mRNA_F-distichus_contig97071.19158.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig97071.19158.1 vs. uniprot
Match: A0A6H5JP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP11_9PHAE) HSP 1 Score: 235 bits (600), Expect = 6.460e-67 Identity = 183/518 (35.33%), Postives = 227/518 (43.82%), Query Frame = 1
Query: 1 VRLHVPLGASAVVFAVPCPLKGHRPDVSVIPGGIMRMDTSLCSPRRCHLLLPFDQLYACHAAAIVHHRMGWRHHEVGKVHVSEMEMTLRAAQNCGFHASLDRQQPFSPPST--------------------GVVQDHEKQDRRRRLGERPS--------PYNEAFLPRPS--AGATPL-----------------------------------------------------------------RDPTYHAAGNFVASTEDLPATSMKNTVEI----------VTTTSQTLPQPGERATQIEVFRGGGGRAAPLADATGLT-----LEGSFSVAATEVAPTVATASDGTEGDEGDLLRMRISSLPKPVPA--PPEHCRVVVVGGGASGLSVAACLRCRGEESVLVLERSDKIRGVWSNQYEDLSITTRRAYCGLPGWPVPP-------------------NDGNV----------------------MSAEGFVRYLEGYRRRFDVDIVMGAEVFRADR 1095
VRLH+PL ASAVVFAVPCPL+GHRPDV+ + GGI+RMD S C+ RR H+LLPFDQLYACHAAAIVHHRMGW HHEVGKV V M L+AA +CGF PFS PS+ G V+ D + + E S P +PRP AG T R+ AAG ++E + T N + V T++ P G+R Q + G R + G++ + ++TE P GT E D S +P P PP +CRV+VVG GASGLS AACLR RGE+ V++LERS+ + G W+ QYE L ITTRR +CGLPGWPVPP N+ NV MSA+ FVRYL YRRRF + + EV A+R
Sbjct: 32 VRLHIPLKASAVVFAVPCPLEGHRPDVTSVTGGIVRMDLSCCTARRFHVLLPFDQLYACHAAAIVHHRMGWAHHEVGKVDVGRMATILKAAGDCGFSV------PFSSPSSPAAGNTAITTSKLPRHDDVIGGVESGNTTDPEQPVEEYYSGEFKEVTRPGEGGMVPRPRGVAGGTARWREXXXXXXXXXXXXTVTTGRSGHDSGCGDGTSAAVSLGXXXXXXXXXXXXXXXXXXXXXXGMLPREIEVQAAGQTARTSEKM--TIFLNQAGVQQKHHCNDADVQATAR-APSTGQRDPQDRIPATGASRNELRENCDGISPASPPFDTGSGESSTERTPGSLGVRVGTGLSEMDCPARGYSDGEEPQPRRRPPAYCRVIVVGAGASGLSAAACLRARGEDGVVILERSESVCGAWARQYEGLRITTRRRHCGLPGWPVPPEGFCDNGFDNGCADDTAPANNTNVASGFYINSNSSNGNHAVGAGDEMSAQSFVRYLRAYRRRFGLAVFTETEVLGAER 540
BLAST of mRNA_F-distichus_contig97071.19158.1 vs. uniprot
Match: D8LAY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY8_ECTSI) HSP 1 Score: 186 bits (473), Expect = 2.790e-49 Identity = 160/476 (33.61%), Postives = 193/476 (40.55%), Query Frame = 1
Query: 109 MDTSLCSPRRCHLLLPFDQLYACHAAAIVHHRMGWRHHEVGKVHVSEMEMTLRAAQNCGFHASLDRQQPFSPPST--------------------GVVQDHEKQDRRRRLGERPS--------PYNEAFLPRP---SAGATPLRDPTYH--------------------AAGNFVASTEDLPATSMKNTVEIVTTTSQTLPQPGERATQIEVFRGGGGRA-------------------------------APLAD---------ATGLTLEG-----------------SFSVAATEVAPTVATASDGTEGDEGDLLRMRISSLPKPVPA--PPEHCRVVVVGGGASGLSVAACLRCRGEESVLVLERSDKIRGVWSNQYEDLSITTRRAYCGLPGWPVPP-------------------------------ND------GNVMSAEGFVRYLEGYRRRFDVDIVMGAEVFRADR 1095
MD S C+PRR H+LLPFDQLYACHAAAIVHHRMGW HHEVGKV V M L+AA +CGF PFS PS+ G V+ D + E S P +PRP + GA R+ G A+ + T V P PG + IE F+ G A AP ATG + G S+ ++ E P GT E D S + +P P PP +CRVVVVGGGASGLS AACLR RGE+ V++LERS+ + G W+ QYE L ITTRR +CGLPGWPVPP ND G+ MSA+ FVRYL YRRRF + + EV A+R
Sbjct: 1 MDLSCCTPRRFHVLLPFDQLYACHAAAIVHHRMGWAHHEVGKVDVGRMATILKAAGDCGFSV------PFSWPSSPAAGTTAITISKPPRHDDFVGGVESGNTTDSEEPVDEYYSGEFKGVTRPGEGGVMPRPRGVAGGAARWREEGXXXXXXXXXXSVTTGRSGHDNGCGGGTSAAVSNGEGGMRSRTTSPVPGLGPPSPSPGMLPSDIE-FQAAGQTARTPGIMAIFPNQAGVQKKYHCNDADVQATTRAPFTGPRDPQDRIPATGASRNGLRESCDGISPAPPPLDTSWRESSKERIPGSLGVRVGTGVSEMDCPARGYSDVAEPQPRRRPPAYCRVVVVGGGASGLSAAACLRARGEDGVVILERSESLCGAWARQYEGLRITTRRRHCGLPGWPVPPEGFCDNGCADDIAPANNTNAGSGFTIDSNSSNDNHATGAGDEMSAQSFVRYLRAYRRRFGLAVFTETEVLGAER 469
BLAST of mRNA_F-distichus_contig97071.19158.1 vs. uniprot
Match: L1J6G4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6G4_GUITC) HSP 1 Score: 99.8 bits (247), Expect = 4.450e-19 Identity = 52/111 (46.85%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 1 VRLHVPLGASAVVFAVPCPLKGH---------------RPDVSVIPGGIMRMDTSLCSPRRCHLLLPFDQLYACHAAAIVHHRMGWRHHEVGKVHVSEMEMTLRAAQNCGF 288
VR H+P AVVF+VPCPL G+ R DV+VI GG++RM CS R +LLP ++YACHAAA+VH MGW HEVG+V +S++ + L AA+ GF
Sbjct: 629 VREHIPRDGIAVVFSVPCPLTGNVLSVESAMNSRYIRERKDVTVIDGGLLRMQPERCSKRSFSILLPEHEVYACHAAAMVHANMGWDEHEVGEVDLSKLPVVLHAAKAMGF 739
BLAST of mRNA_F-distichus_contig97071.19158.1 vs. uniprot
Match: UPI00058EC60A (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Actinoplanes globisporus TaxID=113565 RepID=UPI00058EC60A) HSP 1 Score: 82.0 bits (201), Expect = 1.180e-13 Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 1
Query: 796 VVVVGGGASGLSVAACLRCRGEESVLVLERSDKIRGVWSNQYEDLSITTRRAYCGLPGWPVPPNDGNVMSAEGFVRYLEGYRRRFDVDIVMGAEV 1080
V V+G GA+GL+VAA L+ RG + V VLER + W +Y+ L + T R+ GLPG+P+P G +S + VRYLE Y RF +D+ G V
Sbjct: 4 VTVLGAGAAGLAVAAQLKARGVDCV-VLERGPGVATSWRGRYDRLHLHTIRSLSGLPGFPIPKQYGRWVSRDDLVRYLEAYTERFGIDVRTGTTV 97
BLAST of mRNA_F-distichus_contig97071.19158.1 vs. uniprot
Match: UPI001FE34E02 (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Actinoplanes bogorensis TaxID=1610840 RepID=UPI001FE34E02) HSP 1 Score: 80.5 bits (197), Expect = 3.910e-13 Identity = 43/97 (44.33%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 796 VVVVGGGASGLSVAACLRCRGEESVLVLERSDKIRGVWSNQYEDLSITTRRAYCGLPGWPVPPNDGNVMSAEGFVRYLEGYRRRFDVDIVMGAEVFR 1086
V+V+G GA+GL+VAA L+ RG +SV VLER + W +Y+ L + T R GLPG+ +P G + + VRYLE Y RFD+D+ G V R
Sbjct: 4 VMVLGAGAAGLAVAAQLKLRGVDSV-VLERGPGVGTSWRGRYDRLRLHTIRGLSGLPGFGIPREYGRWVRRDDLVRYLEAYAERFDLDVRTGTTVTR 99
BLAST of mRNA_F-distichus_contig97071.19158.1 vs. uniprot
Match: S3B9C3_9ACTN (Uncharacterized protein n=9 Tax=Streptomyces TaxID=1883 RepID=S3B9C3_9ACTN) HSP 1 Score: 79.3 bits (194), Expect = 1.070e-12 Identity = 48/117 (41.03%), Postives = 62/117 (52.99%), Query Frame = 1
Query: 754 SLPKPVP---APPEHCRVVVVGGGASGLSVAACLRCRGEESVLVLERSDKIRGVWSNQYEDLSITTRRAYCGLPGWPVPPNDGNVMSAEGFVRYLEGYRRRFDVDIVMGAEVFRADR 1095
S+P VP P V V+G G GL+VAA LR RG ++ LVLERSD + W + YE L + T RA LPG +P G ++ VRYLE Y + + G EV R +R
Sbjct: 2 SMPSAVPESAGPDSGAPVHVIGAGPGGLAVAAALRARGVDA-LVLERSDAVGTSWRHHYERLHLHTTRAGSALPGLRIPRRYGRWVARADLVRYLEQYAEHHRLRVATGVEVRRLER 117
BLAST of mRNA_F-distichus_contig97071.19158.1 vs. uniprot
Match: A0A835V944_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835V944_VANPL) HSP 1 Score: 79.3 bits (194), Expect = 1.090e-12 Identity = 44/101 (43.56%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 793 RVVVVGGGASGLSVAACLRCRGEESVLVLERSDKIRGVWSNQ-YEDLSITTRRAYCGLPGWPVPPNDGNVMSAEGFVRYLEGYRRRFDVDIVMGAEVFRAD 1092
R ++VG G SG++VAACL+ +G +S LVLERSD I +W ++ Y+ L + + YC LP P PP + FV Y+E Y RRFDV V V A+
Sbjct: 30 RPIIVGAGPSGIAVAACLKAKGIDS-LVLERSDCIASLWQHRAYDRLRLHLPKRYCELPLAPYPPRFPTYPTKPQFVAYVESYARRFDVQPVFRQNVVCAE 129
BLAST of mRNA_F-distichus_contig97071.19158.1 vs. uniprot
Match: UPI00193B2797 (NAD(P)-binding domain-containing protein n=1 Tax=Actinoplanes ovalisporus TaxID=2810368 RepID=UPI00193B2797) HSP 1 Score: 75.9 bits (185), Expect = 1.350e-12 Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = 1
Query: 796 VVVVGGGASGLSVAACLRCRGEESVLVLERSDKIRGVWSNQYEDLSITTRRAYCGLPGWPVPPNDGNVMSAEGFVRYLEGYRRRFDVDIVMGAEVFR 1086
V V+G GA+GL+VAA L+ RG E+V VLER + W +Y+ L + T R GLPG+ +P G + + VRYLE Y RF +D+ V R
Sbjct: 4 VTVLGAGAAGLAVAAQLKARGVETV-VLERGPAVATSWRGRYDRLRLHTVRRLSGLPGFAIPRQYGRWVRRDDLVRYLEAYAERFGLDVRTSTTVER 99
BLAST of mRNA_F-distichus_contig97071.19158.1 vs. uniprot
Match: UPI001A47E76A (Monooxygenase n=4 Tax=Actinoplanes TaxID=1865 RepID=UPI001A47E76A) HSP 1 Score: 78.6 bits (192), Expect = 1.890e-12 Identity = 43/102 (42.16%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 781 PEHCRVVVVGGGASGLSVAACLRCRGEESVLVLERSDKIRGVWSNQYEDLSITTRRAYCGLPGWPVPPNDGNVMSAEGFVRYLEGYRRRFDVDIVMGAEVFR 1086
P VVV+G GA+GL+VAA L+ RG ++V VLER + W +Y+ L + T R GLPG +P G + + VRYLE Y +RF +D+ G V R
Sbjct: 11 PRMADVVVLGAGAAGLAVAAQLKARGVDAV-VLERGPGVATSWRGRYDRLKLHTVRRLSGLPGSAIPRGYGRWVRRDDLVRYLEAYAQRFGLDVRTGTAVER 111
BLAST of mRNA_F-distichus_contig97071.19158.1 vs. uniprot
Match: A0A8J4DXQ6_9ACTN (Monooxygenase n=2 Tax=Virgisporangium aliadipatigenens TaxID=741659 RepID=A0A8J4DXQ6_9ACTN) HSP 1 Score: 78.2 bits (191), Expect = 2.310e-12 Identity = 41/97 (42.27%), Postives = 57/97 (58.76%), Query Frame = 1
Query: 796 VVVVGGGASGLSVAACLRCRGEESVLVLERSDKIRGVWSNQYEDLSITTRRAYCGLPGWPVPPNDGNVMSAEGFVRYLEGYRRRFDVDIVMGAEVFR 1086
+ V+G GA+GL+VAA L+ RG +SV VLER + W +Y+ L + T R GLPG +P G + + VRYLE Y +F +D+ GA V R
Sbjct: 1 MTVIGAGAAGLAVAARLKARGVDSV-VLERGPGVAASWRGRYDRLRLHTTRRLSGLPGLAIPREYGRWVRRDDLVRYLEAYAEKFGLDVRTGATVER 96 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig97071.19158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig97071.19158.1 >prot_F-distichus_contig97071.19158.1 ID=prot_F-distichus_contig97071.19158.1|Name=mRNA_F-distichus_contig97071.19158.1|organism=Fucus distichus monoicous|type=polypeptide|length=365bp VRLHVPLGASAVVFAVPCPLKGHRPDVSVIPGGIMRMDTSLCSPRRCHLLback to top mRNA from alignment at F-distichus_contig97071:213..2162- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig97071.19158.1 ID=mRNA_F-distichus_contig97071.19158.1|Name=mRNA_F-distichus_contig97071.19158.1|organism=Fucus distichus monoicous|type=mRNA|length=1950bp|location=Sequence derived from alignment at F-distichus_contig97071:213..2162- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig97071:213..2162- >mRNA_F-distichus_contig97071.19158.1 ID=mRNA_F-distichus_contig97071.19158.1|Name=mRNA_F-distichus_contig97071.19158.1|organism=Fucus distichus monoicous|type=CDS|length=2190bp|location=Sequence derived from alignment at F-distichus_contig97071:213..2162- (Fucus distichus monoicous)back to top |