mRNA_F-distichus_contig9651.19110.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig9651.19110.1
Unique NamemRNA_F-distichus_contig9651.19110.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9651.19110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9651contigF-distichus_contig9651:11199..11324 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size126
Cds size126
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931143.3571687-CDS-F-distichus_contig9651:11198..113241622931143.3571687-CDS-F-distichus_contig9651:11198..11324Fucus distichus monoicousCDSF-distichus_contig9651 11199..11324 +
1690886176.7429218-CDS-F-distichus_contig9651:11198..113241690886176.7429218-CDS-F-distichus_contig9651:11198..11324Fucus distichus monoicousCDSF-distichus_contig9651 11199..11324 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9651.19110.1prot_F-distichus_contig9651.19110.1Fucus distichus monoicouspolypeptideF-distichus_contig9651 11199..11324 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig9651.19110.1

>prot_F-distichus_contig9651.19110.1 ID=prot_F-distichus_contig9651.19110.1|Name=mRNA_F-distichus_contig9651.19110.1|organism=Fucus distichus monoicous|type=polypeptide|length=42bp
DAYPTTEPELRECSVCGRRFNPQALVKHLRTCQSVFHAKRKV
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mRNA from alignment at F-distichus_contig9651:11199..11324+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig9651.19110.1 ID=mRNA_F-distichus_contig9651.19110.1|Name=mRNA_F-distichus_contig9651.19110.1|organism=Fucus distichus monoicous|type=mRNA|length=126bp|location=Sequence derived from alignment at F-distichus_contig9651:11199..11324+ (Fucus distichus monoicous)
GACGCGTATCCGACGACTGAACCGGAGCTTCGCGAGTGTTCTGTCTGTGG
GAGGAGATTCAATCCTCAAGCGCTGGTGAAGCACTTGCGTACCTGTCAGT
CAGTCTTCCACGCCAAGCGTAAGGTG
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Coding sequence (CDS) from alignment at F-distichus_contig9651:11199..11324+

>mRNA_F-distichus_contig9651.19110.1 ID=mRNA_F-distichus_contig9651.19110.1|Name=mRNA_F-distichus_contig9651.19110.1|organism=Fucus distichus monoicous|type=CDS|length=252bp|location=Sequence derived from alignment at F-distichus_contig9651:11199..11324+ (Fucus distichus monoicous)
GACGCGTATCCGACGACTGAACCGGAGCTTCGCGAGTGTTCTGTCTGTGG
GAGGAGATTCAATCCTCAAGCGCTGGTGAAGCACTTGCGTACCTGTCAGT
CAGTCTTCCACGCCAAGCGTAAGGTGGACGCGTATCCGACGACTGAACCG
GAGCTTCGCGAGTGTTCTGTCTGTGGGAGGAGATTCAATCCTCAAGCGCT
GGTGAAGCACTTGCGTACCTGTCAGTCAGTCTTCCACGCCAAGCGTAAGG
TG
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