prot_F-distichus_contig10014.20.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig10014.20.1
Unique Name	prot_F-distichus_contig10014.20.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	207

Homology

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BLAST of mRNA_F-distichus_contig10014.20.1 vs. uniprot
Match: D8LM76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM76_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 3.560e-24
Identity = 65/160 (40.62%), Postives = 91/160 (56.88%), Query Frame = 0

Query:   70 NSEAPVFYIKGLK--GGVGA------------------TRYQGDDAGEGRSQIVTQRSVPGMSETGEIRGMDGE---------DDTPMWDKVQQSLGLGKWSYIGLGLALFMITLNNFLGLGWLGRAINPDFE---LVDVESQRSQIQVMRLDDSSNLIS 197
            +S+AP+ YIKGLK  GGVG                    R  G+ A   R+    +R + G  +  E    +GE         +  P+W+KVQ +LGLG WSY+GLGLA+F+I LNN LG+GW  + INP++E   +++V+ Q  QIQ M LDD+SNL+S
Sbjct:   57 DSDAPILYIKGLKEGGGVGLWGSEDDXXXXXXXXXXXPARGGGNAAMMARALRNAEREIEGGGDYEEGVEEEGEGVGNQEAVVNQMPVWEKVQAALGLGVWSYVGLGLAVFIIVLNNVLGVGWATKIINPEYEPDSVLEVQQQGRQIQYMPLDDASNLLS 216

[Close]

BLAST of mRNA_F-distichus_contig10014.20.1 vs. uniprot
Match: A0A6H5KPT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT2_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.120e-23
Identity = 62/160 (38.75%), Postives = 91/160 (56.88%), Query Frame = 0

Query:   70 NSEAPVFYIKGLKGGVGATRYQGDD--------------AGEGRSQIVT------QRSVPG-------MSETGEIRGMD--GEDDTPMWDKVQQSLGLGKWSYIGLGLALFMITLNNFLGLGWLGRAINPDFE---LVDVESQRSQIQVMRLDDSSNLIS 197
            +S+ P+ YIKGLK G G   +  +D               G G + ++       +R + G       + E GE+ G      +  P+W+KVQ +LGLG WSY+GLGLA+F+I LNN LG+GW  + INP++E   +++V+ Q  QIQ M LDD+SNL+S
Sbjct:  128 DSDVPILYIKGLKEGGGVGLWGSEDDXXXXXXXXXXXXXRGGGNAAMMARALRNAEREIEGGGDYEEGVEEEGEVGGNQEAAVNQMPVWEKVQAALGLGVWSYVGLGLAVFIIVLNNVLGVGWATKIINPEYEPDSVLEVQQQGRQIQYMPLDDASNLLS 287

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig10014.20.1 vs. uniprot

BLAST of mRNA_F-distichus_contig10014.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LM76_ECTSI	3.560e-24	40.63	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KPT2_9PHAE	1.120e-23	38.75	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 141..164
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..140
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 165..206
None	No IPR available	TMHMM	TMhelix		coord: 143..165

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 141..164
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..140
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 165..206
None	No IPR available	TMHMM	TMhelix		coord: 143..165

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig10014	contig	F-distichus_contig10014:3702..10035 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig10014.20.1	mRNA_F-distichus_contig10014.20.1	Fucus distichus monoicous	mRNA	F-distichus_contig10014 3582..10061 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig10014.20.1 ID=prot_F-distichus_contig10014.20.1|Name=mRNA_F-distichus_contig10014.20.1|organism=Fucus distichus monoicous|type=polypeptide|length=207bp
MAILVLFSHESYGWLKPGSRQQHPLPPTKAFPRRVTRIAADSSNDGEGRD
SGAAPGENPKQGQVPPMQNNSEAPVFYIKGLKGGVGATRYQGDDAGEGRS
QIVTQRSVPGMSETGEIRGMDGEDDTPMWDKVQQSLGLGKWSYIGLGLAL
FMITLNNFLGLGWLGRAINPDFELVDVESQRSQIQVMRLDDSSNLISPSS
SSQAVK*