mRNA_F-distichus_contig95131.18973.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig95131.18973.1
Unique NamemRNA_F-distichus_contig95131.18973.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig95131.18973.1 vs. uniprot
Match: D7FYH7_ECTSI (Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH7_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 6.430e-30
Identity = 58/78 (74.36%), Postives = 67/78 (85.90%), Query Frame = 1
Query:    1 HLRLSPQTSDAYWNFSIDELARFDTPAMIEETLKASGQSKLCYIGFSQGSAQAFAAFSSNAELLDKICLFVALSPAAR 234
            HLR SP TSDAYW+FSIDELAR+DTP MI+  LK SGQ++LCYIGFSQG+AQAFAAFSS+ +L  K+ LFVALSPA R
Sbjct:  117 HLRRSPVTSDAYWDFSIDELARYDTPTMIDHVLKVSGQTQLCYIGFSQGTAQAFAAFSSDPDLQAKVFLFVALSPAVR 194          
BLAST of mRNA_F-distichus_contig95131.18973.1 vs. uniprot
Match: A0A4D9CWT9_9STRA (AB hydrolase-1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWT9_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 3.270e-22
Identity = 48/78 (61.54%), Postives = 62/78 (79.49%), Query Frame = 1
Query:    1 HLRLSPQTSDAYWNFSIDELARFDTPAMIEETLKASGQSKLCYIGFSQGSAQAFAAFSSNAELLDKICLFVALSPAAR 234
            H+ LSP + DAYWNFSIDELARFD PAM++  L+A+GQ KL Y+GFSQGSAQAFAAF+++  +  K+ LF+AL+   R
Sbjct:  267 HVSLSP-SQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSLFLALAAPPR 343          
BLAST of mRNA_F-distichus_contig95131.18973.1 vs. uniprot
Match: W7TN68_9STRA (Sterol esterase tgl1 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN68_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.920e-22
Identity = 47/78 (60.26%), Postives = 62/78 (79.49%), Query Frame = 1
Query:    1 HLRLSPQTSDAYWNFSIDELARFDTPAMIEETLKASGQSKLCYIGFSQGSAQAFAAFSSNAELLDKICLFVALSPAAR 234
            H+ LSP + DAYWNFSIDELARFD PAM++  L+A+GQ KL Y+GFSQGSAQAFAAF+++  +  K+ +F+AL+   R
Sbjct:  301 HVSLSP-SQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPR 377          
BLAST of mRNA_F-distichus_contig95131.18973.1 vs. uniprot
Match: A0A836CJG0_9STRA (Lipase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJG0_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.920e-18
Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = 1
Query:    1 HLRLSPQTSDAYWNFSIDELARFDTPAMIEETLKASGQSKLCYIGFSQGSAQAFAAFSSNAELLDKICLFVALSPAAR 234
            HL  SP   +AYWNFSIDELAR+D PA++   L  +   +L Y+GFSQGSAQ FAA S++  L  ++ LF ALSPAAR
Sbjct:   91 HLSWSPH-DEAYWNFSIDELARYDVPALVGAVLGVTRAPRLAYVGFSQGSAQMFAALSADTALQARVALFAALSPAAR 167          
BLAST of mRNA_F-distichus_contig95131.18973.1 vs. uniprot
Match: A0A4P9Y7M6_9FUNG (Sterol esterase-like protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y7M6_9FUNG)

HSP 1 Score: 82.8 bits (203), Expect = 9.040e-17
Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = 1
Query:    1 HLRLSPQTSDAYWNFSIDELARFDTPAMIEETLKASGQSKLCYIGFSQGSAQAFAAFSSNAELLDKICLFVALSPAAR 234
            HL   P  S  +W+FSIDELAR+D P  I+  L+ +GQS L YIGFSQG+AQ FAA S N EL DK+  F+AL+PA +
Sbjct:  178 HLTEKPN-SRKFWDFSIDELARYDIPNTIDYVLRMTGQSTLSYIGFSQGTAQMFAALSINPELNDKVNSFIALAPATK 254          
BLAST of mRNA_F-distichus_contig95131.18973.1 vs. uniprot
Match: A0A4P9ZWC4_9FUNG (Alpha/Beta hydrolase protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZWC4_9FUNG)

HSP 1 Score: 82.4 bits (202), Expect = 1.280e-16
Identity = 41/65 (63.08%), Postives = 50/65 (76.92%), Query Frame = 1
Query:   34 YWNFSIDELARFDTPAMIEETLKASGQSKLCYIGFSQGSAQAFAAFSSNAELLDKICLFVALSPA 228
            +W+F+ID+LA FD P  I+  L  +G SKL YIGFSQG+AQ F A SSNAEL DK+ LFVAL+PA
Sbjct:  183 FWDFAIDDLAMFDVPNTIDYILATTGVSKLAYIGFSQGTAQMFCALSSNAELNDKVSLFVALAPA 247          
BLAST of mRNA_F-distichus_contig95131.18973.1 vs. uniprot
Match: A5DV46_LODEL (AB hydrolase-1 domain-containing protein n=1 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5DV46_LODEL)

HSP 1 Score: 82.0 bits (201), Expect = 1.800e-16
Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1
Query:   34 YWNFSIDELARFDTPAMIEETLKASGQSKLCYIGFSQGSAQAFAAFSSNAELLDKICLFVALSPA 228
            YWNFSIDE A FD P  I+  LKA+ + KL YIGFSQGSAQAFA+ S NAEL DKI   +A+SPA
Sbjct:  206 YWNFSIDEFALFDIPDTIDYILKATKKQKLTYIGFSQGSAQAFASISVNAELNDKIDQMIAISPA 270          
BLAST of mRNA_F-distichus_contig95131.18973.1 vs. uniprot
Match: UPI0014556637 (gastric triacylglycerol lipase-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014556637)

HSP 1 Score: 81.6 bits (200), Expect = 2.270e-16
Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 1
Query:    1 HLRLSPQTSDAYWNFSIDELARFDTPAMIEETLKASGQSKLCYIGFSQGSAQAFAAFSSNAELLDKICLFVALSP 225
            H  LSP+ S+ +W+FS DE+A FD PAM++  L  SGQ +L Y+G SQGSA AFA  S+N EL +KI +F AL P
Sbjct:  146 HTHLSPE-SEEFWDFSWDEMAAFDLPAMVDHALAVSGQEQLYYVGHSQGSAMAFAELSTNKELSEKIKMFFALGP 219          
BLAST of mRNA_F-distichus_contig95131.18973.1 vs. uniprot
Match: A0A8B8AR06_CRAVI (gastric triacylglycerol lipase-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8AR06_CRAVI)

HSP 1 Score: 81.6 bits (200), Expect = 2.460e-16
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = 1
Query:    1 HLRLSPQTSDAYWNFSIDELARFDTPAMIEETLKASGQSKLCYIGFSQGSAQAFAAFSSNAELLDKICLFVALSPAA 231
            H+RLSP+  DA+W +S DE+A++D PA+IE  LK SG+ +L +IG SQG+ QAFAAFS NA L  K+  F A+ P A
Sbjct:  305 HVRLSPK-EDAFWEWSWDEMAKYDIPAVIEYVLKKSGKQQLYFIGHSQGTLQAFAAFSQNATLSKKVKQFFAMGPVA 380          
BLAST of mRNA_F-distichus_contig95131.18973.1 vs. uniprot
Match: C5E2G8_LACTC (KLTH0H04840p n=2 Tax=Lachancea TaxID=300275 RepID=C5E2G8_LACTC)

HSP 1 Score: 80.9 bits (198), Expect = 4.110e-16
Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = 1
Query:    1 HLRLSPQTSDAYWNFSIDELARFDTPAMIEETLKASGQSKLCYIGFSQGSAQAFAAFSSNAELLDKICLFVALSPA 228
            H+ LS +++  +W+FS+DE A FD P  I   L  +G  KL YIGFSQGS+QAFAAFS N +L DKI LFV LSPA
Sbjct:  156 HINLSSRSAK-FWDFSLDEYAIFDIPNTISYILNLTGLEKLTYIGFSQGSSQAFAAFSINPQLRDKIQLFVGLSPA 230          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig95131.18973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYH7_ECTSI6.430e-3074.36Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
A0A4D9CWT9_9STRA3.270e-2261.54AB hydrolase-1 domain-containing protein n=2 Tax=M... [more]
W7TN68_9STRA3.920e-2260.26Sterol esterase tgl1 (Fragment) n=1 Tax=Nannochlor... [more]
A0A836CJG0_9STRA3.920e-1856.41Lipase n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A4P9Y7M6_9FUNG9.040e-1756.41Sterol esterase-like protein n=1 Tax=Piptocephalis... [more]
A0A4P9ZWC4_9FUNG1.280e-1663.08Alpha/Beta hydrolase protein n=1 Tax=Dimargaris cr... [more]
A5DV46_LODEL1.800e-1666.15AB hydrolase-1 domain-containing protein n=1 Tax=L... [more]
UPI00145566372.270e-1654.67gastric triacylglycerol lipase-like n=1 Tax=Asteri... [more]
A0A8B8AR06_CRAVI2.460e-1654.55gastric triacylglycerol lipase-like n=1 Tax=Crasso... [more]
C5E2G8_LACTC4.110e-1657.89KLTH0H04840p n=2 Tax=Lachancea TaxID=300275 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig95131contigF-distichus_contig95131:100..1360 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score119.8
Seed ortholog evalue5.7e-25
Seed eggNOG ortholog2880.D7FYH7
Preferred nameTGL1
KEGG rclassRC00055,RC00523
KEGG koko:K01052
KEGG ReactionR01462
KEGG Pathwayko00100,ko04142,ko04979,map00100,map04142,map04979
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004771,GO:0005575,GO:0005622,GO:0005623,GO:0005811,GO:0006066,GO:0006629,GO:0006694,GO:0006696,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008610,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016298,GO:0016787,GO:0016788,GO:0031224,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044425,GO:0044464,GO:0046165,GO:0052689,GO:0071704,GO:0097384,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653
EggNOG free text desc.hydrolase activity, acting on ester bonds
EggNOG OGsCOG0596@1,KOG2624@2759
EC3.1.1.13
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size234
Cds size234
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931128.3413532-CDS-F-distichus_contig95131:99..2091622931128.3413532-CDS-F-distichus_contig95131:99..209Fucus distichus monoicousCDSF-distichus_contig95131 100..209 +
1690886170.1933079-CDS-F-distichus_contig95131:99..2091690886170.1933079-CDS-F-distichus_contig95131:99..209Fucus distichus monoicousCDSF-distichus_contig95131 100..209 +
1622931128.3573148-CDS-F-distichus_contig95131:1236..13601622931128.3573148-CDS-F-distichus_contig95131:1236..1360Fucus distichus monoicousCDSF-distichus_contig95131 1237..1360 +
1690886170.210874-CDS-F-distichus_contig95131:1236..13601690886170.210874-CDS-F-distichus_contig95131:1236..1360Fucus distichus monoicousCDSF-distichus_contig95131 1237..1360 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig95131.18973.1prot_F-distichus_contig95131.18973.1Fucus distichus monoicouspolypeptideF-distichus_contig95131 100..1360 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig95131.18973.1

>prot_F-distichus_contig95131.18973.1 ID=prot_F-distichus_contig95131.18973.1|Name=mRNA_F-distichus_contig95131.18973.1|organism=Fucus distichus monoicous|type=polypeptide|length=78bp
HLRLSPQTSDAYWNFSIDELARFDTPAMIEETLKASGQSKLCYIGFSQGS
AQAFAAFSSNAELLDKICLFVALSPAAR
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mRNA from alignment at F-distichus_contig95131:100..1360+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig95131.18973.1 ID=mRNA_F-distichus_contig95131.18973.1|Name=mRNA_F-distichus_contig95131.18973.1|organism=Fucus distichus monoicous|type=mRNA|length=1261bp|location=Sequence derived from alignment at F-distichus_contig95131:100..1360+ (Fucus distichus monoicous)
CACCTGCGATTGTCGCCCCAGACATCAGACGCGTACTGGAACTTCAGCAT CGACGAGCTGGCCCGCTTCGACACGCCTGCCATGATCGAAGAAACCCTCA AGGCCTCGGGGTAAGCGAGGTTATTGCCCCTATCCGCGGAGAAGTGTTTT ATCGGTACTTTTGAGGGTCAGAAACACCAACCGTTGACGACACGCAACCG GCGAGATGTTCACTAAACGCCCTAATTCCGTATGAAAATAGAAAATGGAA GCCATGGAAAAGTATTGACCGAGTCGAGCAACCTCCGTTTGAAACCACAA GTTTTATAGAAGTTGCGGACATCCTCATCGCTTAACCGTGAACCTATTTC CGATTTCCAGACCCATATGAAACGGGACTAGATTCAGCGATGCAATCGGC TGGCTAACCTGAGAATCGGCCCACTTTCAGTTTCCCAAGTCTACGGTTTC CGGCCTCCTTAAAAAGTCACCAAAAGAAAGAAAAACAAACAAACTTTTGA GGCGTTTTTTTATTTTTATTTTTCAAAACACAATAAAACTTGCACGGTGG CGATTGAGAACGTCATTGCTCTCGCCTGTTCTCCCTCCTATGAATTCAAG TTACGGTAGACGGGCCAGTAGATGAGGGTAGGAAGACAACGCACTCTCTT TCAACCAAGCGGACAATCGCGTCAGAGGTGTTTCGCTTTCGTGGAGATAC CTACACAATCGAAGTTCAAAGGTTTTTCTTGTACGGAGTATGCCATTTTC GCATGCCGCCATCGAGAAACTCGCCGAAAACACACACACACACACACACA CACGAAGGGAAACCGGCCGCCAGCCCCCCCGAGGCGTGTCTCGAGCCCTC CTTTCCCGCGGCAAAGACGTGGTCTCTGGAATAGGAGGCTCTGCCGTTGC GTCATGTGAAAACGTCAGTTGTTTACTGTCGCTGTCATCGAGCGCTTACC ACGGTGGTACAAACCCACGCTTGTTTGTGGAAACACTCCCCACGATACGC GGTCAAGCCTATATTGTGCCTTTTTCTTGTGTATGTCCCGGCGACTTTTG ACCGTTTCTGGAAGAAGCTAAAGCGAAAATATCTCTTCTCTCCCCGTCTC CTCCCTGGCCCCAAATGGAAAATACCGCTGCACATAGGCAGAGCAAGCTT TGCTACATCGGGTTTTCCCAGGGATCAGCGCAGGCGTTTGCCGCGTTCTC GAGCAACGCTGAGCTCCTGGACAAGATCTGCCTCTTCGTCGCGCTGTCGC CCGCGGCGCGA
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Coding sequence (CDS) from alignment at F-distichus_contig95131:100..1360+

>mRNA_F-distichus_contig95131.18973.1 ID=mRNA_F-distichus_contig95131.18973.1|Name=mRNA_F-distichus_contig95131.18973.1|organism=Fucus distichus monoicous|type=CDS|length=468bp|location=Sequence derived from alignment at F-distichus_contig95131:100..1360+ (Fucus distichus monoicous)
CACCTGCGATTGTCGCCCCAGACATCAGACGCGTACTGGAACTTCAGCAT
CGACGAGCTGGCCCGCTTCGACACGCCTGCCATGATCGAAGAAACCCTCA
AGGCCTCGGGCACCTGCGATTGTCGCCCCAGACATCAGACGCGTACTGGA
ACTTCAGCATCGACGAGCTGGCCCGCTTCGACACGCCTGCCATGATCGAA
GAAACCCTCAAGGCCTCGGGGCAGAGCAAGCTTTGCTACATCGGGTTTTC
CCAGGGATCAGCGCAGGCGTTTGCCGCGTTCTCGAGCAACGCTGAGCTCC
TGGACAAGATCTGCCTCTTCGTCGCGCTGTCGCCCGCGGCGCGAGCAGAG
CAAGCTTTGCTACATCGGGTTTTCCCAGGGATCAGCGCAGGCGTTTGCCG
CGTTCTCGAGCAACGCTGAGCTCCTGGACAAGATCTGCCTCTTCGTCGCG
CTGTCGCCCGCGGCGCGA
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