mRNA_F-distichus_contig96821.19133.1 (mRNA) Fucus distichus monoicous
|
Overview
Homology
BLAST of mRNA_F-distichus_contig96821.19133.1 vs. uniprot
Match: D7FJW4_ECTSI (Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJW4_ECTSI) HSP 1 Score: 230 bits (586), Expect = 1.320e-70 Identity = 123/147 (83.67%), Postives = 131/147 (89.12%), Query Frame = 1
Query: 1 GTGKTMLAKAVATESGYAFFNISASSLTQKLFGEGEKMVRALFSVARSRQPAVIFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGVGSGDGEAERLLVLAATNLPQELDEAVLRRLSRRVYVPLPDPEARRALLSKLLDKHKASI 441
GTGKTMLAKAVATESGYAFFNISASSLT K GEGEKMVRALF+VAR R+PAV+FIDEIDSVLSARGEGEHEASRRLKTEFLVQLDG G G + RLLVLAATNLPQELDEA LRRLSRRVYVPLPDP AR+AL+S LL + K +I
Sbjct: 304 GTGKTMLAKAVATESGYAFFNISASSLTSKYVGEGEKMVRALFAVAREREPAVVFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGAGQGGDD--RLLVLAATNLPQELDEAALRRLSRRVYVPLPDPPARKALISGLLGQQKGNI 448
BLAST of mRNA_F-distichus_contig96821.19133.1 vs. uniprot
Match: A0A835YKR4_9STRA (Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR4_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.890e-59 Identity = 105/148 (70.95%), Postives = 124/148 (83.78%), Query Frame = 1
Query: 1 GTGKTMLAKAVATESGYAFFNISASSLTQKLFGEGEKMVRALFSVARSRQPAVIFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGVGSG-DGEAERLLVLAATNLPQELDEAVLRRLSRRVYVPLPDPEARRALLSKLLDKHKASI 441
GTGKTMLAKAVATES + FF+ISASSLT K GEGEK+VRALF AR+R+P+V+F+DEIDS+LSARG GEHEASRRLKTEF+VQLDG +G +G+ LLV+ ATNLP ELDEAVLRRL+RRVYVPLPD AR AL+++LL A +
Sbjct: 182 GTGKTMLAKAVATESNFTFFSISASSLTSKYVGEGEKLVRALFRAARARRPSVVFVDEIDSLLSARGAGEHEASRRLKTEFMVQLDGACTGGEGDEGGLLVMGATNLPWELDEAVLRRLARRVYVPLPDGAARAALVARLLRGQSARL 329
BLAST of mRNA_F-distichus_contig96821.19133.1 vs. uniprot
Match: A0A7S2SB50_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SB50_9STRA) HSP 1 Score: 196 bits (498), Expect = 2.600e-59 Identity = 102/148 (68.92%), Postives = 122/148 (82.43%), Query Frame = 1
Query: 1 GTGKTMLAKAVATESGYAFFNISASSLTQKLFGEGEKMVRALFSVARSRQPAVIFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGVGSGDG--EAERLLVLAATNLPQELDEAVLRRLSRRVYVPLPDPEARRALLSKLLDKHKAS 438
GTGKT+LAKAVA+ESG+ FF++SASSLT K GEGEK+VR LFS+AR QPAV+FIDE+DSVLS RG EHEASRRLKTEF+VQLDG +G E E++LV+ ATNLP ELD+AVLRRL RRVYVPLPD EAR ALL +L ++++
Sbjct: 120 GTGKTLLAKAVASESGFHFFSVSASSLTSKWVGEGEKIVRTLFSLAREMQPAVVFIDEVDSVLSRRGGSEHEASRRLKTEFMVQLDGAAAGGAGQEQEKILVMGATNLPHELDDAVLRRLPRRVYVPLPDAEARAALLDRLFPTNRSN 267
BLAST of mRNA_F-distichus_contig96821.19133.1 vs. uniprot
Match: A0A7S2WMC1_9STRA (Vesicle-fusing ATPase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMC1_9STRA) HSP 1 Score: 196 bits (498), Expect = 2.790e-57 Identity = 102/148 (68.92%), Postives = 122/148 (82.43%), Query Frame = 1
Query: 1 GTGKTMLAKAVATESGYAFFNISASSLTQKLFGEGEKMVRALFSVARSRQPAVIFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGVGSGDG--EAERLLVLAATNLPQELDEAVLRRLSRRVYVPLPDPEARRALLSKLLDKHKAS 438
GTGKT+LAKAVA+ESG+ FF++SASSLT K GEGEK+VR LFS+AR QPAV+FIDE+DSVLS RG EHEASRRLKTEF+VQLDG +G E E++LV+ ATNLP ELD+AVLRRL RRVYVPLPD EAR ALL +L ++++
Sbjct: 329 GTGKTLLAKAVASESGFHFFSVSASSLTSKWVGEGEKIVRTLFSLAREMQPAVVFIDEVDSVLSRRGGSEHEASRRLKTEFMVQLDGAAAGGAGQEQEKILVMGATNLPHELDDAVLRRLPRRVYVPLPDAEARAALLDRLFPTNRSN 476
BLAST of mRNA_F-distichus_contig96821.19133.1 vs. uniprot
Match: A0A024TWQ4_9STRA (Fidgetin-like protein 1, variant 4 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWQ4_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.110e-55 Identity = 97/147 (65.99%), Postives = 118/147 (80.27%), Query Frame = 1
Query: 1 GTGKTMLAKAVATESGYAFFNISASSLTQKLFGEGEKMVRALFSVARSRQPAVIFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGVGSGDGEAERLLVLAATNLPQELDEAVLRRLSRRVYVPLPDPEARRALLSKLLDKHKASI 441
GTGKTMLAKAVATES FF+++AS+LT K GEGEK+VRALF +AR QP+VIF+DEIDS+LS R GEH+A+RRLK EFL+QLDGVGS +R+LVL ATNLP +LDEA++RRL +RVYVPLPD AR+ L+ LL HK S+
Sbjct: 182 GTGKTMLAKAVATESHATFFSVTASTLTSKWVGEGEKLVRALFDMARELQPSVIFLDEIDSLLSIRSAGEHDAARRLKNEFLIQLDGVGSSS--EDRILVLGATNLPHDLDEAIVRRLEKRVYVPLPDEAARKYLIGHLLRPHKHSL 326
BLAST of mRNA_F-distichus_contig96821.19133.1 vs. uniprot
Match: UPI001C4B3A96 (spastin-like n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4B3A96) HSP 1 Score: 182 bits (461), Expect = 1.990e-55 Identity = 98/147 (66.67%), Postives = 114/147 (77.55%), Query Frame = 1
Query: 1 GTGKTMLAKAVATESGYAFFNISASSLTQKLFGEGEKMVRALFSVARSRQPAVIFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGVGSGDGEAERLLVLAATNLPQELDEAVLRRLSRRVYVPLPDPEARRALLSKLLDKHKASI 441
G GKTMLAKAVA ES FFNISA+SLT K GEGEK+VRALFSVAR QP++IFIDE+DS+L R EGE +ASRRLKTEFL++ DGV SG E R+LV+ ATN PQELD+AVLRR ++RVYV LP E R LL LL KH +S+
Sbjct: 50 GNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERREGEQDASRRLKTEFLIEFDGVQSGGDE--RVLVMGATNRPQELDQAVLRRFTKRVYVALPVEETRFQLLKNLLGKHSSSL 194
BLAST of mRNA_F-distichus_contig96821.19133.1 vs. uniprot
Match: A0A8C4DRH0_DICLA (Spastin n=1 Tax=Dicentrarchus labrax TaxID=13489 RepID=A0A8C4DRH0_DICLA) HSP 1 Score: 184 bits (467), Expect = 3.210e-55 Identity = 98/143 (68.53%), Postives = 114/143 (79.72%), Query Frame = 1
Query: 1 GTGKTMLAKAVATESGYAFFNISASSLTQKLFGEGEKMVRALFSVARSRQPAVIFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGVGSGDGEAERLLVLAATNLPQELDEAVLRRLSRRVYVPLPDPEARRALLSKLLDKH 429
G GKTMLAKAVA ES FFNISA+SLT K GEGEK+VRALFSVAR RQP++IFIDE+DS+L R EGEH+ASRRLKTEFL++ DGV SG + ++LV+ ATN PQELDEAVLRR ++RVYV LP E R LL LL+KH
Sbjct: 75 GNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARERQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGADD--QVLVMGATNRPQELDEAVLRRFAKRVYVALPAEETRFQLLKNLLEKH 215
BLAST of mRNA_F-distichus_contig96821.19133.1 vs. uniprot
Match: A0A6A4WYN7_AMPAM (Spastin n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WYN7_AMPAM) HSP 1 Score: 183 bits (464), Expect = 3.390e-55 Identity = 92/143 (64.34%), Postives = 117/143 (81.82%), Query Frame = 1
Query: 1 GTGKTMLAKAVATESGYAFFNISASSLTQKLFGEGEKMVRALFSVARSRQPAVIFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGVGSGDGEAERLLVLAATNLPQELDEAVLRRLSRRVYVPLPDPEARRALLSKLLDKH 429
G GKTMLA+A+A+E+ FF+ISASSLT K GEGEK+VRALF+VAR QP++IF+DE+DS+LS R EGEH+ASRRLKTEFL Q DG+G+ +++LVL ATN PQELD+A+LRR +R+Y+PLPD EAR+ALL +LL H
Sbjct: 41 GNGKTMLARALASEASVTFFSISASSLTSKWHGEGEKLVRALFAVARELQPSIIFMDELDSLLSERREGEHDASRRLKTEFLCQFDGLGTN--AEDKILVLGATNRPQELDQAILRRFPKRIYIPLPDREARKALLGRLLSSH 181
BLAST of mRNA_F-distichus_contig96821.19133.1 vs. uniprot
Match: UPI000EAADC95 (fidgetin-like protein 1 isoform X2 n=1 Tax=Microtus ochrogaster TaxID=79684 RepID=UPI000EAADC95) HSP 1 Score: 182 bits (461), Expect = 6.790e-55 Identity = 91/147 (61.90%), Postives = 119/147 (80.95%), Query Frame = 1
Query: 1 GTGKTMLAKAVATESGYAFFNISASSLTQKLFGEGEKMVRALFSVARSRQPAVIFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGVGSGDGEAERLLVLAATNLPQELDEAVLRRLSRRVYVPLPDPEARRALLSKLLDKHKASI 441
GTGKT++ K +A++SG FF+ISASSLT K GEGEKMVRALF+VAR +QPAVIFIDEIDS+LS RG+GEHE+SRR+KTEFLVQLDG + +R+LV+ ATN PQE+DEA RRL++R+Y+PLP+P AR+ ++ L+ K + +
Sbjct: 30 GTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIKTEFLVQLDGATTCS--EDRILVVGATNRPQEIDEAARRRLAKRLYIPLPEPSARKQIVVNLMSKEQCCL 174
BLAST of mRNA_F-distichus_contig96821.19133.1 vs. uniprot
Match: A0A8C2K0I4_CYPCA (Vesicle-fusing ATPase n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2K0I4_CYPCA) HSP 1 Score: 186 bits (473), Expect = 7.430e-55 Identity = 98/147 (66.67%), Postives = 117/147 (79.59%), Query Frame = 1
Query: 1 GTGKTMLAKAVATESGYAFFNISASSLTQKLFGEGEKMVRALFSVARSRQPAVIFIDEIDSVLSARGEGEHEASRRLKTEFLVQLDGVGSGDGEAERLLVLAATNLPQELDEAVLRRLSRRVYVPLPDPEARRALLSKLLDKHKASI 441
G GKTMLAKAVA ES FFNISA+SLT K GEGEK+VRALF+VAR QP++IFIDEIDS+L R EGEH+ASRRLKTEFL++ DGV SG G+ +R+LV+ ATN PQELDEAVLRR ++R+YV LP E R LL LL KH+ ++
Sbjct: 189 GNGKTMLAKAVAMESNATFFNISAASLTSKYMGEGEKLVRALFAVARELQPSIIFIDEIDSLLCERREGEHDASRRLKTEFLLEFDGVQSG-GDDDRVLVMGATNRPQELDEAVLRRFAKRIYVALPTEETRLKLLKNLLSKHRNTL 334 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96821.19133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig96821.19133.1 >prot_F-distichus_contig96821.19133.1 ID=prot_F-distichus_contig96821.19133.1|Name=mRNA_F-distichus_contig96821.19133.1|organism=Fucus distichus monoicous|type=polypeptide|length=142bp MLAKAVATESGYAFFNISASSLTQKLFGEGEKMVRALFSVARSRQPAVIFback to top mRNA from alignment at F-distichus_contig96821:258..2102- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig96821.19133.1 ID=mRNA_F-distichus_contig96821.19133.1|Name=mRNA_F-distichus_contig96821.19133.1|organism=Fucus distichus monoicous|type=mRNA|length=1845bp|location=Sequence derived from alignment at F-distichus_contig96821:258..2102- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig96821:258..2102- >mRNA_F-distichus_contig96821.19133.1 ID=mRNA_F-distichus_contig96821.19133.1|Name=mRNA_F-distichus_contig96821.19133.1|organism=Fucus distichus monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at F-distichus_contig96821:258..2102- (Fucus distichus monoicous)back to top |