mRNA_F-distichus_contig9717.19172.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig9717.19172.1
Unique NamemRNA_F-distichus_contig9717.19172.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
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BLAST of mRNA_F-distichus_contig9717.19172.1 vs. uniprot
Match: A0A6H5K260_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K260_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 9.420e-101
Identity = 225/491 (45.82%), Postives = 257/491 (52.34%), Query Frame = 1 
Query:  223 IALLFDEDYDSHSFYYFKRIEEWFAEADAVVFVGTSFAVTLTSLAIREAKRRCVPVFDFNVSVCLKASPSFNAKTVLGPAEATLPALARLAGVPIFTGDQDYSSTSVSSTSPPISPTVEQQLQEKKQREEVRGNSEDDESPLG-------RRPRDGSSNDDGDAGDA-------------------------------------------------------------KVARYFPGGXXXXXXXXXXXXXXXXXXXXXXXXXXDKAGVWGGGAKYLLEPVLEPPLRKDQVRVDLSEAYSRKPHPDPE----------QQLVKSPLLFNGTKFRLAGYSTEGDH-SGASAPTAAPEVDSAENMDSDGGGDSSGKTSPRARA---------------RSPCYT-PPTKMLRLQLGLTDYRTFRGTNWSPAASRLAADSARDFPWLEGAYLSQKLGVTAIVETVDGFLLSLCRSSGVAEGQGMLGAPGGHPEPK 1410
            ++LLFDEDYDSHSFY F++ E+WF EADAVVFVGTSFAVTLTSLAIREAKRR +PVFDFNVSV LK+SP+ +AKTVLG AEATLPALA  AGV I T                   +                 SE +   +G        R  DG    DG    A                                                             K A+                               D    WGGGA+YLLEP LE PLR+DQVRVD++EAYSRKPHPDPE          +QL K+PLLFNG+KFRLAG+STEG+  S A+A T A     A                                    RSP  + PPT+ LRL+LGLTDYRTFRGTNWSP+A+ LAADSARD PWLE AYLSQKLGV A+VET DGFLLSLCRS+GVAEGQGM+GAPGGHPEP+
Sbjct:    1 MSLLFDEDYDSHSFYEFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRGIPVFDFNVSVSLKSSPALDAKTVLGRAEATLPALASAAGVSIATKPTAXXXXXXXXXXXXXXESXXXXXXXXXXXXXXXXISERECPEVGPVAAPGPARGEDGGGVVDGRRSPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAKRAKCVLHSASGAVIADADAVGEPVTPMARPSAAGDGDMAWGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPEVEANIEVLWQEQLAKNPLLFNGSKFRLAGFSTEGNRKSSATAITTATATADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPMSSSPPTRKLRLRLGLTDYRTFRGTNWSPSAATLAADSARDHPWLEAAYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPE 491
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BLAST of mRNA_F-distichus_contig9717.19172.1 vs. uniprot
Match: D8LHN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN6_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 1.680e-77
Identity = 136/217 (62.67%), Postives = 155/217 (71.43%), Query Frame = 1 
Query:  823 WGGGAKYLLEPVLEPPLRKDQVRVDLSEAYSRKPHPDPEQQLVKSPLLFNGTKFRLAGYSTEGDHSGASAPTAAPEVDSAENMDSDGGGDSSGKTSPRAR---------------------ARSPCYTPPTKMLRLQLGLTDYRTFRGTNWSPAASRLAADSARDFPWLEGAYLSQKLGVTAIVETVDGFLLSLCRSSGVAEGQGMLGAPGGHPEPK 1410
            WGGGA+YLLEP LE PLR+DQVRVD++EAYSRKPHPDPE  L K+PLLFNG+KF LAG+STEGD   ++  TA              GG  S  T                          +RSP  +PPT+ LRL+LGLTDYRTFRGTNWSP+A+RLAADSARD PWLE AYLSQKLGV A+VET DGFLLSLCRS+GVAEGQGM+GAPGGHPEP+
Sbjct:   14 WGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPEALLAKNPLLFNGSKFWLAGFSTEGDRKPSATATATANP---------AGGAVSDTTXXXXXXXXXXXXXXXXXXXXXXXXXXSRSPTSSPPTRKLRLRLGLTDYRTFRGTNWSPSAARLAADSARDHPWLEAAYLSQKLGVGAVVETKDGFLLSLCRSNGVAEGQGMMGAPGGHPEPE 221
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BLAST of mRNA_F-distichus_contig9717.19172.1 vs. uniprot
Match: D8LHN5_ECTSI (Deacetylase sirtuin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN5_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 4.710e-35
Identity = 65/98 (66.33%), Postives = 78/98 (79.59%), Query Frame = 1 
Query:   64 CPYSFEKDIKPSDFPESVRTVL---EDETYAAAASGLRRHLVDVPRCPHCGGPSPPIALLFDEDYDSHSFYYFKRIEEWFAEADAVVFVGTSFAVTLT 348
            CPYSF+K+I+P DF ESVR  L   +D+ + AAA GL R L ++PRCP CG  S P++LLFDEDYDSHSFY F++ E+WF EADAVVFVGTSFAVTLT
Sbjct:  130 CPYSFDKEIRPEDFTESVRATLTLDDDDAHTAAARGLGRSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYDFEKAEDWFKEADAVVFVGTSFAVTLT 227
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BLAST of mRNA_F-distichus_contig9717.19172.1 vs. uniprot
Match: A0A7S2CWY6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CWY6_9STRA)

HSP 1 Score: 125 bits (313), Expect = 6.410e-29
Identity = 65/143 (45.45%), Postives = 84/143 (58.74%), Query Frame = 1 
Query:   64 CPYSFEKDIKPSDFPESVRTVLEDETYAAAASGLRRHLVDVPRCPHCGGPSPPIALLFDEDYDSHSFYYFKRIEEWFAEADAVVFVGTSFAVTLTSLAIREAKRRCVPVFDFNVSVCLKASPSFNAKTVLGPAEATLPALARL 492
            CPYS    I P  F  +++  L           LR+    VP CP C  P  P ALLFDEDY  H FY F R++EW  EA+ VVFVGTSFAVTLT+LA+ EA+ R +P+F+FN+    ++ P+ +   + GPAE  LP L  L
Sbjct:   93 CPYSEHDSIGPGSFSTALQKQLGHNVGKNKLPKLRQ----VPLCPSCSNPCMPQALLFDEDYTDHEFYQFDRLQEWLEEAEVVVFVGTSFAVTLTTLAMDEARDRHLPIFNFNIDGEDRSKPTLDWSNIEGPAEVRLPELVAL 231
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BLAST of mRNA_F-distichus_contig9717.19172.1 vs. uniprot
Match: A0A7S2NYC1_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NYC1_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.980e-27
Identity = 72/168 (42.86%), Postives = 97/168 (57.74%), Query Frame = 1 
Query:   40 DGDGSEGECPYSFEKDIKPSDF-PESVRTVLE----------------DETYAAAASGLRRHLVDVPRCPHCGGPSPPIALLFDEDYDSHSFYYFKRIEEWFAEADAVVFVGTSFAVTLTSLAIREAKRRCVPVFDFNVSVCLKASPSFNAKTVLGPAEATLPALARL 492
            DG+ +   C Y   K+I+PS+  PE VR VL+                 +   A  S  R  L + P CP C  P  P ALLFDE Y SHS Y F+  EEW A A A+VFVGTSFAVT+T +A+  A+++ VPV++FN+S  L+ +   +A+ VLGPA+ TL +L  L
Sbjct:  146 DGNKNNRPCVYEAMKNIQPSELNPEDVRRVLDPVVAHVGHHPDAPPASSDDADADDSNSRISLKEPPLCPGCSRPCMPQALLFDEGYHSHSHYKFETAEEWIANASALVFVGTSFAVTITDVALEFARKKGVPVYNFNLSDRLEPTSRLHAENVLGPADDTLTSLLAL 313
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BLAST of mRNA_F-distichus_contig9717.19172.1 vs. uniprot
Match: A0A4D9CSB5_9STRA (Deacetylase sirtuin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSB5_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.490e-26
Identity = 129/435 (29.66%), Postives = 179/435 (41.15%), Query Frame = 1 
Query:  175 LVDVPRCPHCG-GPSPPIALLFDEDYDSHSFYYFKRIEEWFAEADAVVFVGTSFAVTLTSLAIREAKR-RCVPVFDFNV--SVCLKASPSFNAKTVLGPAEATLPALARLAGVPIFTGDQDYSSTSVSSTSPPISPTVEQQLQEKKQREEVRGNSEDDESPLGRRPRDGSSNDDGDAGDAKVARYFPGGXXXXXXXXXXXXXXXXXXXXXXXXXXDKAGVWGGGAKYLLE----PVLEPPLRKDQVRVDLSEAYSRKPHPDP---------------EQQLVKSPLLFNGTKFRLAGYSTEGDHSGASAPTAAPEVDSAENMDSDGGGDSSGKTSPRARARSPCYTPPTKMLRLQLGLTDYRTFRGTNWSPAASRLAADSARDFPWLEGAYLSQKLGVTAIVETVDGFLLSLCRSS-GVAEGQGMLGAPGGHPEP 1407
            L  VPRC  CG G   P+AL+FDE YDSH+FY   +    F EADA+VFVGTSF V +++LAI    R R +P+F+FN+   +       ++   ++GPAE T+  L       +   ++D                   +++ +K RE + G        +G+              D +                                  D+ G    G  Y  E    P+   P  ++ V +D +  Y R  HPD                E++      LFN  KFRLAG                        +   GG            AR      P K+L L+L LTDY+T RGTN +  A  L AD        +  YLSQKLGV+AI+ T DG L+ + RS+ GVA+ QG +  PGGHPEP
Sbjct:  179 LTHVPRCTECGTGYMMPLALMFDEMYDSHAFYQSDKALTAFEEADALVFVGTSFQVNISNLAIEAGPRKRGIPIFNFNIRDGLAKGGGRRYDVFNIIGPAEETMQKLLEQVEACL---EKDRLG----------------RVETEKHREVLGGTL-----CVGK-------------ADCRTTHEVGKTVSNHVVCNKCPSQPSAKVPATPFTSSDQPGQAKSGPSYAFEIFPQPIFPFPFSEEDVEIDFNPCYGRLSHPDSRLEANIDSTWDRLSEEREAQGCSALFNAVKFRLAGC-----------------------LLVKGG-----------EAR------PMKLL-LELWLTDYKTARGTNHASIAPLLQADGLATHKDAQ-VYLSQKLGVSAILCTQDGDLVFIERSTKGVADFQGYIDTPGGHPEP 534
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BLAST of mRNA_F-distichus_contig9717.19172.1 vs. uniprot
Match: A0A7S1GMY1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMY1_CYCTE)

HSP 1 Score: 110 bits (275), Expect = 4.010e-25
Identity = 54/121 (44.63%), Postives = 75/121 (61.98%), Query Frame = 1 
Query:  127 LEDETYAAAASGLRRHLVDVPRCPHCGGPSPPIALLFDEDYDSHSFYYFKRIEEWFAEADAVVFVGTSFAVTLTSLAIREAKRRCVPVFDFNVSVCLKASPSFNAKTVLGPAEATLPALAR 489
            +E      A     R L   P CPHC  P PP ALLFDE Y SH FY F+R+EE  ++   +VFVGTSFAV++T +A+  A+   +PV++FN+   L+A+   N + V+GP+  TLP LA+
Sbjct:   19 VEPPEVRQALQAKCRKLEKPPLCPHCLRPCPPQALLFDEGYHSHDFYQFERMEECLSKCAVMVFVGTSFAVSITDVALEHAREHEIPVYNFNICDLLEATARLNVENVVGPSNQTLPRLAK 139
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BLAST of mRNA_F-distichus_contig9717.19172.1 vs. uniprot
Match: A0A7S4AMH6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AMH6_9STRA)

HSP 1 Score: 114 bits (286), Expect = 3.030e-24
Identity = 63/146 (43.15%), Postives = 82/146 (56.16%), Query Frame = 1 
Query:   64 CPYSFEKDIKPSDF-PESVRTVLEDETYAAAASGLRRH---LVDVPRCPHCGGPSPPIALLFDEDYDSHSFYYFKRIEEWFAEADAVVFVGTSFAVTLTSLAIREAKRRCVPVFDFNVSVCLKASPSFNAKTVLGPAEATLPALAR 489
            CPY  EK +      P SVR              LRR    L + P+CPHC     P ALLFDE Y SH FY F+++EEW AEA+ +VFVGTSFAV LT + +  A+ + +PV++ N    L  +   +A  + GPAE TLP LA+
Sbjct:  249 CPYQTEKSLAVDQIEPSSVR------------ENLRRGKGPLSETPKCPHCKKTLAPQALLFDEGYHSHDFYEFQKMEEWLAEAEVIVFVGTSFAVRLTEVTLEHARAKDIPVYNINTHDMLSPTNILDAYNIRGPAEETLPLLAQ 382
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BLAST of mRNA_F-distichus_contig9717.19172.1 vs. uniprot
Match: A0A7S1UY41_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UY41_9STRA)

HSP 1 Score: 112 bits (280), Expect = 4.710e-24
Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 1 
Query:  136 ETYAAAASGLRRHLVDVPRCPHCGGPSPPIALLFDEDYDSHSFYYFKRIEEWFAEADAVVFVGTSFAVTLTSLAIREAKRRCVPVFDFNVSVCLKASPSFNAKTVLGPAEATLPALAR 489
            E + A    LR+ +   P CP C  P+ P+ALLFDE Y SHS Y F+ +EEW ++AD VVFVGTSFAV LT++A+   K + + V++FN    L  SP+ + + VLGPAE TLPAL +
Sbjct:  194 EEFNAMGQPLRQ-VTAPPLCPICRTPALPLALLFDEGYHSHSHYAFRDMEEWLSKADVVVFVGTSFAVWLTNVALEHCKAQNLRVYNFNTQDTLPPSPNLDVENVLGPAEETLPALVK 310
[Close]
BLAST of mRNA_F-distichus_contig9717.19172.1 vs. uniprot
Match: A0A7S0CDM1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDM1_9STRA)

HSP 1 Score: 106 bits (265), Expect = 9.790e-24
Identity = 50/126 (39.68%), Postives = 79/126 (62.70%), Query Frame = 1 
Query:  106 PESVRTVLEDETYAAAASGLRRHLVDVPRCPHCGGPSPPIALLFDEDYDSHSFYYFKRIEEWFAEADAVVFVGTSFAVTLTSLAIREAKRRCVPVFDFNVSVCLKASPSFNAKTVLGPAEATLPAL 483
            P+S++ +  ++ Y    + +++ L   P CP+C  P PP +LLFDE Y SH  Y F+++E W   AD +VFVGTSFAVT+T +A+  A+   +PVF+ N++  L +S   N + ++G +E  LP L
Sbjct:    7 PQSIKPLNSNDQYH---TNIQKPLKAPPLCPNCKRPCPPQSLLFDEGYHSHEHYQFEKMESWIENADVMVFVGTSFAVTITDVALEYARNENIPVFNLNLNERLNSSSRLNVENLIGKSEQILPKL 129
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9717.19172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K260_9PHAE9.420e-10145.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHN6_ECTSI1.680e-7762.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHN5_ECTSI4.710e-3566.33Deacetylase sirtuin-type domain-containing protein... [more]
A0A7S2CWY6_9STRA6.410e-2945.45Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2NYC1_9STRA3.980e-2742.86Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A4D9CSB5_9STRA1.490e-2629.66Deacetylase sirtuin-type domain-containing protein... [more]
A0A7S1GMY1_CYCTE4.010e-2544.63Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4AMH6_9STRA3.030e-2443.15Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S1UY41_9STRA4.710e-2449.15Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S0CDM1_9STRA9.790e-2439.68Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9717contigF-distichus_contig9717:391..3504 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.2
Seed ortholog evalue9.8e-67
Seed eggNOG ortholog2880.D8LHN6
Preferred nameNUDT22
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0008150,GO:0008768,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0031974,GO:0031981,GO:0042221,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0050896,GO:0051716,GO:0052751,GO:0060359,GO:0070013,GO:0070887,GO:0071242,GO:1901698,GO:1901699
EggNOG free text desc.GDP-mannose hydrolase activity
EggNOG OGs28JDX@1,2QRSW@2759
Ec32 ortholog descriptionSirtuin histone deacetylase
Ec32 orthologEc-26_003780.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1440
Cds size1440
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9717.19172.1prot_F-distichus_contig9717.19172.1Fucus distichus monoicouspolypeptideF-distichus_contig9717 391..3504 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931151.2415166-CDS-F-distichus_contig9717:390..5811622931151.2415166-CDS-F-distichus_contig9717:390..581Fucus distichus monoicousCDSF-distichus_contig9717 391..581 +
1690886180.3052602-CDS-F-distichus_contig9717:390..5811690886180.3052602-CDS-F-distichus_contig9717:390..581Fucus distichus monoicousCDSF-distichus_contig9717 391..581 +
1622931151.2760038-CDS-F-distichus_contig9717:1371..15291622931151.2760038-CDS-F-distichus_contig9717:1371..1529Fucus distichus monoicousCDSF-distichus_contig9717 1372..1529 +
1690886180.3249738-CDS-F-distichus_contig9717:1371..15291690886180.3249738-CDS-F-distichus_contig9717:1371..1529Fucus distichus monoicousCDSF-distichus_contig9717 1372..1529 +
1622931151.2950253-CDS-F-distichus_contig9717:1820..24101622931151.2950253-CDS-F-distichus_contig9717:1820..2410Fucus distichus monoicousCDSF-distichus_contig9717 1821..2410 +
1690886180.337752-CDS-F-distichus_contig9717:1820..24101690886180.337752-CDS-F-distichus_contig9717:1820..2410Fucus distichus monoicousCDSF-distichus_contig9717 1821..2410 +
1622931151.3407004-CDS-F-distichus_contig9717:2832..30941622931151.3407004-CDS-F-distichus_contig9717:2832..3094Fucus distichus monoicousCDSF-distichus_contig9717 2833..3094 +
1690886180.3492923-CDS-F-distichus_contig9717:2832..30941690886180.3492923-CDS-F-distichus_contig9717:2832..3094Fucus distichus monoicousCDSF-distichus_contig9717 2833..3094 +
1622931151.3573384-CDS-F-distichus_contig9717:3265..35041622931151.3573384-CDS-F-distichus_contig9717:3265..3504Fucus distichus monoicousCDSF-distichus_contig9717 3266..3504 +
1690886180.3626006-CDS-F-distichus_contig9717:3265..35041690886180.3626006-CDS-F-distichus_contig9717:3265..3504Fucus distichus monoicousCDSF-distichus_contig9717 3266..3504 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig9717.19172.1

>prot_F-distichus_contig9717.19172.1 ID=prot_F-distichus_contig9717.19172.1|Name=mRNA_F-distichus_contig9717.19172.1|organism=Fucus distichus monoicous|type=polypeptide|length=480bp
VAEEATVKDEEEEDGDGSEGECPYSFEKDIKPSDFPESVRTVLEDETYAA
AASGLRRHLVDVPRCPHCGGPSPPIALLFDEDYDSHSFYYFKRIEEWFAE
ADAVVFVGTSFAVTLTSLAIREAKRRCVPVFDFNVSVCLKASPSFNAKTV
LGPAEATLPALARLAGVPIFTGDQDYSSTSVSSTSPPISPTVEQQLQEKK
QREEVRGNSEDDESPLGRRPRDGSSNDDGDAGDAKVARYFPGGGATHGGD
AAGGPAMAAAAAAAAAAVDDKAGVWGGGAKYLLEPVLEPPLRKDQVRVDL
SEAYSRKPHPDPEQQLVKSPLLFNGTKFRLAGYSTEGDHSGASAPTAAPE
VDSAENMDSDGGGDSSGKTSPRARARSPCYTPPTKMLRLQLGLTDYRTFR
GTNWSPAASRLAADSARDFPWLEGAYLSQKLGVTAIVETVDGFLLSLCRS
SGVAEGQGMLGAPGGHPEPKVGGGKNYQY*
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mRNA from alignment at F-distichus_contig9717:391..3504+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig9717.19172.1 ID=mRNA_F-distichus_contig9717.19172.1|Name=mRNA_F-distichus_contig9717.19172.1|organism=Fucus distichus monoicous|type=mRNA|length=3114bp|location=Sequence derived from alignment at F-distichus_contig9717:391..3504+ (Fucus distichus monoicous)
GTCGCGGAGGAAGCGACGGTGAAGGATGAGGAAGAGGAGGACGGTGACGG
GTCAGAAGGCGAGTGTCCGTACTCCTTCGAGAAGGACATCAAGCCGTCGG
ATTTTCCAGAGAGCGTGCGCACGGTGCTCGAGGACGAGACCTACGCTGCA
GCGGCCAGCGGCTTGCGGCGACATCTGGTCGACGTTCCGAGGTGTGTGCG
GGTGCCTTGCGGCATGCGGGCTTATACGCACTGTGTCGCGATAGAGCGTT
AACAAACGCACCCCCCCCCCGATCCACAGTTTACTCCGTATTCTTCACTT
TTGCCAGGTTTTGTCTTTAATCATATATTTTATATGTCGCTCGTAATAGG
AAGTTTGACTGCCTCACTCGCCATTCCGCGCAAGAATACGACGAGACGAG
CGCGCTGCAAGCAGTGTCTTGCTCAGCTCGCGTTGGACAGCGATGTATAC
GTCGTTGAGATTTTAACGGGCGGCACTGTTTTTCCTACAAATCTGGTCGT
ACGACAGCACGTACACGCCATAACTGATGTTTCCTACTTTATTTATTTAT
AAAACAGTAAGGACAGGGACGCTGAGAAAGTAACCCTTGAAAGCAAAGCT
CCAACGGGAAAGTATAACACATTCTACTTCCGTTATGTTTTCCAACTGTA
GGAGTAGCTACATACAATATTACTAGTATACTTATCTCGAACGTGCGGGG
TAGAACAACGATATGACAAAATAAAAGCTTTGCACATTTTCTTGAGCGTT
TCCCTCCGATCCCAGCACCTTTGAAAGCTATCGATAGAAACGCGAATCTT
CGCAAACCTACCTGCTCTCCAGCGCAGTTTGATGTCTTGCTCTCGGGGAT
TTCATTCGACTGGACAGGTGCGTGCTCTTGTTTATTCGTGCACCGTATCG
TCGTCCGTGACCGGGATGCCGTACGCACTTCTTTTTTTTTTGGTGGGGGG
GGGGTGGAATTGCAATGCCCGTTGTTCGCAGGTGCCCCCATTGCGGGGGC
CCGTCCCCGCCGATAGCCCTCCTGTTTGACGAGGACTATGACAGCCACAG
CTTCTACTACTTCAAGCGCATCGAAGAATGGTTCGCGGAGGCCGACGCAG
TTGTTTTTGTCGGCACATCGTTCGCCGTCACGCTAACTTGTTGAGTGCTA
TGCATTCTGTCAAGATAGAACACGTTACCTCCACCTCATGCCCCCACCCC
ACGTCCCCTTCGCAAACCAACTTATTTCGTAAATCGCGAGCAACGAAATG
AGATACACGATCGTATTTTTAAAAGATTTCAGTTTTCATTTTGTTTTTTA
GTTTGTGTGTACGTTGTAAGCACAGAACGCGCACGCGTAAGACGCCGCTT
CGCCTCCACCTAACCGCACCCGTGATTTTGCGTGTGTGTTTATGTGTGTG
TGTGTGTGTGTGTGTGTTTGTTATCCACAGCGTTGGCCATACGCGAGGCG
AAGCGTCGCTGCGTCCCAGTGTTTGACTTCAACGTCTCTGTGTGCCTCAA
GGCATCCCCGTCTTTCAACGCCAAGACTGTTCTCGGCCCCGCGGAGGCCA
CGCTCCCGGCCCTCGCCAGGCTGGCGGGGGTCCCTATTTTTACGGGCGAC
CAAGACTACAGCAGCACTAGCGTCAGCAGCACCAGCCCGCCGATCTCGCC
CACGGTCGAGCAGCAGTTGCAAGAGAAAAAGCAGCGGGAGGAAGTGAGGG
GAAACAGCGAAGACGATGAGTCTCCGCTAGGCCGACGACCGCGCGATGGG
AGTTCCAACGACGACGGCGACGCGGGTGACGCAAAGGTTGCGAGGTATTT
TCCCGGCGGTGGCGCCACACACGGCGGGGATGCCGCTGGTGGGCCAGCGA
TGGCCGCGGCGGCAGCGGCAGCGGCTGCCGCTGTGGATGATAAGGCGGGA
GTCTGGGGTGGGGGCGCGAAGTACTTGCTGGAGCCGGTTTTGGAGCCGCC
GCTGCGGAAGGATCAAGTGCGCGTAGATCTATCCGAGGCGTACTCGCGGA
AACCGCACCCCGATCCAGAGGTGTGTGGGTATAGCTAGATCACGCTGTCT
CACTCGTTTGATCCTCGAAGATTTTTTGTTGGTTGGTACTTGCCGAACGT
AGTCGGTTTATAAACACCATCCGTCCACGCGCCGTACCCGCTATCCCACT
GTCCTCAAGAGAGGCGAGGGGGGGGCGTCTACGAACGAACGCCTCAAATG
ATTTGTTTACCGTCGTGCGCTCTGGTCGCTGCGGCCAATCTCTGTAGAAG
TGTGCTCGTGTCATCATACGTGAGTCGAGGGGGGGGAATGTTTCGGAATC
CTTCCCGACCGTGTCCCTTGCAGTAACGACCACAAGGATCATATATCCGT
GGACGCCGTTATTATTTGCTTAAAATATGTATAGCCGAATTGTTGTTGGT
ATATGCGACCAGGTGGAGGCTATGGTGGAGGAGCTCTGGCAGCAGCAGCT
CGTCAAGAGCCCCCTCCTGTTCAACGGTACGAAGTTTCGCCTGGCGGGGT
ACTCCACCGAGGGCGACCACTCCGGTGCCTCAGCTCCCACCGCTGCCCCG
GAAGTCGATTCCGCGGAAAATATGGACTCAGACGGAGGAGGAGACTCTTC
AGGAAAAACCTCGCCGAGGGCTCGGGCGCGGTCCCCGTGTTATACTCCCC
CGACCAAGATGCTCAGGTTGCAGCTCGGCCTGACCGATTATCGCACGTTT
CGAGGTGTGTCCGCAACCTGTGTAGAGATGCGCAATACCATTGACGGATA
CGGGTACCGGAAATTACGGGGAGCATGGGAAGGCCGGGGATAGAGACCAG
AGCTTTCCTCGGCGCCTCCCTGTTCACTTGCGTTACCCCTTACCAAGAAT
ATCAAACACCTTCATTCTGAACCAGGAACTAACTGGTCCCCGGCAGCGTC
CAGACTTGCGGCGGACAGTGCGCGCGATTTCCCATGGTTAGAGGGGGCTT
ACCTCTCTCAGAAGCTTGGCGTGACGGCAATCGTGGAAACTGTGGACGGC
TTTCTGCTTTCCCTCTGTCGAAGCAGTGGAGTGGCGGAAGGACAGGGGAT
GCTGGGTGCGCCAGGTGGACACCCCGAGCCCAAGGTTGGTGGGGGAAAAA
ACTACCAGTACTAA
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Coding sequence (CDS) from alignment at F-distichus_contig9717:391..3504+

>mRNA_F-distichus_contig9717.19172.1 ID=mRNA_F-distichus_contig9717.19172.1|Name=mRNA_F-distichus_contig9717.19172.1|organism=Fucus distichus monoicous|type=CDS|length=2880bp|location=Sequence derived from alignment at F-distichus_contig9717:391..3504+ (Fucus distichus monoicous)
GTCGCGGAGGAAGCGACGGTGAAGGATGAGGAAGAGGAGGACGGTGACGG
GTCAGAAGGCGAGTGTCCGTACTCCTTCGAGAAGGACATCAAGCCGTCGG
ATTTTCCAGAGAGCGTGCGCACGGTGCTCGAGGACGAGACCTACGCTGCA
GCGGCCAGCGGCTTGCGGCGACATCTGGTCGACGTTCCGAGGTCGCGGAG
GAAGCGACGGTGAAGGATGAGGAAGAGGAGGACGGTGACGGGTCAGAAGG
CGAGTGTCCGTACTCCTTCGAGAAGGACATCAAGCCGTCGGATTTTCCAG
AGAGCGTGCGCACGGTGCTCGAGGACGAGACCTACGCTGCAGCGGCCAGC
GGCTTGCGGCGACATCTGGTCGACGTTCCGAGGTGCCCCCATTGCGGGGG
CCCGTCCCCGCCGATAGCCCTCCTGTTTGACGAGGACTATGACAGCCACA
GCTTCTACTACTTCAAGCGCATCGAAGAATGGTTCGCGGAGGCCGACGCA
GTTGTTTTTGTCGGCACATCGTTCGCCGTCACGCTAACTTGTGCCCCCAT
TGCGGGGGCCCGTCCCCGCCGATAGCCCTCCTGTTTGACGAGGACTATGA
CAGCCACAGCTTCTACTACTTCAAGCGCATCGAAGAATGGTTCGCGGAGG
CCGACGCAGTTGTTTTTGTCGGCACATCGTTCGCCGTCACGCTAACTTCG
TTGGCCATACGCGAGGCGAAGCGTCGCTGCGTCCCAGTGTTTGACTTCAA
CGTCTCTGTGTGCCTCAAGGCATCCCCGTCTTTCAACGCCAAGACTGTTC
TCGGCCCCGCGGAGGCCACGCTCCCGGCCCTCGCCAGGCTGGCGGGGGTC
CCTATTTTTACGGGCGACCAAGACTACAGCAGCACTAGCGTCAGCAGCAC
CAGCCCGCCGATCTCGCCCACGGTCGAGCAGCAGTTGCAAGAGAAAAAGC
AGCGGGAGGAAGTGAGGGGAAACAGCGAAGACGATGAGTCTCCGCTAGGC
CGACGACCGCGCGATGGGAGTTCCAACGACGACGGCGACGCGGGTGACGC
AAAGGTTGCGAGGTATTTTCCCGGCGGTGGCGCCACACACGGCGGGGATG
CCGCTGGTGGGCCAGCGATGGCCGCGGCGGCAGCGGCAGCGGCTGCCGCT
GTGGATGATAAGGCGGGAGTCTGGGGTGGGGGCGCGAAGTACTTGCTGGA
GCCGGTTTTGGAGCCGCCGCTGCGGAAGGATCAAGTGCGCGTAGATCTAT
CCGAGGCGTACTCGCGGAAACCGCACCCCGATCCAGAGCGTTGGCCATAC
GCGAGGCGAAGCGTCGCTGCGTCCCAGTGTTTGACTTCAACGTCTCTGTG
TGCCTCAAGGCATCCCCGTCTTTCAACGCCAAGACTGTTCTCGGCCCCGC
GGAGGCCACGCTCCCGGCCCTCGCCAGGCTGGCGGGGGTCCCTATTTTTA
CGGGCGACCAAGACTACAGCAGCACTAGCGTCAGCAGCACCAGCCCGCCG
ATCTCGCCCACGGTCGAGCAGCAGTTGCAAGAGAAAAAGCAGCGGGAGGA
AGTGAGGGGAAACAGCGAAGACGATGAGTCTCCGCTAGGCCGACGACCGC
GCGATGGGAGTTCCAACGACGACGGCGACGCGGGTGACGCAAAGGTTGCG
AGGTATTTTCCCGGCGGTGGCGCCACACACGGCGGGGATGCCGCTGGTGG
GCCAGCGATGGCCGCGGCGGCAGCGGCAGCGGCTGCCGCTGTGGATGATA
AGGCGGGAGTCTGGGGTGGGGGCGCGAAGTACTTGCTGGAGCCGGTTTTG
GAGCCGCCGCTGCGGAAGGATCAAGTGCGCGTAGATCTATCCGAGGCGTA
CTCGCGGAAACCGCACCCCGATCCAGAGCAGCAGCTCGTCAAGAGCCCCC
TCCTGTTCAACGGTACGAAGTTTCGCCTGGCGGGGTACTCCACCGAGGGC
GACCACTCCGGTGCCTCAGCTCCCACCGCTGCCCCGGAAGTCGATTCCGC
GGAAAATATGGACTCAGACGGAGGAGGAGACTCTTCAGGAAAAACCTCGC
CGAGGGCTCGGGCGCGGTCCCCGTGTTATACTCCCCCGACCAAGATGCTC
AGGTTGCAGCTCGGCCTGACCGATTATCGCACGTTTCGAGCAGCAGCTCG
TCAAGAGCCCCCTCCTGTTCAACGGTACGAAGTTTCGCCTGGCGGGGTAC
TCCACCGAGGGCGACCACTCCGGTGCCTCAGCTCCCACCGCTGCCCCGGA
AGTCGATTCCGCGGAAAATATGGACTCAGACGGAGGAGGAGACTCTTCAG
GAAAAACCTCGCCGAGGGCTCGGGCGCGGTCCCCGTGTTATACTCCCCCG
ACCAAGATGCTCAGGTTGCAGCTCGGCCTGACCGATTATCGCACGTTTCG
AGGAACTAACTGGTCCCCGGCAGCGTCCAGACTTGCGGCGGACAGTGCGC
GCGATTTCCCATGGTTAGAGGGGGCTTACCTCTCTCAGAAGCTTGGCGTG
ACGGCAATCGTGGAAACTGTGGACGGCTTTCTGCTTTCCCTCTGTCGAAG
CAGTGGAGTGGCGGAAGGACAGGGGATGCTGGGTGCGCCAGGTGGACACC
CCGAGCCCAAGGTTGGTGGGGGAAAAAACTACCAGTACTAAGAACTAACT
GGTCCCCGGCAGCGTCCAGACTTGCGGCGGACAGTGCGCGCGATTTCCCA
TGGTTAGAGGGGGCTTACCTCTCTCAGAAGCTTGGCGTGACGGCAATCGT
GGAAACTGTGGACGGCTTTCTGCTTTCCCTCTGTCGAAGCAGTGGAGTGG
CGGAAGGACAGGGGATGCTGGGTGCGCCAGGTGGACACCCCGAGCCCAAG
GTTGGTGGGGGAAAAAACTACCAGTACTAA
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