mRNA_F-distichus_contig97815.19224.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig97815.19224.1 vs. uniprot
Match: D7FK55_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK55_ECTSI) HSP 1 Score: 154 bits (390), Expect = 4.330e-46 Identity = 68/80 (85.00%), Postives = 74/80 (92.50%), Query Frame = 1
Query: 1 GAGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPDFEDLSCEFVFGQAAVPVEDDPLMRE 240
G GP Q+ WR+TVK+ERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTP+FEDLSCEF FGQ A+P E+DPLMRE
Sbjct: 89 GEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMRE 168
BLAST of mRNA_F-distichus_contig97815.19224.1 vs. uniprot
Match: A0A6H5L107_9PHAE (D27-like_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L107_9PHAE) HSP 1 Score: 154 bits (390), Expect = 7.990e-43 Identity = 68/80 (85.00%), Postives = 74/80 (92.50%), Query Frame = 1
Query: 1 GAGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPDFEDLSCEFVFGQAAVPVEDDPLMRE 240
G GP Q+ WR+TVK+ERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTP+FEDLSCEF FGQ A+P E+DPLMRE
Sbjct: 441 GEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMRE 520
BLAST of mRNA_F-distichus_contig97815.19224.1 vs. uniprot
Match: A0A835ZB75_9STRA (D27-like_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB75_9STRA) HSP 1 Score: 121 bits (304), Expect = 7.400e-33 Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = 1
Query: 4 AGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPDFEDLSCEFVFGQAAVPVEDDPLMRE 240
AG + WR+ VK+ERCRYLEAS+CKG CMNLCK+PTE FFRE+LGMPL + PDF+DLSC F FG P+ +DPL+ E
Sbjct: 103 AGGGTEVWRAAVKVERCRYLEASRCKGACMNLCKVPTETFFREELGMPLTLVPDFDDLSCTFTFGVEPAPLAEDPLVVE 181
BLAST of mRNA_F-distichus_contig97815.19224.1 vs. uniprot
Match: I0YZA4_COCSC (D27-like_C domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZA4_COCSC) HSP 1 Score: 105 bits (261), Expect = 4.180e-26 Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 16 QQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPDFEDLSCEFVFGQAAVPVEDDPLMRE 240
+Q W+S V+I++CRYLE S C G C+N+CK+PTE FF G+PL M P+FEDLSCE +FGQ A P+E DPL +
Sbjct: 138 KQKWKSGVQIKKCRYLEQSGCIGMCVNMCKIPTEDFFTNQFGLPLTMNPNFEDLSCEMIFGQKAPPIEQDPLYNQ 212
BLAST of mRNA_F-distichus_contig97815.19224.1 vs. uniprot
Match: A0A2V0P9C6_9CHLO (D27-like_C domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P9C6_9CHLO) HSP 1 Score: 105 bits (262), Expect = 4.970e-26 Identity = 46/79 (58.23%), Postives = 61/79 (77.22%), Query Frame = 1
Query: 7 GPSQ-QAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPDFEDLSCEFVFGQAAVPVEDDPLMRE 240
GP Q + RS V I++CRYLE+S C G C N+CK+PT+AFF E+ G+PL M P+FEDLSCE +FGQA PVE+DP+ ++
Sbjct: 164 GPGQVRRQRSVVYIKKCRYLESSGCVGMCTNMCKVPTQAFFTEEFGLPLTMNPNFEDLSCEMIFGQAPPPVEEDPVYQQ 242
BLAST of mRNA_F-distichus_contig97815.19224.1 vs. uniprot
Match: E1Z296_CHLVA (D27-like_C domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z296_CHLVA) HSP 1 Score: 102 bits (254), Expect = 6.580e-26 Identity = 46/74 (62.16%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 19 QAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPDFEDLSCEFVFGQAAVPVEDDPLMRE 240
Q S VKIERCRYL S C G C+NLCK PT+AFF E LGMPL MTP+FEDLSCE VFG+ P+ +DP ++
Sbjct: 71 QQQMSAVKIERCRYLAESGCTGMCINLCKSPTQAFFTEQLGMPLTMTPNFEDLSCEMVFGKRPPPLSEDPAAQQ 144
BLAST of mRNA_F-distichus_contig97815.19224.1 vs. uniprot
Match: A0A8J9WQB3_9CHLO (Beta-carotene isomerase D27, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WQB3_9CHLO) HSP 1 Score: 103 bits (257), Expect = 1.580e-25 Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 16 QQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPDFEDLSCEFVFGQAAVPVEDDPLMRE 240
+Q W+S V+I++CRYLE S C G C+N+CK+PTE FF G+PL M P+FEDLSCE +FGQ A P+E DP+ +
Sbjct: 139 KQKWQSGVQIKKCRYLEQSGCIGMCVNMCKIPTEDFFTNQFGLPLTMNPNFEDLSCEMIFGQRAPPIEQDPVYNQ 213
BLAST of mRNA_F-distichus_contig97815.19224.1 vs. uniprot
Match: A0A7S0R2P5_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0R2P5_9CHLO) HSP 1 Score: 103 bits (257), Expect = 2.960e-25 Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 1 GAGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPDFEDLSCEFVFGQAAVPVEDDPLMRE 240
G ++ RS VKI++CRYLEAS C G C+N+CK+PT++FF E+ G+PL M P+FEDLSCE +FGQA +PVE D +
Sbjct: 161 GPNGEKRQQRSIVKIKKCRYLEASGCVGMCVNMCKIPTQSFFTEEFGLPLTMKPNFEDLSCEMIFGQAPLPVEKDEAFSQ 240
BLAST of mRNA_F-distichus_contig97815.19224.1 vs. uniprot
Match: I6PI01_NITHY (Putative D27 family protein n=1 Tax=Nitella hyalina TaxID=181804 RepID=I6PI01_NITHY) HSP 1 Score: 102 bits (253), Expect = 5.630e-25 Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 1
Query: 31 STVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPDFEDLSCEFVFGQAAVPVEDDPLMRE 240
S VKIE+CRYLE S C G C+N+CKLPT+ FF D G+PL M PD+ED+SCE +FGQA P E+DP +++
Sbjct: 150 SGVKIEKCRYLENSGCVGMCINMCKLPTQDFFTNDFGLPLTMNPDYEDMSCEMIFGQAPPPPEEDPALKQ 219
BLAST of mRNA_F-distichus_contig97815.19224.1 vs. uniprot
Match: A0A068UXA2_COFCA (D27-like_C domain-containing protein n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068UXA2_COFCA) HSP 1 Score: 100 bits (250), Expect = 6.230e-25 Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 1
Query: 28 RSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPDFEDLSCEFVFGQAAVPVEDDPLMRE 240
RS V+I++CRYLE S C G C+N+CK+PT+ FF ++ G+PL MTP+FED+SCE V+GQA P EDDP ++
Sbjct: 106 RSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTDEFGLPLTMTPNFEDMSCEMVYGQAPPPFEDDPASKQ 176 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig97815.19224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig97815.19224.1 >prot_F-distichus_contig97815.19224.1 ID=prot_F-distichus_contig97815.19224.1|Name=mRNA_F-distichus_contig97815.19224.1|organism=Fucus distichus monoicous|type=polypeptide|length=80bp GAGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLback to top mRNA from alignment at F-distichus_contig97815:1205..1912+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig97815.19224.1 ID=mRNA_F-distichus_contig97815.19224.1|Name=mRNA_F-distichus_contig97815.19224.1|organism=Fucus distichus monoicous|type=mRNA|length=708bp|location=Sequence derived from alignment at F-distichus_contig97815:1205..1912+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig97815:1205..1912+ >mRNA_F-distichus_contig97815.19224.1 ID=mRNA_F-distichus_contig97815.19224.1|Name=mRNA_F-distichus_contig97815.19224.1|organism=Fucus distichus monoicous|type=CDS|length=480bp|location=Sequence derived from alignment at F-distichus_contig97815:1205..1912+ (Fucus distichus monoicous)back to top |