA_F-distichus_contig100698.59.1 vs. uniprot
Match: A0A8J9SX93_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SX93_PHATR)

HSP 1 Score: 57.0 bits (136), Expect = 9.980e-9
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 0

Query:   38 GEDWSCMMQTFFNNISILLGILSVLFNMTHFGVPINVINEVVYQRIVPGMGITLFLGN 95
            G D     Q FF+N+  LLG+L  + +M +FGV   VINE V+ +IVPG+GI+L +GN
Sbjct:    3 GADMGAWCQLFFDNLGTLLGVLIAVQDMENFGVSRGVINETVFGKIVPGVGISLLVGN 60

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BLAST of mRNA_F-distichus_contig100698.59.1 vs. uniprot
Match: A0A448ZC90_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZC90_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 7.410e-6
Identity = 32/93 (34.41%), Postives = 50/93 (53.76%), Query Frame = 0

Query:    9 QGARKAVRVLFAMPKVIVKGSVMS---SLAFKGEDWSCMMQTFFNNISILLGILSVLFNMTHFG---VPINVINEVVYQRIVPGMGITLFLGN 95
            Q AR+  R        IV+  V+S        G DW    Q FF+N+  LLG L  +  +++ G   V  +V+N++V+ +I PG+G+TL +GN
Sbjct:   13 QEARERRRSSIGSALSIVQDEVVSLKDGFTMSGGDWGSFTQLFFDNLGTLLGALYAIQGLSYMGDISVSEDVMNDIVWGKIAPGVGLTLVIGN 105

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BLAST of mRNA_F-distichus_contig100698.59.1 vs. uniprot
Match: A0A7S4EKF1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EKF1_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 4.800e-5
Identity = 26/73 (35.62%), Postives = 43/73 (58.90%), Query Frame = 0

Query:   29 SVMSSLAFKGEDWSCMMQTFFNNISILLGILSVLFNMTH---FG---VPINVINEVVYQRIVPGMGITLFLGN 95
            S+   +   G DW    Q FF+N+S LLG L  +  ++    FG   V  +V+N++++ +I PG+G+TL +GN
Sbjct:   36 SLKDGMTMSGGDWGSFTQLFFDNLSTLLGALYAIQGLSSKVAFGDIAVSEDVMNDIIWAKIAPGVGVTLIIGN 108

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig100698.59.1 vs. uniprot

BLAST of mRNA_F-distichus_contig100698.59.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D8LHI4_ECTSI	1.300e-20	63.24	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A8J9SX93_PHATR	9.980e-9	48.28	Hypothetical protein (Fragment) n=2 Tax=Phaeodacty...	[more]
A0A448ZC90_9STRA	7.410e-6	34.41	Uncharacterized protein n=1 Tax=Pseudo-nitzschia m...	[more]
A0A7S4EKF1_9STRA	4.800e-5	35.62	Hypothetical protein n=1 Tax=Pseudo-nitzschia aust...	[more]

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 71..96
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 14..36
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..13
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 48..70
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 37..47
None	No IPR available	TMHMM	TMhelix		coord: 48..70

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 71..96
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 14..36
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..13
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 48..70
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 37..47
None	No IPR available	TMHMM	TMhelix		coord: 48..70

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig100698	contig	F-distichus_contig100698:1184..2053 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig100698.59.1	mRNA_F-distichus_contig100698.59.1	Fucus distichus monoicous	mRNA	F-distichus_contig100698 1184..2053 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig100698.59.1 ID=prot_F-distichus_contig100698.59.1|Name=mRNA_F-distichus_contig100698.59.1|organism=Fucus distichus monoicous|type=polypeptide|length=97bp
GSERNLLQQGARKAVRVLFAMPKVIVKGSVMSSLAFKGEDWSCMMQTFFN
NISILLGILSVLFNMTHFGVPINVINEVVYQRIVPGMGITLFLGNT*