mRNA_F-distichus_contig9737.19190.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: D8LRU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU0_ECTSI) HSP 1 Score: 327 bits (839), Expect = 9.700e-111 Identity = 204/244 (83.61%), Postives = 214/244 (87.70%), Query Frame = 1
Query: 19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGAI--LAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRRGT 744
SVFGKKKPLKEILRENKRTIT+AVRDIDREK+NLEKQEKKLVGEIKKNAKAGQMGA+ LAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMA AMKDVTKAMVSLNKQVNVPALQKIM+EFARENERSE+TG A+DGDAEAED+IVSQVLDEIGV+F EGVPEAPT G+AQG A E+ARQPVA XXXXXXXXXXXXXXXX DA MSELEARLNNLRRGT
Sbjct: 6 SVFGKKKPLKEILRENKRTITRAVRDIDREKANLEKQEKKLVGEIKKNAKAGQMGAVKVLAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMAGAMKDVTKAMVSLNKQVNVPALQKIMLEFARENERSELTGXXXXXXXXXXXADDGDAEAEDQIVSQVLDEIGVSFDEGVPEAPTAGVAQGAAGSAEAARQPVAXXXXXXXXXXXXXXXXXXXXXXG--DAGMSELEARLNNLRRGT 247
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A835Z6L9_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6L9_9STRA) HSP 1 Score: 286 bits (731), Expect = 2.520e-94 Identity = 180/245 (73.47%), Postives = 200/245 (81.63%), Query Frame = 1
Query: 19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGAI--LAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGC--DANMSELEARLNNLRRG 741
+V GKKKPLKEI+RENKRTI +A+R++DREK+NLEKQEKK++ E+KK A A QMGA+ LAKDLVRTRNYVTKFIEFRSHLQGV LKLE VRSHEAMASAMKDVTKAMV LNKQVNVPALQKIM+EFARENER EMT EL+GD LDD + +GDA+AED IV+QVLDEIG+T GE VP AP G A AA + +Q V XXXXXXXXXXXXXXXX DA MSELEARLNNLRRG
Sbjct: 3 NVMGKKKPLKEIMRENKRTINRAIRELDREKTNLEKQEKKIISEMKKAAAANQMGAVRVLAKDLVRTRNYVTKFIEFRSHLQGVALKLEVVRSHEAMASAMKDVTKAMVQLNKQVNVPALQKIMMEFARENERQEMTSELMGDALDDVMNEEGDADAEDAIVNQVLDEIGITMGENVPVAPQGGGALDTAAEPAAQKQQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAQMSELEARLNNLRRG 247
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A8J2SQU1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQU1_9STRA) HSP 1 Score: 239 bits (610), Expect = 3.640e-76 Identity = 154/242 (63.64%), Postives = 188/242 (77.69%), Query Frame = 1
Query: 19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRR 738
+ +G+K PLKE+LR+NKR I KAVR++DRE++NLEKQE KLV +IKK AK GQMG I+AKDLVRTR Y+TKFIE RSHL V LKL+TV+S EAMA AMK VT+AMV +NK VN+P++QKIMV F ENER+EMT E++GD LDDA+A DGD++ E+KIV VLDEIG++FG+ +P+AP MA P A PVA A GXXXXXXXXXXXXXXX D +S+LEARLNNLR+
Sbjct: 3 NTWGRKVPLKEVLRKNKREINKAVRELDRERANLEKQELKLVADIKKYAKDGQMGPVKIMAKDLVRTRTYITKFIELRSHLNAVALKLQTVKSQEAMARAMKSVTEAMVRMNKTVNIPSIQKIMVNFQVENERAEMTQEVMGDMLDDAMAEDGDSDEEEKIVGAVLDEIGISFGDTIPDAPDA-MAARPQAA------PVAVADAVGXXXXXXXXXXXXXXX----DTTVSDLEARLNNLRK 233
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A7S3K1A5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1A5_9STRA) HSP 1 Score: 238 bits (607), Expect = 9.400e-76 Identity = 133/242 (54.96%), Postives = 172/242 (71.07%), Query Frame = 1
Query: 19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRR 738
+ +G++ PLKE+LR+NKR I KA+R++D+E+ NLEKQE+KL+ +I+K AK GQMG I+AKDLVRTR Y+TKFIE RSHL V LKL+TV+S EAMASAMK VT AM+ +NK VNVP +QKIM+ F RENER+E+T E++GD LDDA+ +GD E ++KIV QVLDEIG+ FG+ VPEAPT+ Q AA + Q A + G G D +S+LE RLNNLR+
Sbjct: 3 NAWGRQVPLKEVLRKNKREIQKAIRELDKERGNLEKQEQKLIADIRKFAKEGQMGPVKIMAKDLVRTRTYITKFIELRSHLNAVSLKLQTVKSQEAMASAMKSVTTAMIRMNKAVNVPTVQKIMLNFQRENERAELTQEVMGDLLDDAMEEEGDEEEQEKIVGQVLDEIGINFGDSVPEAPTI---QAQAATEPATNQKTAEPASIGAPSGGG-----------GGDHTVSDLEVRLNNLRK 230
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: F0XW09_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW09_AURAN) HSP 1 Score: 237 bits (605), Expect = 1.890e-75 Identity = 143/243 (58.85%), Postives = 180/243 (74.07%), Query Frame = 1
Query: 19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDAN-MSELEARLNNLRR 738
+ +G+K PLKE+LR+NKR I KA+R++DRE++NLEKQE+KL+ +IKK A GQMG+ I+AKDLVRTR Y+TKFIE RSHL V LKL+TV+S EAMASAMK VT+AM+ +NK VNVPA+QKIM+ F ENER+EMT E++GD LDDA+ DGD E E+KIV VLDEIG++FG+ VP APT+ Q AA +A PVA A XXXX DA+ +S+LEARLNNLR+
Sbjct: 3 NTWGRKVPLKEVLRKNKREINKAMRELDRERANLEKQEQKLIADIKKYAGQGQMGSVKIMAKDLVRTRTYITKFIELRSHLGAVSLKLQTVKSQEAMASAMKSVTQAMIKMNKTVNVPAVQKIMMNFQLENERAEMTQEMMGDMLDDAMEQDGDEEEEEKIVGAVLDEIGISFGDTVPAAPTLAPNQPQAADVPAA--PVAVADAX-------------XXXXXXADASTVSDLEARLNNLRK 230
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A448ZIR9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZIR9_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.660e-70 Identity = 129/243 (53.09%), Postives = 168/243 (69.14%), Query Frame = 1
Query: 19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEA-PTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRR 738
++ GK+KPLKE+LRENKR I +A+R++DREK+ LE++EK+L EIKK AK GQMG I+AKDLVRTR Y+TKFIE RSHLQG LKL+TV+SH AMA AMK KAM +NK V+VPA+ K+M +F REN ++E+ E++GDT+DDAL + + E E +V+QVLDEIG++FGE +P A PT P V+E+A A+ A G D +SELEARLNNL+R
Sbjct: 3 NILGKEKPLKEVLRENKRMINRAIRELDREKNGLEREEKRLTLEIKKAAKEGQMGPVNIMAKDLVRTRQYITKFIEMRSHLQGCALKLQTVKSHHAMADAMKSTAKAMHKMNKAVDVPAINKMMQDFERENAKTEIMQEIMGDTIDDALGGEENEEEEXAVVNQVLDEIGISFGEDLPSAAPTA-----PVGVSEAASPGKVAMSASGGGGDM--------------DPQLSELEARLNNLKR 226
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A1E7FZX6_9STRA (Snf7-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FZX6_9STRA) HSP 1 Score: 221 bits (564), Expect = 2.790e-69 Identity = 125/242 (51.65%), Postives = 161/242 (66.53%), Query Frame = 1
Query: 19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRR 738
++ GK KPLKE+LRENKR IT+A+R++DREK+ LE++EKKL EIKK AKAGQMG I+AKDLVRTR Y+TKFIE RSHLQG LKL+TV+SH AMA AMK AM +NK V+VPA+ K+M +F +EN ++EM E++GD +DD L + + E E+ IV+QVLDEIG++FGE +P A P A+GA+ D +SELEARLNNL+R
Sbjct: 3 NILGKDKPLKEVLRENKRMITRAIRELDREKTGLEREEKKLTMEIKKCAKAGQMGPVKIMAKDLVRTRQYITKFIEMRSHLQGCALKLQTVKSHHAMAEAMKSTASAMHKMNKAVDVPAINKMMQDFEKENMKTEMMQEIMGDAIDDVLGGEENEEEEEAIVNQVLDEIGISFGEDLPSA-----------------APTNAIGAQESAPTGKVAMSETPGGGPSDDPALSELEARLNNLKR 227
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A7S1BRV2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRV2_9STRA) HSP 1 Score: 220 bits (560), Expect = 9.580e-69 Identity = 126/244 (51.64%), Postives = 169/244 (69.26%), Query Frame = 1
Query: 19 SVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPT--VGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRR 738
+VFGK K LKE++RENKR I K++R++DREK+ LEK+EK+L+ +IKK AKAGQ + I+AKDLVRTR Y+TKFIE RSHLQGV LKL+TV+S AMA AM K+M+ NK +++P + K+M +F +ENE+SE+ E++GD +DD L +GDAE +KIVSQVLDEIG+ F E +P+AP G++ P TES QP A +GA DA ++LEARLNNL++
Sbjct: 3 AVFGKGKTLKEVIRENKREINKSIRELDREKNALEKEEKRLITDIKKQAKAGQHNSVRIMAKDLVRTRQYITKFIEMRSHLQGVALKLQTVKSQTAMAEAMTAAGKSMMKFNKAIDIPRINKMMADFMKENEKSELVQEMLGDAIDDTLEQEGDAEETEKIVSQVLDEIGIDFDENIPDAPLKPAGVSATP---TESKAQPEA-IGAN--------------------DAAFNDLEARLNNLKK 222
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: A0A7S1U260_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U260_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.330e-66 Identity = 140/237 (59.07%), Postives = 178/237 (75.11%), Query Frame = 1
Query: 28 GKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGA--ILAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNL 732
G+ KPLKE+LRE KR IT+AVR+++RE+ LEKQE +L +IKK +AGQM + I+AKDL+RT+NY+T+FIE +SHLQGV L+L+TV+SHEA+ASAM+ V+KAMV +NK+V VP L KIM +F RENER+E+TGEL+GD +DD LA + D E E+K+VSQVL E+ + + EAPT PAA + AAVG XXXXXXXXXXXXXXXX M+ELEARLNNL
Sbjct: 36 GRSKPLKEVLREQKRQITRAVREMEREQRGLEKQENQLKKDIKKACEAGQMKSVKIMAKDLIRTKNYITRFIEMKSHLQGVSLQLQTVKSHEALASAMRSVSKAMVRMNKEVKVPQLNKIMQDFVRENERAELTGELLGDLIDDTLAGENDEEEEEKVVSQVLAELNIDTAGILDEAPT----SLPAAAEAGEEKTAAAVGVGXXXXXXXXXXXXXXXXXXXXXXXMAELEARLNNL 268
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Match: W7T515_9STRA (Charged multivesicular body protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T515_9STRA) HSP 1 Score: 214 bits (545), Expect = 2.620e-66 Identity = 129/237 (54.43%), Postives = 155/237 (65.40%), Query Frame = 1
Query: 34 KKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEIKKNAKAGQMGAI--LAKDLVRTRNYVTKFIEFRSHLQGVGLKLETVRSHEAMASAMKDVTKAMVSLNKQVNVPALQKIMVEFARENERSEMTGELIGDTLDDALANDGDAEAEDKIVSQVLDEIGVTFGEGVPEAPTVGMAQGPAAVTESARQPVAAVGAEGXXXXXXXXXXXXXXXXDGCDANMSELEARLNNLRR 738
KKPLKEI+RENKR I +A+R++DRE++NLEK EKKL+ +IKK AK QMGA+ +AKDLVRTRNY TKFIE RSHLQG LKLETVRSHEAMASAM+ VT AMVS+NKQVNVPAL KIM +FARENE+SE+T +++IV VL E+G+ + VPEAP AV +A AA + G G D M++LEARLNNLRR
Sbjct: 15 KKPLKEIMRENKRMINRAIRELDRERNNLEKNEKKLIMDIKKYAKENQMGAVKTMAKDLVRTRNYQTKFIEMRSHLQGAALKLETVRSHEAMASAMRSVTSAMVSMNKQVNVPALTKIMTDFARENEKSELTXXXXXXXXXXXXXXXXXXXXQERIVGAVLTELGLDMTDAVPEAP--------GAVPNTATATAAATSSGGQREPQAL----------GADPTMTDLEARLNNLRR 233 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9737.19190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig9737.19190.1 >prot_F-distichus_contig9737.19190.1 ID=prot_F-distichus_contig9737.19190.1|Name=mRNA_F-distichus_contig9737.19190.1|organism=Fucus distichus monoicous|type=polypeptide|length=249bp MKAAFSSVFGKKKPLKEILRENKRTITKAVRDIDREKSNLEKQEKKLVGEback to top mRNA from alignment at F-distichus_contig9737:6585..9551- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig9737.19190.1 ID=mRNA_F-distichus_contig9737.19190.1|Name=mRNA_F-distichus_contig9737.19190.1|organism=Fucus distichus monoicous|type=mRNA|length=2967bp|location=Sequence derived from alignment at F-distichus_contig9737:6585..9551- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig9737:6585..9551- >mRNA_F-distichus_contig9737.19190.1 ID=mRNA_F-distichus_contig9737.19190.1|Name=mRNA_F-distichus_contig9737.19190.1|organism=Fucus distichus monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at F-distichus_contig9737:6585..9551- (Fucus distichus monoicous)back to top |