mRNA_F-distichus_contig97277.19183.1 (mRNA) Fucus distichus monoicous
|
Overview
Homology
BLAST of mRNA_F-distichus_contig97277.19183.1 vs. uniprot
Match: D8LSH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH0_ECTSI) HSP 1 Score: 113 bits (283), Expect = 1.830e-28 Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 1
Query: 1 VVQGSQYVFEEKVMAVHGAPPLVVIGMEGVWGTAIMLFILPIAAALPGRDLGTIENTMDSIVMVSQNRAIQV 216
+VQGSQY+FEEKVMAV APPLVVIGMEG+WGT IML I PIAAALPGRDLG+IENT DS MVSQ+ IQ+
Sbjct: 193 IVQGSQYIFEEKVMAVDNAPPLVVIGMEGLWGTLIMLVIFPIAAALPGRDLGSIENTQDSFYMVSQSNTIQL 264
BLAST of mRNA_F-distichus_contig97277.19183.1 vs. uniprot
Match: A0A6H5KUQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ5_9PHAE) HSP 1 Score: 110 bits (275), Expect = 5.260e-27 Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 1
Query: 10 GSQYVFEEKVMAVHGAPPLVVIGMEGVWGTAIMLFILPIAAALPGRDLGTIENTMDSIVMVSQNRAIQV 216
GSQY+FEEKVMAV APPLVVIGMEG+WGT IML I PIAAALPGRDLG+IENT DS MVSQ+ AIQ+
Sbjct: 194 GSQYIFEEKVMAVDNAPPLVVIGMEGLWGTLIMLVIFPIAAALPGRDLGSIENTQDSFYMVSQSNAIQL 262
BLAST of mRNA_F-distichus_contig97277.19183.1 vs. uniprot
Match: A0A836CAF8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF8_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.690e-20 Identity = 48/71 (67.61%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 1 VVQGSQYVFEEKVMAVHGAPPLVVIGMEGVWGTAIMLFILPIAAALPGRDLGTIENTMDSIVMVSQNRAIQ 213
VVQGSQY+FEEKVMAV APPLVVIGMEG+WG+ IML + PI PG D G+IENT DSI MV + IQ
Sbjct: 193 VVQGSQYIFEEKVMAVDDAPPLVVIGMEGLWGSVIMLALFPILYYTPGADKGSIENTWDSIDMVRNSAPIQ 263
BLAST of mRNA_F-distichus_contig97277.19183.1 vs. uniprot
Match: A0A7S3M124_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M124_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.930e-15 Identity = 37/68 (54.41%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 1 VVQGSQYVFEEKVMAVHGAPPLVVIGMEGVWGTAIMLFIL-PIAAALPGRDLGTIENTMDSIVMVSQN 201
+ QG QYVFEEKVM+V APPLVVIG EG+WG A+ LF++ P+A PG+D G+ E+ D++ M+ N
Sbjct: 213 IAQGVQYVFEEKVMSVDNAPPLVVIGCEGLWGAALSLFVVYPLAYLAPGQDNGSFEDPFDALTMIGNN 280
BLAST of mRNA_F-distichus_contig97277.19183.1 vs. uniprot
Match: A0A1V9Y6X2_9STRA (Drug/Metabolite Transporter (DMT) Superfamily n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6X2_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 8.190e-15 Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 1 VVQGSQYVFEEKVMAVHGAPPLVVIGMEGVWGTAIMLFIL-PIAAALPGRDLGTIENTMDSIVMVSQNRAIQ 213
++ SQYV EE VM PP++VIG+EGVWGT IMLFI+ PIA LPG D G E+ +DSIVM++ + IQ
Sbjct: 160 LITSSQYVLEETVMRKKDTPPMMVIGLEGVWGTLIMLFIVFPIAYMLPGADNGHAEDVIDSIVMITNSSTIQ 231
BLAST of mRNA_F-distichus_contig97277.19183.1 vs. uniprot
Match: A0A7S3UY76_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UY76_HETAK) HSP 1 Score: 76.6 bits (187), Expect = 2.020e-14 Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 1 VVQGSQYVFEEKVMAVHGAPPLVVIGMEGVWGTAIMLFIL-PIAAALPGRDLGTIENTMDSIVMVSQNRAIQ 213
VV G QYVFEEKVM PPLVVIGMEGVWGT + +F L P+A +PG D G++EN D+ VM + AIQ
Sbjct: 194 VVCGMQYVFEEKVMTNDKCPPLVVIGMEGVWGTLMTVFFLFPVAYYIPGTDDGSLENPYDTWVMWQNSPAIQ 265
BLAST of mRNA_F-distichus_contig97277.19183.1 vs. uniprot
Match: A0A7J6U3C0_PEROL (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6U3C0_PEROL) HSP 1 Score: 72.4 bits (176), Expect = 8.260e-14 Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 1 VVQGSQYVFEEKVMAVHGAPPLVVIGMEGVWGTAIMLFI-LPIAAALPGRDLGTIENTMDSIVMVSQNRAIQ 213
++Q Q V EEK M PP +V+GMEG+WGT IM+FI LPI +PG D G++ENT+DS+V+ + +Q
Sbjct: 9 IIQSLQLVTEEKFMKNINIPPFLVVGMEGIWGTLIMIFITLPIIYYIPGNDSGSLENTLDSVVLYENSPEMQ 80
BLAST of mRNA_F-distichus_contig97277.19183.1 vs. uniprot
Match: K8YYA0_NANGC (Drug metabolite transporter superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YYA0_NANGC) HSP 1 Score: 73.2 bits (178), Expect = 3.110e-13 Identity = 37/73 (50.68%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 1 VVQGSQYVFEEKVMAVHGAPPLVVIGMEGVWGTAIMLFIL-PIAAALPGRDLG-TIENTMDSIVMVSQNRAIQ 213
+VQG+QYVFEEKVM V PP+V++G+EG WG +ML ++ P A LPG D G ++EN DS+ MV + +Q
Sbjct: 167 LVQGTQYVFEEKVMTVESLPPMVLVGLEGFWGMILMLLVVFPSAYYLPGTDEGGSMENVFDSLAMVRNSAPLQ 239
BLAST of mRNA_F-distichus_contig97277.19183.1 vs. uniprot
Match: C5KA08_PERM5 (Uncharacterized protein n=5 Tax=Perkinsus TaxID=28000 RepID=C5KA08_PERM5) HSP 1 Score: 73.2 bits (178), Expect = 3.210e-13 Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 1 VVQGSQYVFEEKVMAVHGAPPLVVIGMEGVWGTAIMLFI-LPIAAALPGRDLGTIENTMDSIVMVSQNRAIQ 213
++Q Q V EEK M PP +V+GMEG+WGT IM+FI LPI +PG D G++ENT+DS+V+ + +Q
Sbjct: 208 IIQSLQLVTEEKFMKSINIPPFLVVGMEGIWGTLIMIFIALPIIYYIPGNDSGSLENTLDSVVLYENSSEMQ 279
BLAST of mRNA_F-distichus_contig97277.19183.1 vs. uniprot
Match: W7UAT2_9STRA (Drug metabolite transporter superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UAT2_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 3.560e-13 Identity = 37/73 (50.68%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 1 VVQGSQYVFEEKVMAVHGAPPLVVIGMEGVWGTAIMLFIL-PIAAALPGRDLG-TIENTMDSIVMVSQNRAIQ 213
+VQG+QYVFEEKVM V PP+V++G+EG WG +ML ++ P A LPG D G ++EN DS+ MV + +Q
Sbjct: 142 LVQGTQYVFEEKVMTVESLPPMVLVGLEGFWGMILMLLVVFPSAYYLPGTDEGGSMENVFDSLAMVRNSAPLQ 214 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig97277.19183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig97277.19183.1 >prot_F-distichus_contig97277.19183.1 ID=prot_F-distichus_contig97277.19183.1|Name=mRNA_F-distichus_contig97277.19183.1|organism=Fucus distichus monoicous|type=polypeptide|length=89bp VVQGSQYVFEEKVMAVHGAPPLVVIGMEGVWGTAIMLFILPIAAALPGRDback to top mRNA from alignment at F-distichus_contig97277:1599..1865- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig97277.19183.1 ID=mRNA_F-distichus_contig97277.19183.1|Name=mRNA_F-distichus_contig97277.19183.1|organism=Fucus distichus monoicous|type=mRNA|length=267bp|location=Sequence derived from alignment at F-distichus_contig97277:1599..1865- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig97277:1599..1865- >mRNA_F-distichus_contig97277.19183.1 ID=mRNA_F-distichus_contig97277.19183.1|Name=mRNA_F-distichus_contig97277.19183.1|organism=Fucus distichus monoicous|type=CDS|length=534bp|location=Sequence derived from alignment at F-distichus_contig97277:1599..1865- (Fucus distichus monoicous)back to top |