mRNA_F-distichus_contig96882.19138.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig96882.19138.1 vs. uniprot
Match: D8LFH4_ECTSI (Short-chain dehydrogenase/reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFH4_ECTSI) HSP 1 Score: 192 bits (489), Expect = 1.000e-57 Identity = 95/116 (81.90%), Postives = 105/116 (90.52%), Query Frame = 1
Query: 28 DLQVKCLFEKVEAEQGRLDVLVNNAFALGEGPQLKTKFWEQGAQAWDALMTVGLRSHYIASCFAAPLMIKSSAKGKGGKPGLIACISSFGGLTYSFNVAYGVGKAGVDRLAKDMAV 375
D QVK LFE+VE+EQGRLD+LVNNAFALG G QL+ KFW QGA AWD+L+TVGLRSHY+ASCFAAPLMIKS K +GGKPGLIAC+SSFGGL YSFNVAYGVGKAGVDRLAKDMA+
Sbjct: 160 DEQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKS-VKDRGGKPGLIACVSSFGGLAYSFNVAYGVGKAGVDRLAKDMAI 274
BLAST of mRNA_F-distichus_contig96882.19138.1 vs. uniprot
Match: D8LFI0_ECTSI (Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI0_ECTSI) HSP 1 Score: 157 bits (398), Expect = 1.050e-46 Identity = 77/96 (80.21%), Postives = 86/96 (89.58%), Query Frame = 1
Query: 28 DLQVKCLFEKVEAEQGRLDVLVNNAFALGEGPQLKTKFWEQGAQAWDALMTVGLRSHYIASCFAAPLMIKSSAKGKGGKPGLIACISSFGGLTYSF 315
D QVK LFEKVE+EQGRLD+LVNNAFALG G QL+ KFW QGA AWD+L+TVGLRSHY+ASCFAAPLMIKS K +GGKPGLIAC+SSFGGLTYS+
Sbjct: 90 DEQVKALFEKVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYVASCFAAPLMIKS-VKDRGGKPGLIACVSSFGGLTYSW 184
BLAST of mRNA_F-distichus_contig96882.19138.1 vs. uniprot
Match: A0A7S3USF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USF7_HETAK) HSP 1 Score: 137 bits (344), Expect = 1.260e-36 Identity = 73/126 (57.94%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 25 DDLQVKCLFEKVEAEQGRLDVLVNNAFALGEGPQLKTKFWEQGAQAWDALMTVGLRSHYIASCFAAPLMIKS-----SAKGK--GGKPG--LIACISSFGGLTYSFNVAYGVGKAGVDRLAKDMAV 375
+D Q + +FE+V++ +GRLD+LVNNAFA+ + L T FWEQGA+ WDA TVGLRSHY+ SC A P+M+++ A+G GG+ LI ISSFGGL+Y+FNVAYGVGKAGVDRL KDM V
Sbjct: 100 NDEQTRAVFEQVQSREGRLDILVNNAFAIPKQKDLFTNFWEQGAEIWDACHTVGLRSHYLCSCHAVPVMLQNPPLVQGARGDFGGGRKTNPLIVGISSFGGLSYTFNVAYGVGKAGVDRLIKDMDV 225
BLAST of mRNA_F-distichus_contig96882.19138.1 vs. uniprot
Match: A0A523M6T0_9GAMM (SDR family NAD(P)-dependent oxidoreductase n=2 Tax=Bacteria TaxID=2 RepID=A0A523M6T0_9GAMM) HSP 1 Score: 129 bits (324), Expect = 1.400e-34 Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 1
Query: 25 DDLQVKCLFEKVEAEQGRLDVLVNNAFALGEGPQLKTKFWEQGAQAWDALMTVGLRSHYIASCFAAPLMIKSSAKGKGGKPGLIACISSFGGLTYSFNVAYGVGKAGVDRLAKDMAV 375
DD V+ LFE+VE EQGRLDVLVNNA+ + + P + FWE G AWD VGLR HY+AS + APLM++ ++ GLI ISS GG Y F+VAYGVGKAGVDR+AKDMAV
Sbjct: 74 DDGAVRALFERVEREQGRLDVLVNNAYKIPDPPIWEGGFWEHGLSAWDDQCGVGLRGHYVASVYGAPLMVRQNS-------GLIVNISSRGGAQYVFSVAYGVGKAGVDRMAKDMAV 183
BLAST of mRNA_F-distichus_contig96882.19138.1 vs. uniprot
Match: A0A8J9X4G2_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X4G2_PHATR) HSP 1 Score: 130 bits (328), Expect = 1.680e-34 Identity = 67/119 (56.30%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 28 DLQVKCLFEKVEAEQGRLDVLVNNAFALGEG--PQLKTKFWEQGAQAWDALMTVGLRSHYIASCFAAPLMIKSSAKGKGGKPG-LIACISSFGGLTYSFNVAYGVGKAGVDRLAKDMAV 375
D +VK L +++E + GRLD+L+NNAF L +G L KFWEQG + WD L TVGLRSH++AS +A PL+ + + P + +SSFGGLTY+FNV YGVGKAGVDRLAKDMAV
Sbjct: 83 DSEVKHLMDRIERDHGRLDILINNAFRLPQGGVEMLYKKFWEQGPEIWDTLHTVGLRSHFVASVYAMPLLQAAKKNPQRNLPRPFVGMVSSFGGLTYTFNVPYGVGKAGVDRLAKDMAV 201
BLAST of mRNA_F-distichus_contig96882.19138.1 vs. uniprot
Match: A0A520R096_9DELT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Sandaracinaceae bacterium TaxID=2510337 RepID=A0A520R096_9DELT) HSP 1 Score: 121 bits (303), Expect = 2.600e-31 Identity = 64/116 (55.17%), Postives = 76/116 (65.52%), Query Frame = 1
Query: 25 DDLQVKCLFEKVEAEQGRLDVLVNNAFALGEGPQLKTKFWEQGAQAWDALMTVGLRSHYIASCFAAPLMIKSSAKGKGGKPGLIACISSFGGLTYSFNVAYGVGKAGVDRLAKDMA 372
DD V+ LF +V E GRLDVLVNN F + + FWEQ WD + T+GLRSHY+AS FAAPLM+++ GLIA +SSF G + NVAYGVGKAGVDRLA DMA
Sbjct: 68 DDAAVETLFGRVRDEAGRLDVLVNNVFTIPKERMWGVPFWEQPIHMWDQMHTIGLRSHYVASVFAAPLMVEAGR-------GLIANVSSFAGAGFQLNVAYGVGKAGVDRLAADMA 176
BLAST of mRNA_F-distichus_contig96882.19138.1 vs. uniprot
Match: A0A428ZNU2_KIBAR (Short-chain dehydrogenase n=1 Tax=Kibdelosporangium aridum TaxID=2030 RepID=A0A428ZNU2_KIBAR) HSP 1 Score: 120 bits (300), Expect = 8.640e-31 Identity = 62/117 (52.99%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 25 DDLQVKCLFEKVEAEQGRLDVLVNNAFALGE-GPQLKTKFWEQGAQAWDALMTVGLRSHYIASCFAAPLMIKSSAKGKGGKPGLIACISSFGGLTYSFNVAYGVGKAGVDRLAKDMA 372
DD QVK +F ++EAE GRLD+LVNN F+ + P L FW +AWD ++ +GLRSHY+AS FA PL++K+ +P +I ISS G TYS NV YGVGKAGVD+L DMA
Sbjct: 73 DDDQVKAVFARLEAEHGRLDILVNNVFSAADIAPWLNRPFWTLPVEAWDQVIDIGLRSHYVASVFAVPLLMKAD------RPAVIVNISSPGATTYSHNVVYGVGKAGVDKLTADMA 183
BLAST of mRNA_F-distichus_contig96882.19138.1 vs. uniprot
Match: A0A6I2X5L8_9ACTN (SDR family NAD(P)-dependent oxidoreductase n=2 Tax=root TaxID=1 RepID=A0A6I2X5L8_9ACTN) HSP 1 Score: 119 bits (298), Expect = 1.610e-30 Identity = 63/124 (50.81%), Postives = 83/124 (66.94%), Query Frame = 1
Query: 7 HHFRVLDDLQVKCLFEKVEAEQGRLDVLVNNAFALGE-GPQLKTKFWEQGAQAWDALMTVGLRSHYIASCFAAPLMIKSSAKGKGGKPGLIACISSFGGLTYSFNVAYGVGKAGVDRLAKDMAV 375
HH DD QV+ +FE+++AEQGRLDVLVNN ++ + P L KFWE AWD ++ +G RSHY+AS F APLM ++ + GLI +SS G +TY+ NV YGVGKA VD++ DMAV
Sbjct: 68 HH----DDDQVRAVFERIDAEQGRLDVLVNNVYSAPDLVPWLNKKFWELPIGAWDQVIDIGTRSHYVASVFGAPLMFRNGS-------GLIVNVSSSGAVTYAHNVVYGVGKAAVDKMTADMAV 180
BLAST of mRNA_F-distichus_contig96882.19138.1 vs. uniprot
Match: A0A7S1XYU6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYU6_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.700e-30 Identity = 71/119 (59.66%), Postives = 81/119 (68.07%), Query Frame = 1
Query: 25 DDLQVKCLFEKVEAEQ-GRLDVLVNNAFALGEGPQLKT--KFWEQGAQAWDALMTVGLRSHYIASCFAAPLMIKSSAKGKGGKPGLIACISSFGGLTYSFNVAYGVGKAGVDRLAKDMA 372
DD V LFE+V AE G LD+LVNNAF+ G KFWEQG + WDA VGLRSHY+ASC A PL+ KS G P LI +SSFGGL+Y+FNVAYGV KAGVDRL+KD A
Sbjct: 68 DDAAVASLFEQVAAENDGALDLLVNNAFSGVTGLSCDPFGKFWEQGEEMWDACAGVGLRSHYVASCKAVPLLRKSQ-----GTP-LIVNVSSFGGLSYTFNVAYGVAKAGVDRLSKDCA 180
BLAST of mRNA_F-distichus_contig96882.19138.1 vs. uniprot
Match: A0A2E8J1S6_9GAMM (Short-chain dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8J1S6_9GAMM) HSP 1 Score: 119 bits (297), Expect = 1.900e-30 Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 1
Query: 25 DDLQVKCLFEKVEAEQGRLDVLVNNAFALGEGPQLKTKFWEQGAQAWDALMTVGLRSHYIASCFAAPLMIKSSAKGKGGKPGLIACISSFGGLTYSFNVAYGVGKAGVDRLAKDMA 372
DD Q+ L ++VE EQ +D+LVNNAF + + P TKFWE WD L VG R HY+ASC AA M++ + GLI ISSF G +Y FNVAYGVGKA VDR+AKDMA
Sbjct: 71 DDDQIAALIKRVEDEQSGIDILVNNAFTVPDEPIFSTKFWEMPVGIWDQLHRVGCRGHYVASCAAASKMVER-------RTGLIVNISSFAGASYIFNVAYGVGKAAVDRMAKDMA 179 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96882.19138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig96882.19138.1 >prot_F-distichus_contig96882.19138.1 ID=prot_F-distichus_contig96882.19138.1|Name=mRNA_F-distichus_contig96882.19138.1|organism=Fucus distichus monoicous|type=polypeptide|length=125bp MVHHFRVLDDLQVKCLFEKVEAEQGRLDVLVNNAFALGEGPQLKTKFWEQback to top mRNA from alignment at F-distichus_contig96882:751..2130+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig96882.19138.1 ID=mRNA_F-distichus_contig96882.19138.1|Name=mRNA_F-distichus_contig96882.19138.1|organism=Fucus distichus monoicous|type=mRNA|length=1380bp|location=Sequence derived from alignment at F-distichus_contig96882:751..2130+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig96882:751..2130+ >mRNA_F-distichus_contig96882.19138.1 ID=mRNA_F-distichus_contig96882.19138.1|Name=mRNA_F-distichus_contig96882.19138.1|organism=Fucus distichus monoicous|type=CDS|length=750bp|location=Sequence derived from alignment at F-distichus_contig96882:751..2130+ (Fucus distichus monoicous)back to top |