mRNA_F-distichus_contig9812.19251.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig9812.19251.1
Unique NamemRNA_F-distichus_contig9812.19251.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig9812.19251.1 vs. uniprot
Match: A0A454XPC7_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A454XPC7_OSTTA)

HSP 1 Score: 140 bits (353), Expect = 5.650e-37
Identity = 80/198 (40.40%), Postives = 110/198 (55.56%), Query Frame = 1
Query:    1 FQKTNGFVIKFNTEGVDQLRQDSALSALTDYFDRVQDPFANAWVLNVLVCMPQDLEAEDEAGRPQGLLELPLSVSPHIDETLGTSSRDAFMAHVVNVLYVSIPEHMSGGRLEMYGYSWLREKLFPVLPPDAGVDPTENTLVSFRGDAIHRVQGFRVRDTGDVSGTVEDHHRVSVVLEQYRVPMLSYSLTTEYDLSAGS 594
            F KT GFV+KFN +GV++ R     +   D FDR++ P  NA+V+NVL+C  QD  A D  G   GL         H+D+T+G  S+  F+AH V+VLYVS+PE M GG+LE++ Y          + P   V+P EN + +FRGDA HRV+ +R R   +         RVS+VLEQY +    Y  T  +  S  S
Sbjct:  131 FGKTRGFVLKFNEDGVERFRSKKEYACFVDVFDRLRAPLTNAFVMNVLLCELQDYSAYDANGMAVGL---------HLDDTVGIFSKHEFVAHQVSVLYVSVPEDMEGGQLELFPYG--NGSTPENVEPTEAVEPKENLMATFRGDAFHRVRAYRTRSKRE---------RVSLVLEQYHIGDNHYPKTITFSESLKS 308          
BLAST of mRNA_F-distichus_contig9812.19251.1 vs. uniprot
Match: A0A5J4YPS6_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPS6_PORPP)

HSP 1 Score: 130 bits (328), Expect = 2.360e-33
Identity = 80/194 (41.24%), Postives = 111/194 (57.22%), Query Frame = 1
Query:    1 FQKTNGFVIKFNTEGVDQLRQDSALSALTDYFDRVQDPFANAWVLNVLVCMPQDLEAEDEAGRPQGLLELPLSVSPHIDETLGTSSRDA-FMAHVVNVLYVSIPEHMSGGRLEMYGYSWLREKLFPVLPP-DAGVDPTENTLVSFRGDAIHRVQGFRVRDTGDVSGTVEDHHRVSVVLEQYRVPMLSYSLTTEY 576
            F+ T GF +KFN +GV Q + D A++ L  YF+R      NAWV+NVLVC  ++ +AE             +SV  H+D T+G       F+AHVV+VLYVSIP  M GG L ++ Y      + P +   D  + P EN  VSFRGDA H V+GF++ +  DV    +D  R+S+V+EQY++P L Y  T  Y
Sbjct:  121 FKGTYGFAVKFNNDGVQQFKDDPAMACLVPYFERAVRNDTNAWVVNVLVC--EETQAE-------------VSVGIHVDNTVGIHVPVLRFLAHVVDVLYVSIPRDMQGGSLVIWNYGSGPSIVAPTIDSADREIVPRENHRVSFRGDAFHTVRGFQIPE--DVPK--QDRLRISLVIEQYKIPSLFYRRTDTY 295          
BLAST of mRNA_F-distichus_contig9812.19251.1 vs. uniprot
Match: A0A7S0WM43_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WM43_9CHLO)

HSP 1 Score: 129 bits (324), Expect = 1.000e-32
Identity = 78/192 (40.62%), Postives = 110/192 (57.29%), Query Frame = 1
Query:    1 FQKTNGFVIKFNTEGVDQLRQDSALSALTDYFDRVQDPFANAWVLNVLVCMPQDLEAEDEAGRPQGLLELPLSVSPHIDETLGTSSRDAFMAHVVNVLYVSIPEHMSGGRLEMYGYSWLREKLFPVLPPDAGVDPTENTLVSFRGDAIHRVQGFRVRDTGDVSGTVEDHHRVSVVLEQYRVPMLSYSLTTEY 576
            F KT GFV+KFNTEGVD+ +     +   + FD ++ P ANA+V+N+L+C   +L   D+    +      LSV  H+D T+G  SR  F+AH V+VLY S+P  M GG LE++ Y     +L     P+  + P ENTLV+FRGDA H+V+ +  R TG          RVS+VLEQY++    Y  T  +
Sbjct:  128 FSKTRGFVVKFNTEGVDEFKAKEEYACFREVFDDIRLPDANAFVMNILLC---ELGDYDQYNADE------LSVGLHLDTTVGIYSRHMFIAHQVSVLYASVPNDMRGGALEVFPYGDGDPRLGAT--PEEVIAPKENTLVTFRGDAFHQVKSYSTR-TGK--------ERVSLVLEQYKIDDEMYPKTLRF 299          
BLAST of mRNA_F-distichus_contig9812.19251.1 vs. uniprot
Match: L1JCM3_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JCM3_GUITC)

HSP 1 Score: 108 bits (270), Expect = 2.300e-25
Identity = 73/192 (38.02%), Postives = 99/192 (51.56%), Query Frame = 1
Query:    1 FQKTNGFVIKFNTEGVDQLRQD---SALSALTDYFDRVQDPFANAWVLNVLVCMPQDLEAEDEAGRPQGLLELPLSVSPHIDETLGTSSRDAFMAHVVNVLYVSIPEHMSGGRLEMYGYSWLREKLFPVLPPDAGVDPTENTLVSFRGDAIHRVQGFRVRDTGDVSGTVEDHHRVSVVLEQYRVPMLSYSLT 567
            F  T GFVI FN +G+D+ ++D     L  +T YFDR     ANA+V+N+LVC     E++             + V+ HID T+ +       AH VNVLY+S+           + YS    ++    PPD  V P ENT+V+FRGDA HRV G+R         T     R+S+VLEQY+VP    SLT
Sbjct:   75 FSATKGFVIAFNRKGIDRFKKDVRFECLHVVTPYFDRALYAGANAFVMNLLVCHTPTNESD-------------VVVNLHIDNTIQSWWVGEIFAHQVNVLYISV-----------FKYSKTVPEIANPPPPDEEVFPQENTMVAFRGDAYHRVMGYR---------TQIQKKRISLVLEQYQVPSWVESLT 233          
BLAST of mRNA_F-distichus_contig9812.19251.1 vs. uniprot
Match: A0A5J4Z2V2_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2V2_PORPP)

HSP 1 Score: 102 bits (254), Expect = 5.090e-22
Identity = 72/201 (35.82%), Postives = 105/201 (52.24%), Query Frame = 1
Query:    1 FQKTNGFVIKFNTEGVDQLRQDS-----ALSALTDYFDRVQDPFANAWVLNVLVCMPQDLEAEDEAGRPQGLLELPLSVSPHIDETLGTSSRDA-FMAHVVNVLYVSIPEHMSGGRLEMYGYSWLREKLFPVLPPDAGVDPTENTLVSFRGDAIHRVQGFRVRDTGDVSGTVEDHHRVSVVLEQYRVPMLSYSLTTEYDLS 585
            F+ T GFVIKF+  G+ + R ++     + + L  +FD+ +D  AN +V+NVLV           A +P    EL   V  H+D TL  S  +  F+AH V VLY+S+P  M GG LE+ G     E+    +   + + P +N    FRGDA H+V+G+          T  D  RVS+VLEQYRVP   +   ++Y+ S
Sbjct:  209 FKYTRGFVIKFSDLGIPKFRAETLFNCGSFNPLLPFFDKARDIRANGFVMNVLV-----------ADKPNNASEL--VVGRHVDNTLKHSRPNTDFLAHTVTVLYLSVPPDMEGGELEVLGTREQYEEGGGTVK--SRITPVQNKGARFRGDAYHQVRGYT---------TETDQRRVSLVLEQYRVPRRFHRYLSKYEHS 385          
BLAST of mRNA_F-distichus_contig9812.19251.1 vs. uniprot
Match: R1FFX3_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FFX3_EMIHU)

HSP 1 Score: 84.7 bits (208), Expect = 9.290e-17
Identity = 72/211 (34.12%), Postives = 96/211 (45.50%), Query Frame = 1
Query:   16 GFVIKFNTEGVDQLR--QDSALSA------LTDYFDRVQDPFANAWVLNVLVCMPQDLEAEDEAGRPQGLLELPLSVSPHIDETLGTSSRDAFMAHVVNVLYVSIPEHMSGGRLEMYGYSW----------LREKLFPVLPP--DAGVDPTENTLVSFRGDAIHRVQGFRVRDTGDVSGTVEDHHRVSVVLEQYRVPMLSYSLTTEYDLSA 588
            G V+KFN+EG + LR   D+  +A      L    D   DP ANAWVL+VL C      +                        +G  S DA  AH  +VLYV +P  M+GG+LE+                 E +  V  P  +A V P E  +V FRGDA HRV   R   +   +GT     R+SVVLEQYR+P   Y+ T  ++ S+
Sbjct:    9 GLVLKFNSEGREILRGRTDANPAAAQWAACLGPVVDSFADPLANAWVLSVLECQSSPRRSR-----------------------VGLLSPDAHAAHSTHVLYVRVPAAMAGGQLELRRVDLGGGDVAKGITSAEAMRRVEAPLEEAAVAPREGDVVVFRGDAFHRV---RRHTSPAAAGTTTS--RISVVLEQYRIPASRYNRTLRWERSS 191          
BLAST of mRNA_F-distichus_contig9812.19251.1 vs. uniprot
Match: A0A7S2GZD6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GZD6_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.700e-13
Identity = 65/220 (29.55%), Postives = 96/220 (43.64%), Query Frame = 1
Query:    1 FQKTNGFVIKFNTEGVDQLRQDSALSALTDYFDRVQDPFANAWVLNVLVCMPQDLEAEDEAGRPQGLLE---LPLSVSPHIDETLGTSSRDAFMAHVVNVLYV--------------SIP---EHMSGG---RLEMYGYSWLREKLFPVLPPDAGVDPTENTLVSFRGDAIHRVQGFRVRDTGDVSGTVEDHHRVSVVLEQYRVPMLSYSLTTEYDLSAG 591
            F  T G + +FN +G+ + R+++AL+ L   FDR++DP +NA+VLNVL C P          +   ++     P+  +  +     +   D     +  V Y               S P   E +S G    L+      L      +L   A V P E  LV+FRGDA HRV   R            D  R+S+VLEQYR+  + Y  T  Y+ +AG
Sbjct:   56 FGGTRGLMARFNLKGIRKAREEAALACLMPLFDRIRDPASNAFVLNVLDCGPNSSGVGWHVDQSVAIIPDTWAPMHTAHTVSVWYASIPSDMDGGELEIVAYDGGRDGKIKQLGPFNSTPNEGEEISDGCHGLLKRNKPVGLTPNSSSLLTTRARVIPREGALVTFRGDAFHRVLPLRSSHV--------DTSRISIVLEQYRIDPMHYGKTLPYEFTAG 267          
BLAST of mRNA_F-distichus_contig9812.19251.1 vs. uniprot
Match: A0A8J2WTV5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTV5_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.050e-12
Identity = 76/225 (33.78%), Postives = 108/225 (48.00%), Query Frame = 1
Query:    1 FQKTNGFVIKFNT-EGVD----QLRQDSALSALTDYFDRVQDPFANAWVLNVLVCMPQDLEAE---DEAG----------RPQGLLELPLSVSPHIDETLGTS-SRDAF--MAHVVNVLYVSIPEHMSGGRLEMYGYS---WLREKLFPVLPPDAGVDPTENTLVSFRGDAIHRVQGFRVRDTGDVSGTVEDHHRVSVVLEQYRVPMLSYSLTTEYDLSAGSLHD 603
            F  ++GFV++F+   GVD    +L   S    L  +F R  D     +VLNVLV  P + E E   DE            + +  ++   +V  H D TLG     DA   +AH V+VLYV++PE  +GG L +       W  E+   V+  D  V P +N L  FRGDA H V+  RV +      +    HRVS+VLEQYRVP      T  +++  G  ++
Sbjct:  228 FAGSSGFVVRFDGWGGVDATAKKLWVRSETRPLVPFFRRCADKECTGFVLNVLVVAPAEDEEEVVVDENAPEAVKLLLRKKAEESIDEQYAVGWHRDATLGLKPGADAAPPLAHRVSVLYVAVPE-ATGGELCLRNADRPPWRSER--GVI--DREVAPKQNRLAVFRGDAEHAVR--RVTNVTKADASFPKGHRVSLVLEQYRVPPGLREFTMHFEIVEGKDYE 445          
BLAST of mRNA_F-distichus_contig9812.19251.1 vs. uniprot
Match: A0A085WGD9_9DELT (Fe2OG dioxygenase domain-containing protein n=1 Tax=Hyalangium minutum TaxID=394096 RepID=A0A085WGD9_9DELT)

HSP 1 Score: 73.2 bits (178), Expect = 2.890e-12
Identity = 59/181 (32.60%), Postives = 80/181 (44.20%), Query Frame = 1
Query:    1 FQKTNGFVIKFNTEGVDQLRQDSALSALTDYFDRVQDPFANAWVLNVLVCMPQDLEAEDEAGRPQGLLELPLSVSPHIDETLGTSSRDAFMAHVVNVLYVSIPEHMSGGRLEMYGYSWLREKLFPVLPPDAGVDPTENTLVSFRGDAIHRVQGFRVRDTGDVSGTVEDHHRVSVVLEQYRV 543
            F  T GF   F  E + Q+   +   A   YF+ V  P  NA++LN L+          + GR          V+ H+D++LG           V+VLYV +PE +SGG+L          +LF      A V P   TLV+FRGD +H V              V    R+S+VLEQYRV
Sbjct:   51 FSGTYGFSFIFQREALSQVT--ARFPAFVPYFEAVLLPDCNAFLLNPLLI---------QNGR---------GVNAHLDQSLGVYGSSYSCPTAVSVLYVQVPEDLSGGQL----------RLFHRGKEVAAVSPRPRTLVTFRGDLVHEVAPVAA------GAPVLSSARISLVLEQYRV 195          
BLAST of mRNA_F-distichus_contig9812.19251.1 vs. uniprot
Match: A0A8J9RLE1_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RLE1_9CHLO)

HSP 1 Score: 73.9 bits (180), Expect = 4.230e-12
Identity = 63/191 (32.98%), Postives = 90/191 (47.12%), Query Frame = 1
Query:   13 NGFVIKFNTEGVDQL-------RQDSALSALTDYFDRVQDPFANAWVLNVLVCMPQDLEAEDEAGRPQGLLELPLSVSPHIDETL--GTSSRDAFMA-HVVNVLYVSIPEHMSGGRLEMYGYSWLREKLFPVL-PPDAGVDPTENTLVSFRGDAIHRVQGFRVRDTGDVSGTVEDHHRVSVVLEQYRVPML 552
            N   + F+  G +QL        + + L AL  +   ++ P ANAW LNV+   P+ +     +G PQ          PHID     G + R   +A +  +VLY+S+P+ M GG L +    W ++ L   L  P   + P +N LVSFRGDA HRV  F             +  RVS+ LEQY +P L
Sbjct:  115 NAVNVNFDATGWEQLGLAGSIDEEYAPLEALLLFAKPLRLPRANAWSLNVVFSQPRGVRRAGHSG-PQ---------DPHIDNLRISGPAGRACTVASYQTSVLYLSVPQDMDGGNLTI----WEQQGLGGTLGEPKDFIHPMDNLLVSFRGDAPHRVDEFH-----------SEAMRVSLTLEQYIIPDL 280          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9812.19251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A454XPC7_OSTTA5.650e-3740.40Uncharacterized protein n=2 Tax=Ostreococcus tauri... [more]
A0A5J4YPS6_PORPP2.360e-3341.24Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S0WM43_9CHLO1.000e-3240.63Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
L1JCM3_GUITC2.300e-2538.02Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A5J4Z2V2_PORPP5.090e-2235.82Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
R1FFX3_EMIHU9.290e-1734.12Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S2GZD6_9STRA1.700e-1329.55Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J2WTV5_9STRA1.050e-1233.78Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A085WGD9_9DELT2.890e-1232.60Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A8J9RLE1_9CHLO4.230e-1232.98Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9812contigF-distichus_contig9812:39..1201 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score142.9
Seed ortholog evalue1.8e-31
Seed eggNOG ortholog70448.A0A096P8C5
Hectar predicted targeting categoryother localisation
EggNOG OGs2D3F1@1,2SRBK@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size654
Cds size654
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9812.19251.1prot_F-distichus_contig9812.19251.1Fucus distichus monoicouspolypeptideF-distichus_contig9812 39..1201 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931160.7893806-CDS-F-distichus_contig9812:38..3201622931160.7893806-CDS-F-distichus_contig9812:38..320Fucus distichus monoicousCDSF-distichus_contig9812 39..320 +
1690886184.4663854-CDS-F-distichus_contig9812:38..3201690886184.4663854-CDS-F-distichus_contig9812:38..320Fucus distichus monoicousCDSF-distichus_contig9812 39..320 +
1622931160.8124692-CDS-F-distichus_contig9812:790..8821622931160.8124692-CDS-F-distichus_contig9812:790..882Fucus distichus monoicousCDSF-distichus_contig9812 791..882 +
1690886184.4869447-CDS-F-distichus_contig9812:790..8821690886184.4869447-CDS-F-distichus_contig9812:790..882Fucus distichus monoicousCDSF-distichus_contig9812 791..882 +
1622931160.8323636-CDS-F-distichus_contig9812:921..12011622931160.8323636-CDS-F-distichus_contig9812:921..1201Fucus distichus monoicousCDSF-distichus_contig9812 922..1201 +
1690886184.4999845-CDS-F-distichus_contig9812:921..12011690886184.4999845-CDS-F-distichus_contig9812:921..1201Fucus distichus monoicousCDSF-distichus_contig9812 922..1201 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig9812.19251.1

>prot_F-distichus_contig9812.19251.1 ID=prot_F-distichus_contig9812.19251.1|Name=mRNA_F-distichus_contig9812.19251.1|organism=Fucus distichus monoicous|type=polypeptide|length=218bp
FQKTNGFVIKFNTEGVDQLRQDSALSALTDYFDRVQDPFANAWVLNVLVC
MPQDLEAEDEAGRPQGLLELPLSVSPHIDETLGTSSRDAFMAHVVNVLYV
SIPEHMSGGRLEMYGYSWLREKLFPVLPPDAGVDPTENTLVSFRGDAIHR
VQGFRVRDTGDVSGTVEDHHRVSVVLEQYRVPMLSYSLTTEYDLSAGSLH
DEERSEERSKVDGEGLS*
back to top

mRNA from alignment at F-distichus_contig9812:39..1201+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig9812.19251.1 ID=mRNA_F-distichus_contig9812.19251.1|Name=mRNA_F-distichus_contig9812.19251.1|organism=Fucus distichus monoicous|type=mRNA|length=1163bp|location=Sequence derived from alignment at F-distichus_contig9812:39..1201+ (Fucus distichus monoicous)
TTTCAGAAAACAAACGGGTTCGTGATAAAGTTCAACACGGAGGGGGTGGA CCAGCTGAGGCAAGACTCCGCCTTATCTGCCCTCACCGACTACTTCGACC GAGTCCAAGACCCGTTCGCGAACGCTTGGGTCCTGAACGTCCTCGTCTGC ATGCCGCAGGATTTGGAAGCGGAAGACGAGGCCGGGAGGCCACAAGGGCT GTTAGAGCTACCTTTGTCGGTTTCGCCTCATATCGACGAGACCCTTGGAA CAAGTTCCAGGGATGCATTCATGGCACACGTTGTGAGAGACTCAGTGTAG ACATAGCGTATTTCGGGGCTGTCAGACCTCTCGTGTGCCCTCACCGCGTC TGACCACATCCCGTGTGCGTGAGGCCTTCCTGTGCAGCATCAAGCCGAAT AAAATTTGCTTGAGCATCTTCTAGCAGGTAGATTCTTGCCTCTGCGTGTT TCGAGATTATGGTCATCATTTGTTTCTCTCCGAAACGACGCAGGAGGATA CCCCAGCAACAAACGCCGCCATTAAGGGGCGTCACAGAACCCTGTGACGC CACCCCCTGTCCTAGAAACAAAAATGCTTTCGAGGGCAGTCATCAGCACG CGTACTTCTATCTCGCGTTTCTCTCTAATGAAGTGATGTTTCAACTCCCA TACCATCCCCCAACTCGTAGCGCCTCCTCTCGACCAATATTTTTTCCCTG GCCCTCTCCGCATGATGACCTCTTGCTGTCTTTCCCCGAACCCAAACGGA AGGTAAATGTGCTGTACGTGTCCATTCCAGAGCACATGTCGGGCGGCCGC CTGGAGATGTACGGGTACAGCTGGCTGCGGGAGAAGCTATTCCCGTATCT GCTGTCGTTCCTCTCCACGCGGCAGCTCGACAGCGTTCTCCCGCCCGACG CTGGCGTCGACCCTACGGAGAACACGCTCGTGTCCTTCCGGGGGGACGCG ATCCACCGTGTTCAGGGTTTCCGCGTCCGTGATACGGGGGACGTTTCGGG TACCGTTGAGGACCACCACCGCGTGAGCGTGGTTTTGGAGCAGTACCGGG TGCCCATGCTATCGTACTCCCTCACGACGGAATACGACCTCTCCGCCGGA TCGTTGCATGACGAGGAACGTTCCGAAGAACGTTCCAAGGTCGACGGAGA AGGCTTGTCGTGA
back to top

Coding sequence (CDS) from alignment at F-distichus_contig9812:39..1201+

>mRNA_F-distichus_contig9812.19251.1 ID=mRNA_F-distichus_contig9812.19251.1|Name=mRNA_F-distichus_contig9812.19251.1|organism=Fucus distichus monoicous|type=CDS|length=1308bp|location=Sequence derived from alignment at F-distichus_contig9812:39..1201+ (Fucus distichus monoicous)
TTTCAGAAAACAAACGGGTTCGTGATAAAGTTCAACACGGAGGGGGTGGA
CCAGCTGAGGCAAGACTCCGCCTTATCTGCCCTCACCGACTACTTCGACC
GAGTCCAAGACCCGTTCGCGAACGCTTGGGTCCTGAACGTCCTCGTCTGC
ATGCCGCAGGATTTGGAAGCGGAAGACGAGGCCGGGAGGCCACAAGGGCT
GTTAGAGCTACCTTTGTCGGTTTCGCCTCATATCGACGAGACCCTTGGAA
CAAGTTCCAGGGATGCATTCATGGCACACGTTTTTCAGAAAACAAACGGG
TTCGTGATAAAGTTCAACACGGAGGGGGTGGACCAGCTGAGGCAAGACTC
CGCCTTATCTGCCCTCACCGACTACTTCGACCGAGTCCAAGACCCGTTCG
CGAACGCTTGGGTCCTGAACGTCCTCGTCTGCATGCCGCAGGATTTGGAA
GCGGAAGACGAGGCCGGGAGGCCACAAGGGCTGTTAGAGCTACCTTTGTC
GGTTTCGCCTCATATCGACGAGACCCTTGGAACAAGTTCCAGGGATGCAT
TCATGGCACACGTTGTAAATGTGCTGTACGTGTCCATTCCAGAGCACATG
TCGGGCGGCCGCCTGGAGATGTACGGGTACAGCTGGCTGCGGGAGAAGCT
ATTCCCGTAAATGTGCTGTACGTGTCCATTCCAGAGCACATGTCGGGCGG
CCGCCTGGAGATGTACGGGTACAGCTGGCTGCGGGAGAAGCTATTCCCCG
TTCTCCCGCCCGACGCTGGCGTCGACCCTACGGAGAACACGCTCGTGTCC
TTCCGGGGGGACGCGATCCACCGTGTTCAGGGTTTCCGCGTCCGTGATAC
GGGGGACGTTTCGGGTACCGTTGAGGACCACCACCGCGTGAGCGTGGTTT
TGGAGCAGTACCGGGTGCCCATGCTATCGTACTCCCTCACGACGGAATAC
GACCTCTCCGCCGGATCGTTGCATGACGAGGAACGTTCCGAAGAACGTTC
CAAGGTCGACGGAGAAGGCTTGTCGTGACGTTCTCCCGCCCGACGCTGGC
GTCGACCCTACGGAGAACACGCTCGTGTCCTTCCGGGGGGACGCGATCCA
CCGTGTTCAGGGTTTCCGCGTCCGTGATACGGGGGACGTTTCGGGTACCG
TTGAGGACCACCACCGCGTGAGCGTGGTTTTGGAGCAGTACCGGGTGCCC
ATGCTATCGTACTCCCTCACGACGGAATACGACCTCTCCGCCGGATCGTT
GCATGACGAGGAACGTTCCGAAGAACGTTCCAAGGTCGACGGAGAAGGCT
TGTCGTGA
back to top