mRNA_F-distichus_contig99456.19389.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig99456.19389.1
Unique NamemRNA_F-distichus_contig99456.19389.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
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BLAST of mRNA_F-distichus_contig99456.19389.1 vs. uniprot
Match: A0A7S2NXK6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NXK6_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 5.470e-15
Identity = 33/42 (78.57%), Postives = 39/42 (92.86%), Query Frame = 1 
Query:    1 WREANGLNKIILCGHSLGGYLGVAYAEKYPQRLERLVLISPV 126
            WREANGL K+IL GHS+GGYL VAYAEKYP+R+E+L+LISPV
Sbjct:  201 WREANGLEKMILGGHSMGGYLSVAYAEKYPERVEKLILISPV 242
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BLAST of mRNA_F-distichus_contig99456.19389.1 vs. uniprot
Match: D8LGP8_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGP8_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.920e-14
Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 1 
Query:    1 WREANGLNKIILCGHSLGGYLGVAYAEKYPQRLERLVLISPVRYIRE 141
            WR+AN ++K++LCGHSLGGYL V YAEKYPQR+++LVL SPV +  E
Sbjct:  199 WRQANEVDKMVLCGHSLGGYLSVCYAEKYPQRIDKLVLASPVGFPEE 245
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BLAST of mRNA_F-distichus_contig99456.19389.1 vs. uniprot
Match: A0A7S1ZLF5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLF5_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.400e-13
Identity = 29/42 (69.05%), Postives = 38/42 (90.48%), Query Frame = 1 
Query:    1 WREANGLNKIILCGHSLGGYLGVAYAEKYPQRLERLVLISPV 126
            WRE N ++K++L GHS+GGY+ VAYAEKYPQR+ERL+L+SPV
Sbjct:  208 WREKNQIDKMMLAGHSMGGYISVAYAEKYPQRVERLILLSPV 249
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BLAST of mRNA_F-distichus_contig99456.19389.1 vs. uniprot
Match: A0A835ZEV4_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEV4_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.770e-13
Identity = 28/42 (66.67%), Postives = 38/42 (90.48%), Query Frame = 1 
Query:    1 WREANGLNKIILCGHSLGGYLGVAYAEKYPQRLERLVLISPV 126
            WR+AN + ++ILCGHSLGGYL VAYAE+YP+R+ +L+L+SPV
Sbjct:  116 WRDANKVQRMILCGHSLGGYLSVAYAERYPERVAKLILVSPV 157
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BLAST of mRNA_F-distichus_contig99456.19389.1 vs. uniprot
Match: A0A7S2MTT7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MTT7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.430e-13
Identity = 27/42 (64.29%), Postives = 37/42 (88.10%), Query Frame = 1 
Query:    1 WREANGLNKIILCGHSLGGYLGVAYAEKYPQRLERLVLISPV 126
            WR+ N + K++L GHS+GGY+ VAYAEKYP+R+ERL+L+SPV
Sbjct:   87 WRKQNQIEKMMLAGHSMGGYMSVAYAEKYPERVERLILLSPV 128
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BLAST of mRNA_F-distichus_contig99456.19389.1 vs. uniprot
Match: A0A7S0CHN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CHN0_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 3.980e-13
Identity = 28/42 (66.67%), Postives = 37/42 (88.10%), Query Frame = 1 
Query:    1 WREANGLNKIILCGHSLGGYLGVAYAEKYPQRLERLVLISPV 126
            WR+ NG++K+IL GHS+GGY+ VAY EKYPQ +ERL+L+SPV
Sbjct:   44 WRKKNGIDKMILGGHSMGGYIAVAYCEKYPQHVERLILLSPV 85
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BLAST of mRNA_F-distichus_contig99456.19389.1 vs. uniprot
Match: A0A7S3LF39_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LF39_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.410e-13
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 1 
Query:    1 WREANGLNKIILCGHSLGGYLGVAYAEKYPQRLERLVLISPVRYIRE 141
            WR ANG+ +++L GHS+GGY+GVAY EKYPQ ++RLVLISP     E
Sbjct:  169 WRRANGVERMVLAGHSMGGYVGVAYCEKYPQHVDRLVLISPAAVSEE 215
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BLAST of mRNA_F-distichus_contig99456.19389.1 vs. uniprot
Match: B7G957_PHATC (Hydrolase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G957_PHATC)

HSP 1 Score: 69.3 bits (168), Expect = 1.570e-12
Identity = 28/42 (66.67%), Postives = 36/42 (85.71%), Query Frame = 1 
Query:    1 WREANGLNKIILCGHSLGGYLGVAYAEKYPQRLERLVLISPV 126
            WR AN +++++L GHS+GGYL VAY EKYP R+ERL+LISPV
Sbjct:  226 WRHANKIDRMVLAGHSMGGYLSVAYCEKYPDRVERLILISPV 267
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BLAST of mRNA_F-distichus_contig99456.19389.1 vs. uniprot
Match: A0A6U2HSC8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2HSC8_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.750e-12
Identity = 27/42 (64.29%), Postives = 37/42 (88.10%), Query Frame = 1 
Query:    1 WREANGLNKIILCGHSLGGYLGVAYAEKYPQRLERLVLISPV 126
            WR+ NG+ K++L GHS+GGY+ VAYAEKYP R++RL+L+SPV
Sbjct:   59 WRDKNGIEKMMLGGHSMGGYISVAYAEKYPNRVDRLILLSPV 100
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BLAST of mRNA_F-distichus_contig99456.19389.1 vs. uniprot
Match: A0A7S2Y936_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y936_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.790e-12
Identity = 26/40 (65.00%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:    1 WREANGLNKIILCGHSLGGYLGVAYAEKYPQRLERLVLIS 120
            WR+A G++K+IL GHS+GGY+ VAY EKYP+ +ERL+LIS
Sbjct:   96 WRKAQGVDKMILAGHSMGGYISVAYTEKYPEHVERLILIS 135
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99456.19389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2NXK6_9STRA5.470e-1578.57Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
D8LGP8_ECTSI1.920e-1465.96AB hydrolase-1 domain-containing protein n=2 Tax=E... [more]
A0A7S1ZLF5_9STRA2.400e-1369.05Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A835ZEV4_9STRA2.770e-1366.67Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
A0A7S2MTT7_9STRA3.430e-1364.29Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S0CHN0_9STRA3.980e-1366.67Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7S3LF39_9STRA4.410e-1361.70Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
B7G957_PHATC1.570e-1266.67Hydrolase n=1 Tax=Phaeodactylum tricornutum (strai... [more]
A0A6U2HSC8_9STRA1.750e-1264.29Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2Y936_9STRA2.790e-1265.00Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig99456contigF-distichus_contig99456:44..190 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score76.3
Seed ortholog evalue4.6e-12
Seed eggNOG ortholog2880.D8LGP8
KEGG rclassRC00037,RC00039,RC00094
KEGG koko:K13535,ko:K13699
KEGG ReactionR09038,R09381
KEGG Pathwayko00564,ko04923,map00564,map04923
Hectar predicted targeting categoryno signal peptide or anchor
EggNOG free text desc.1-acylglycerol-3-phosphate O-acyltransferase activity
EggNOG OGsCOG0596@1,KOG4409@2759
EC2.3.1.51
COG Functional cat.EH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01004
Exons1
Model size147
Cds size147
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931176.2908993-CDS-F-distichus_contig99456:43..1901622931176.2908993-CDS-F-distichus_contig99456:43..190Fucus distichus monoicousCDSF-distichus_contig99456 44..190 +
1690886191.5159523-CDS-F-distichus_contig99456:43..1901690886191.5159523-CDS-F-distichus_contig99456:43..190Fucus distichus monoicousCDSF-distichus_contig99456 44..190 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig99456.19389.1prot_F-distichus_contig99456.19389.1Fucus distichus monoicouspolypeptideF-distichus_contig99456 44..190 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig99456.19389.1

>prot_F-distichus_contig99456.19389.1 ID=prot_F-distichus_contig99456.19389.1|Name=mRNA_F-distichus_contig99456.19389.1|organism=Fucus distichus monoicous|type=polypeptide|length=49bp
WREANGLNKIILCGHSLGGYLGVAYAEKYPQRLERLVLISPVRYIREI*
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mRNA from alignment at F-distichus_contig99456:44..190+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig99456.19389.1 ID=mRNA_F-distichus_contig99456.19389.1|Name=mRNA_F-distichus_contig99456.19389.1|organism=Fucus distichus monoicous|type=mRNA|length=147bp|location=Sequence derived from alignment at F-distichus_contig99456:44..190+ (Fucus distichus monoicous)
TGGCGCGAGGCCAACGGATTGAACAAGATTATCCTTTGTGGGCATTCGCT
AGGGGGCTATCTTGGGGTCGCGTACGCCGAGAAATACCCGCAACGGCTCG
AGAGGCTAGTGCTGATCAGTCCGGTGAGGTACATTAGAGAAATATGA
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Coding sequence (CDS) from alignment at F-distichus_contig99456:44..190+

>mRNA_F-distichus_contig99456.19389.1 ID=mRNA_F-distichus_contig99456.19389.1|Name=mRNA_F-distichus_contig99456.19389.1|organism=Fucus distichus monoicous|type=CDS|length=294bp|location=Sequence derived from alignment at F-distichus_contig99456:44..190+ (Fucus distichus monoicous)
TGGCGCGAGGCCAACGGATTGAACAAGATTATCCTTTGTGGGCATTCGCT
AGGGGGCTATCTTGGGGTCGCGTACGCCGAGAAATACCCGCAACGGCTCG
AGAGGCTAGTGCTGATCAGTCCGGTGAGGTACATTAGAGAAATATGATGG
CGCGAGGCCAACGGATTGAACAAGATTATCCTTTGTGGGCATTCGCTAGG
GGGCTATCTTGGGGTCGCGTACGCCGAGAAATACCCGCAACGGCTCGAGA
GGCTAGTGCTGATCAGTCCGGTGAGGTACATTAGAGAAATATGA
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