mRNA_F-distichus_contig9737.19190.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig9737.19190.1
Unique NamemRNA_F-distichus_contig9737.19190.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: D8LRU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU0_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 9.700e-111
Identity = 204/244 (83.61%), Postives = 214/244 (87.70%), Query Frame = 1
Query:   19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGAI--LAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRRGT 744
            SVFGKKKPLKEILRENKRTIT+AVRDIDREK+NLEKQEKKLVGEIKKNAKAGQMGA+  LAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMA AMKDVTKAMVSLNKQVNVPALQKIM+EFARENERSE+TG           A+DGDAEAED+IVSQVLDEIGV+F EGVPEAPT G+AQG A   E+ARQPVA      XXXXXXXXXXXXXXXX   DA MSELEARLNNLRRGT
Sbjct:    6 SVFGKKKPLKEILRENKRTITRAVRDIDREKANLEKQEKKLVGEIKKNAKAGQMGAVKVLAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMAGAMKDVTKAMVSLNKQVNVPALQKIMLEFARENERSELTGXXXXXXXXXXXADDGDAEAEDQIVSQVLDEIGVSFDEGVPEAPTAGVAQGAAGSAEAARQPVAXXXXXXXXXXXXXXXXXXXXXXG--DAGMSELEARLNNLRRGT 247          
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A835Z6L9_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6L9_9STRA)

HSP 1 Score: 286 bits (731), Expect = 2.520e-94
Identity = 180/245 (73.47%), Postives = 200/245 (81.63%), Query Frame = 1
Query:   19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGAI--LAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGC--DANMSELEARLNNLRRG 741
            +V GKKKPLKEI+RENKRTI +A+R++DREK+NLEKQEKK++ E+KK A A QMGA+  LAKDLVRTRNYVTKFIEFRSHLQGV LKLE VRSHEAMASAMKDVTKAMV LNKQVNVPALQKIM+EFARENER EMT EL+GD LDD +  +GDA+AED IV+QVLDEIG+T GE VP AP  G A   AA   + +Q V       XXXXXXXXXXXXXXXX     DA MSELEARLNNLRRG
Sbjct:    3 NVMGKKKPLKEIMRENKRTINRAIRELDREKTNLEKQEKKIISEMKKAAAANQMGAVRVLAKDLVRTRNYVTKFIEFRSHLQGVALKLEVVRSHEAMASAMKDVTKAMVQLNKQVNVPALQKIMMEFARENERQEMTSELMGDALDDVMNEEGDADAEDAIVNQVLDEIGITMGENVPVAPQGGGALDTAAEPAAQKQQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAQMSELEARLNNLRRG 247          
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A8J2SQU1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQU1_9STRA)

HSP 1 Score: 239 bits (610), Expect = 3.640e-76
Identity = 154/242 (63.64%), Postives = 188/242 (77.69%), Query Frame = 1
Query:   19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRR 738
            + +G+K PLKE+LR+NKR I KAVR++DRE++NLEKQE KLV +IKK AK GQMG   I+AKDLVRTR Y+TKFIE RSHL  V LKL+TV+S EAMA AMK VT+AMV +NK VN+P++QKIMV F  ENER+EMT E++GD LDDA+A DGD++ E+KIV  VLDEIG++FG+ +P+AP   MA  P A       PVA   A GXXXXXXXXXXXXXXX    D  +S+LEARLNNLR+
Sbjct:    3 NTWGRKVPLKEVLRKNKREINKAVRELDRERANLEKQELKLVADIKKYAKDGQMGPVKIMAKDLVRTRTYITKFIELRSHLNAVALKLQTVKSQEAMARAMKSVTEAMVRMNKTVNIPSIQKIMVNFQVENERAEMTQEVMGDMLDDAMAEDGDSDEEEKIVGAVLDEIGISFGDTIPDAPDA-MAARPQAA------PVAVADAVGXXXXXXXXXXXXXXX----DTTVSDLEARLNNLRK 233          
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A7S3K1A5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1A5_9STRA)

HSP 1 Score: 238 bits (607), Expect = 9.400e-76
Identity = 133/242 (54.96%), Postives = 172/242 (71.07%), Query Frame = 1
Query:   19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRR 738
            + +G++ PLKE+LR+NKR I KA+R++D+E+ NLEKQE+KL+ +I+K AK GQMG   I+AKDLVRTR Y+TKFIE RSHL  V LKL+TV+S EAMASAMK VT AM+ +NK VNVP +QKIM+ F RENER+E+T E++GD LDDA+  +GD E ++KIV QVLDEIG+ FG+ VPEAPT+   Q  AA   +  Q  A   + G                 G D  +S+LE RLNNLR+
Sbjct:    3 NAWGRQVPLKEVLRKNKREIQKAIRELDKERGNLEKQEQKLIADIRKFAKEGQMGPVKIMAKDLVRTRTYITKFIELRSHLNAVSLKLQTVKSQEAMASAMKSVTTAMIRMNKAVNVPTVQKIMLNFQRENERAELTQEVMGDLLDDAMEEEGDEEEQEKIVGQVLDEIGINFGDSVPEAPTI---QAQAATEPATNQKTAEPASIGAPSGGG-----------GGDHTVSDLEVRLNNLRK 230          
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: F0XW09_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW09_AURAN)

HSP 1 Score: 237 bits (605), Expect = 1.890e-75
Identity = 143/243 (58.85%), Postives = 180/243 (74.07%), Query Frame = 1
Query:   19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDAN-MSELEARLNNLRR 738
            + +G+K PLKE+LR+NKR I KA+R++DRE++NLEKQE+KL+ +IKK A  GQMG+  I+AKDLVRTR Y+TKFIE RSHL  V LKL+TV+S EAMASAMK VT+AM+ +NK VNVPA+QKIM+ F  ENER+EMT E++GD LDDA+  DGD E E+KIV  VLDEIG++FG+ VP APT+   Q  AA   +A  PVA   A              XXXX   DA+ +S+LEARLNNLR+
Sbjct:    3 NTWGRKVPLKEVLRKNKREINKAMRELDRERANLEKQEQKLIADIKKYAGQGQMGSVKIMAKDLVRTRTYITKFIELRSHLGAVSLKLQTVKSQEAMASAMKSVTQAMIKMNKTVNVPAVQKIMMNFQLENERAEMTQEMMGDMLDDAMEQDGDEEEEEKIVGAVLDEIGISFGDTVPAAPTLAPNQPQAADVPAA--PVAVADAX-------------XXXXXXADASTVSDLEARLNNLRK 230          
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A448ZIR9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZIR9_9STRA)

HSP 1 Score: 224 bits (572), Expect = 1.660e-70
Identity = 129/243 (53.09%), Postives = 168/243 (69.14%), Query Frame = 1
Query:   19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEA-PTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRR 738
            ++ GK+KPLKE+LRENKR I +A+R++DREK+ LE++EK+L  EIKK AK GQMG   I+AKDLVRTR Y+TKFIE RSHLQG  LKL+TV+SH AMA AMK   KAM  +NK V+VPA+ K+M +F REN ++E+  E++GDT+DDAL  + + E E  +V+QVLDEIG++FGE +P A PT      P  V+E+A     A+ A G                   D  +SELEARLNNL+R
Sbjct:    3 NILGKEKPLKEVLRENKRMINRAIRELDREKNGLEREEKRLTLEIKKAAKEGQMGPVNIMAKDLVRTRQYITKFIEMRSHLQGCALKLQTVKSHHAMADAMKSTAKAMHKMNKAVDVPAINKMMQDFERENAKTEIMQEIMGDTIDDALGGEENEEEEXAVVNQVLDEIGISFGEDLPSAAPTA-----PVGVSEAASPGKVAMSASGGGGDM--------------DPQLSELEARLNNLKR 226          
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A1E7FZX6_9STRA (Snf7-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FZX6_9STRA)

HSP 1 Score: 221 bits (564), Expect = 2.790e-69
Identity = 125/242 (51.65%), Postives = 161/242 (66.53%), Query Frame = 1
Query:   19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRR 738
            ++ GK KPLKE+LRENKR IT+A+R++DREK+ LE++EKKL  EIKK AKAGQMG   I+AKDLVRTR Y+TKFIE RSHLQG  LKL+TV+SH AMA AMK    AM  +NK V+VPA+ K+M +F +EN ++EM  E++GD +DD L  + + E E+ IV+QVLDEIG++FGE +P A                  P  A+GA+                    D  +SELEARLNNL+R
Sbjct:    3 NILGKDKPLKEVLRENKRMITRAIRELDREKTGLEREEKKLTMEIKKCAKAGQMGPVKIMAKDLVRTRQYITKFIEMRSHLQGCALKLQTVKSHHAMAEAMKSTASAMHKMNKAVDVPAINKMMQDFEKENMKTEMMQEIMGDAIDDVLGGEENEEEEEAIVNQVLDEIGISFGEDLPSA-----------------APTNAIGAQESAPTGKVAMSETPGGGPSDDPALSELEARLNNLKR 227          
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A7S1BRV2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRV2_9STRA)

HSP 1 Score: 220 bits (560), Expect = 9.580e-69
Identity = 126/244 (51.64%), Postives = 169/244 (69.26%), Query Frame = 1
Query:   19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPT--VGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRR 738
            +VFGK K LKE++RENKR I K++R++DREK+ LEK+EK+L+ +IKK AKAGQ  +  I+AKDLVRTR Y+TKFIE RSHLQGV LKL+TV+S  AMA AM    K+M+  NK +++P + K+M +F +ENE+SE+  E++GD +DD L  +GDAE  +KIVSQVLDEIG+ F E +P+AP    G++  P   TES  QP A +GA                     DA  ++LEARLNNL++
Sbjct:    3 AVFGKGKTLKEVIRENKREINKSIRELDREKNALEKEEKRLITDIKKQAKAGQHNSVRIMAKDLVRTRQYITKFIEMRSHLQGVALKLQTVKSQTAMAEAMTAAGKSMMKFNKAIDIPRINKMMADFMKENEKSELVQEMLGDAIDDTLEQEGDAEETEKIVSQVLDEIGIDFDENIPDAPLKPAGVSATP---TESKAQPEA-IGAN--------------------DAAFNDLEARLNNLKK 222          
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A7S1U260_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U260_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.330e-66
Identity = 140/237 (59.07%), Postives = 178/237 (75.11%), Query Frame = 1
Query:   28 GKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNL 732
            G+ KPLKE+LRE KR IT+AVR+++RE+  LEKQE +L  +IKK  +AGQM +  I+AKDL+RT+NY+T+FIE +SHLQGV L+L+TV+SHEA+ASAM+ V+KAMV +NK+V VP L KIM +F RENER+E+TGEL+GD +DD LA + D E E+K+VSQVL E+ +     + EAPT      PAA      +  AAVG   XXXXXXXXXXXXXXXX      M+ELEARLNNL
Sbjct:   36 GRSKPLKEVLREQKRQITRAVREMEREQRGLEKQENQLKKDIKKACEAGQMKSVKIMAKDLIRTKNYITRFIEMKSHLQGVSLQLQTVKSHEALASAMRSVSKAMVRMNKEVKVPQLNKIMQDFVRENERAELTGELLGDLIDDTLAGENDEEEEEKVVSQVLAELNIDTAGILDEAPT----SLPAAAEAGEEKTAAAVGVGXXXXXXXXXXXXXXXXXXXXXXXMAELEARLNNL 268          
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: W7T515_9STRA (Charged multivesicular body protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T515_9STRA)

HSP 1 Score: 214 bits (545), Expect = 2.620e-66
Identity = 129/237 (54.43%), Postives = 155/237 (65.40%), Query Frame = 1
Query:   34 KKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGAI--LAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRR 738
            KKPLKEI+RENKR I +A+R++DRE++NLEK EKKL+ +IKK AK  QMGA+  +AKDLVRTRNY TKFIE RSHLQG  LKLETVRSHEAMASAM+ VT AMVS+NKQVNVPAL KIM +FARENE+SE+T                    +++IV  VL E+G+   + VPEAP         AV  +A    AA  + G                 G D  M++LEARLNNLRR
Sbjct:   15 KKPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTXXXXXXXXXXXXXXXXXXXXQERIVGAVLTELGLDMTDAVPEAP--------GAVPNTATATAAATSSGGQREPQAL----------GADPTMTDLEARLNNLRR 233          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRU0_ECTSI9.700e-11183.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z6L9_9STRA2.520e-9473.47Snf7-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A8J2SQU1_9STRA3.640e-7663.64Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3K1A5_9STRA9.400e-7654.96Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0XW09_AURAN1.890e-7558.85Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A448ZIR9_9STRA1.660e-7053.09Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7FZX6_9STRA2.790e-6951.65Snf7-domain-containing protein n=1 Tax=Fragilariop... [more]
A0A7S1BRV2_9STRA9.580e-6951.64Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1U260_9STRA1.330e-6659.07Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
W7T515_9STRA2.620e-6654.43Charged multivesicular body protein n=3 Tax=Monodo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9737contigF-distichus_contig9737:6585..9551 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score329.7
Seed ortholog evalue1.2e-87
Seed eggNOG ortholog2880.D8LRU0
Preferred nameCHMP2A
KEGG rclassRC00822
KEGG koko:K01598,ko:K12191
KEGG ReactionR03269
KEGG Pathwayko00770,ko01100,ko04144,ko04217,map00770,map01100,map04144,map04217
KEGG ModuleM00120,M00412
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000815,GO:0000819,GO:0000920,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005768,GO:0005770,GO:0005771,GO:0005829,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006900,GO:0006914,GO:0006996,GO:0006997,GO:0006998,GO:0007032,GO:0007034,GO:0007049,GO:0007059,GO:0007080,GO:0007088,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0008593,GO:0009056,GO:0009057,GO:0009966,GO:0009968,GO:0009987,GO:0010008,GO:0010256,GO:0010324,GO:0010458,GO:0010564,GO:0010639,GO:0010646,GO:0010648,GO:0010824,GO:0010826,GO:0010941,GO:0010948,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0017157,GO:0019058,GO:0019068,GO:0019538,GO:0019904,GO:0019941,GO:0022402,GO:0022411,GO:0022607,GO:0023051,GO:0023057,GO:0030117,GO:0030163,GO:0031090,GO:0031210,GO:0031410,GO:0031468,GO:0031967,GO:0031975,GO:0031982,GO:0032507,GO:0032509,GO:0032511,GO:0032879,GO:0032886,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034067,GO:0034613,GO:0034622,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0040012,GO:0040017,GO:0042058,GO:0042059,GO:0042221,GO:0042493,GO:0042886,GO:0043162,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043328,GO:0043632,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0045053,GO:0045184,GO:0045185,GO:0045324,GO:0045746,GO:0045786,GO:0045921,GO:0046599,GO:0046600,GO:0046605,GO:0046606,GO:0046618,GO:0046755,GO:0046907,GO:0048285,GO:0048475,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048583,GO:0048585,GO:0050000,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0050997,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051235,GO:0051258,GO:0051259,GO:0051260,GO:0051276,GO:0051291,GO:0051301,GO:0051303,GO:0051310,GO:0051493,GO:0051494,GO:0051503,GO:0051603,GO:0051640,GO:0051641,GO:0051649,GO:0051651,GO:0051656,GO:0051704,GO:0051726,GO:0051783,GO:0060236,GO:0060548,GO:0060627,GO:0061024,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070405,GO:0070507,GO:0070676,GO:0070727,GO:0070925,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0090169,GO:0090224,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098813,GO:0140014,GO:1901184,GO:1901185,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1901673,GO:1902115,GO:1902116,GO:1902186,GO:1902188,GO:1903047,GO:1903530,GO:1903532,GO:1903541,GO:1903543,GO:1903722,GO:1903723,GO:1903900,GO:1903902,GO:1904669,GO:1904896,GO:1904903
EggNOG free text desc.vacuolar transport
EggNOG OGsCOG5491@1,KOG3230@2759
Ec32 ortholog descriptionSnf7 family
Ec32 orthologEc-08_002430.1
EC4.1.1.36
COG Functional cat.N
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Exons4
Model size747
Cds size747
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9737.19190.1prot_F-distichus_contig9737.19190.1Fucus distichus monoicouspolypeptideF-distichus_contig9737 6585..9551 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931153.5717163-CDS-F-distichus_contig9737:6584..68271622931153.5717163-CDS-F-distichus_contig9737:6584..6827Fucus distichus monoicousCDSF-distichus_contig9737 6585..6827 -
1690886181.3988667-CDS-F-distichus_contig9737:6584..68271690886181.3988667-CDS-F-distichus_contig9737:6584..6827Fucus distichus monoicousCDSF-distichus_contig9737 6585..6827 -
1622931153.5863175-CDS-F-distichus_contig9737:7064..72141622931153.5863175-CDS-F-distichus_contig9737:7064..7214Fucus distichus monoicousCDSF-distichus_contig9737 7065..7214 -
1690886181.4188514-CDS-F-distichus_contig9737:7064..72141690886181.4188514-CDS-F-distichus_contig9737:7064..7214Fucus distichus monoicousCDSF-distichus_contig9737 7065..7214 -
1622931153.604565-CDS-F-distichus_contig9737:8171..83391622931153.604565-CDS-F-distichus_contig9737:8171..8339Fucus distichus monoicousCDSF-distichus_contig9737 8172..8339 -
1690886181.4290712-CDS-F-distichus_contig9737:8171..83391690886181.4290712-CDS-F-distichus_contig9737:8171..8339Fucus distichus monoicousCDSF-distichus_contig9737 8172..8339 -
1622931153.6212068-CDS-F-distichus_contig9737:9365..95511622931153.6212068-CDS-F-distichus_contig9737:9365..9551Fucus distichus monoicousCDSF-distichus_contig9737 9366..9551 -
1690886181.4477744-CDS-F-distichus_contig9737:9365..95511690886181.4477744-CDS-F-distichus_contig9737:9365..9551Fucus distichus monoicousCDSF-distichus_contig9737 9366..9551 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig9737.19190.1

>prot_F-distichus_contig9737.19190.1 ID=prot_F-distichus_contig9737.19190.1|Name=mRNA_F-distichus_contig9737.19190.1|organism=Fucus distichus monoicous|type=polypeptide|length=249bp
MKAAFSSVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGE
IKKNAKAGQMGAILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEA
MASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLD
DALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESA
RQPVAAVGAEGGASGGGGGGGGGASGGDGCDANMSELEARLNNLRRGT*
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mRNA from alignment at F-distichus_contig9737:6585..9551-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig9737.19190.1 ID=mRNA_F-distichus_contig9737.19190.1|Name=mRNA_F-distichus_contig9737.19190.1|organism=Fucus distichus monoicous|type=mRNA|length=2967bp|location=Sequence derived from alignment at F-distichus_contig9737:6585..9551- (Fucus distichus monoicous)
ATGAAGGCAGCCTTTTCGTCGGTGTTCGGAAAGAAGAAGCCCCTGAAGGA AATTTTGAGAGAAAACAAACGGACGATTACGAAAGCCGTGCGGGACATCG ACCGCGAGAAAAGTAACCTTGAGAAGCAAGAGAAGAAGCTCGTTGGGGAA ATCAAGAAGAACGCCAAAGCGGGGCAGATGGGCGCAGTCAAGGCAAGGAA TCATCATTCTGGGTGCTTCATGTGTGCGTGTCGAGCTTTGTGCTGCTGCT GCTGCCGCCGATCCTGCTTTCGCGTATTTTCTTTCAGAAGTCTATGTTGA TGTTATCCCCACTAATTGCTACCTCTGCTATTATAGGAGTTGTCTGTGAA GTAAAGCAAAAATCGTCTTCTCGGGATACTATGTGTTGGTACGATTTGAA CAGCACCTAATACAGGTCGCCGGTACAGTACCTTCAACATGTCCACTTCA TACCAATAGTGGGTGTGGGAAAGATAGACGCATACTCCGTATTAACTGAT CCATTGTGACCTTGCCTAGGCAGCACTCGTTCGGAACTACCTTGAGGTTT GTTGGCCCTGTGCCGGCGGAGTCTTGACAGTGAACGCCATCGGTATGCAA TTGCGTGACCCGATAAACTCGGGACTGACCCGATGGCGTATGGTGGTTTA AATAAACAAATGGACGCCGCCGCGGAACTCGGGAATTATCTCATAAGTAA GCACCAGATTCTGACGCGGGACGGGACTGCCGAACCCGTCTCGCGTGACC AAGTTCTCAGGCGCGAACGGGGACAGGAAAATATTCATTTTTCCTGTTCA GCTGACCACGTGCAGGATTGGTAACCTTATCCGGTTGATCCATAGGCTTG CTTTGATAAAAGAGTATGTGTGACCATACATACACTAATACAAAACCGTA CGGCTTTATACTGCAGCATATTTTTGAGAAAAATCTGAACGCAGCCAAAC CTTTAGAGCAATCAAAAGGTTAGGTGGGAACATTGGCTGTAAACAAAATT CTAAATTATTATAACTGCTGTGGTACAACTGCTGTCAGTACACTACCACT ACTCCCGTTAAGAACCGTGATATGATACTCATTAGCTCTGACATTTGGGA TCATGGCCCGTTCGGACACACTCAACCTTTTCGGTAAAGACTTCGTGCCC GTAGCATGGGTGTACTACTTCAAGCCACGTAATATTCTCCCACCCCCGTC CCCCAATTCCAGATCCTCGCGAAGGACCTGGTGCGAACGCGGAATTATGT CACGAAGTTCATCGAATTTAGAAGCCATCTTCAAGGCGTTGGTCTCAAAC TCGAGACCGTGCGCTCGCATGAGGCCATGGCCAGCGCTATGAAGGACGTC ACCAAGGCCATGGTCTCTCTCAATAAACAGGTTGGTCTTAAGATGTTGAA CCATCTCCAAACAATGAAAGCTCGTGCTTTGGAGACTGTAAAAGGGGCGT TTGTTCTGTGTTCTGCAGTTAGTACAAGGTACAGACAGTATCGACTTTAT GTTATAGCTTAGCTTAGTGTGTCTGTGTGTGTTGTCATCCAATTTATTCT GGACGTCAGGTTTGTGGACGTACCAGCCGGGGTCACAGGATGTCTCTACC TTCCTCCAGCGGTGCTTGCCTTAGCTTTTCTAGCGAGAAGGATTCATCCG TTCCTTTCCCTCGTCGCCCGGGAAGTCGAATTCTATGTACTTACGAATTA GTCGTTGTCCACTTGTTGGGCGTGTGACTTCACCGAGATTCGAACTCACG TCCCAACGTCAGAAGGTTTCGAGGTTACCAACTGAACCGCCGGGGCGACG TGATTAGTAATATTAAGTAGTAATATTCGAAGAAGAATCAGAGCGACAGA ATATCTGGCATATTTCAAGCTTTACATACCTGTTAATAAGAGACAAAATA CCGAGTAATAATCTCTCGCCAGCAATTAAATAGTGACGATACAGTATCTT ATGTCCCATGTGTACAGGACATCGCGTGTGCCGTCAAGAATATATCGTAC GAGCTACGGTATATATCGGTTAAACGCAAACTGTAGGCAGGACGAGATCT TATATTGCACGTGGTATTGTGACAAGATGCGAACTCCGCAGCGTGCTGGG CAGCCCAGGGGGGCTGTTTATTTTGGCCTATTTAGACCCTTTGGATACCA TTCGCGTTTTGGAGGGAAAACCATTCGTCACAGTTACGTTTACACGGTCA GTGTGGTTGGAGAAACGGCGTTCTCTCGATCTCTAGAGAAAGCACTCGAA TCTAGCCATGTACAACGGCGGTAATGTCCGGCGGAATAGATCCTCTATTC AAGCGATTACGCTAATGCTTCGACGACAACGTCACAGGTGAACGTTCCAG CATTGCAGAAGATTATGGTGGAATTCGCCAGGGAGAACGAGCGCTCTGAA ATGACAGGGGAGCTAATAGGCGACACCCTCGACGATGCGCTCGCCAATGA CGGCGACGCAGAGGCCGAAGACAAAATCGTCAGTCAGGTGGGCACTCGCG CAGATTTTAGCTTTTACGCTGTCTACCTGGAAGTGGACAACTACGCGCCG TCTCTAGTCTCCCGGCTGTTGTGTACGCTGTGATCTCCAGCTGTCTCACG ATAGCATGATTGCTTCATTTGGAAACAACCCCAGAGTCAAAGCCAGTCTC TAGATTTTTTTCCTTTGCATGTATGGCCGGCCCTACTCCCGTCTGCATTT TGTTCCCATCATGCTGTCGTCCAGGTCCTCGATGAGATTGGCGTCACTTT CGGAGAGGGTGTCCCGGAGGCACCTACCGTCGGCATGGCGCAGGGGCCAG CTGCAGTAACAGAGTCTGCAAGACAACCCGTCGCGGCTGTTGGAGCCGAG GGCGGAGCTTCGGGTGGCGGAGGAGGAGGGGGGGGAGGAGCGTCAGGCGG CGATGGGTGTGACGCAAACATGAGCGAACTCGAAGCGCGTCTGAACAACC TTCGCCGAGGAACTTGA
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Coding sequence (CDS) from alignment at F-distichus_contig9737:6585..9551-

>mRNA_F-distichus_contig9737.19190.1 ID=mRNA_F-distichus_contig9737.19190.1|Name=mRNA_F-distichus_contig9737.19190.1|organism=Fucus distichus monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at F-distichus_contig9737:6585..9551- (Fucus distichus monoicous)
ATGAAGGCAGCCTTTTCGTCGGTGTTCGGAAAGAAGAAGCCCCTGAAGGA
AATTTTGAGAGAAAACAAACGGACGATTACGAAAGCCGTGCGGGACATCG
ACCGCGAGAAAAGTAACCTTGAGAAGCAAGAGAAGAAGCTCGTTGGGGAA
ATCAAGAAGAACGCCAAAGCGGGGCAGATGGGCGCAATGAAGGCAGCCTT
TTCGTCGGTGTTCGGAAAGAAGAAGCCCCTGAAGGAAATTTTGAGAGAAA
ACAAACGGACGATTACGAAAGCCGTGCGGGACATCGACCGCGAGAAAAGT
AACCTTGAGAAGCAAGAGAAGAAGCTCGTTGGGGAAATCAAGAAGAACGC
CAAAGCGGGGCAGATGGGCGCAATCCTCGCGAAGGACCTGGTGCGAACGC
GGAATTATGTCACGAAGTTCATCGAATTTAGAAGCCATCTTCAAGGCGTT
GGTCTCAAACTCGAGACCGTGCGCTCGCATGAGGCCATGGCCAGCGCTAT
GAAGGACGTCACCAAGGCCATGGTCTCTCTCAATAAACAGATCCTCGCGA
AGGACCTGGTGCGAACGCGGAATTATGTCACGAAGTTCATCGAATTTAGA
AGCCATCTTCAAGGCGTTGGTCTCAAACTCGAGACCGTGCGCTCGCATGA
GGCCATGGCCAGCGCTATGAAGGACGTCACCAAGGCCATGGTCTCTCTCA
ATAAACAGGTGAACGTTCCAGCATTGCAGAAGATTATGGTGGAATTCGCC
AGGGAGAACGAGCGCTCTGAAATGACAGGGGAGCTAATAGGCGACACCCT
CGACGATGCGCTCGCCAATGACGGCGACGCAGAGGCCGAAGACAAAATCG
TCAGTCAGGTGAACGTTCCAGCATTGCAGAAGATTATGGTGGAATTCGCC
AGGGAGAACGAGCGCTCTGAAATGACAGGGGAGCTAATAGGCGACACCCT
CGACGATGCGCTCGCCAATGACGGCGACGCAGAGGCCGAAGACAAAATCG
TCAGTCAGGTCCTCGATGAGATTGGCGTCACTTTCGGAGAGGGTGTCCCG
GAGGCACCTACCGTCGGCATGGCGCAGGGGCCAGCTGCAGTAACAGAGTC
TGCAAGACAACCCGTCGCGGCTGTTGGAGCCGAGGGCGGAGCTTCGGGTG
GCGGAGGAGGAGGGGGGGGAGGAGCGTCAGGCGGCGATGGGTGTGACGCA
AACATGAGCGAACTCGAAGCGCGTCTGAACAACCTTCGCCGAGGAACTTG
AGTCCTCGATGAGATTGGCGTCACTTTCGGAGAGGGTGTCCCGGAGGCAC
CTACCGTCGGCATGGCGCAGGGGCCAGCTGCAGTAACAGAGTCTGCAAGA
CAACCCGTCGCGGCTGTTGGAGCCGAGGGCGGAGCTTCGGGTGGCGGAGG
AGGAGGGGGGGGAGGAGCGTCAGGCGGCGATGGGTGTGACGCAAACATGA
GCGAACTCGAAGCGCGTCTGAACAACCTTCGCCGAGGAACTTGA
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