mRNA_F-distichus_contig9500.18956.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig9500.18956.1 vs. uniprot
Match: D7FWG4_ECTSI (Aminoacyl-tRNA hydrolase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG4_ECTSI) HSP 1 Score: 243 bits (619), Expect = 7.090e-78 Identity = 118/150 (78.67%), Postives = 131/150 (87.33%), Query Frame = 1
Query: 1 EGFEEEERALQTGDGARSWSSDTGPFKLVLVVNMELKMGKGKARICRSSPLGIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 450
E FEEEERALQ+ GAR+WS D GPFKLVL+VNM+LKMGKGK +VAQCCHATLGNYR+ ER+CPSAL+GWE+MGQAKICVKCPT EL+DIQAKAQ+AG++NYLVMDAGHTQIA GSRTVLALGPAPVWAFEGISSHLKLM
Sbjct: 23 EEFEEEERALQSNGGARAWSLDDGPFKLVLIVNMQLKMGKGK----------VVAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQSAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
BLAST of mRNA_F-distichus_contig9500.18956.1 vs. uniprot
Match: A0A836C8I9_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I9_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.520e-46 Identity = 80/137 (58.39%), Postives = 97/137 (70.80%), Query Frame = 1
Query: 40 DGARSWSSDTGPFKLVLVVNMELKMGKGKARICRSSPLGIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 450
D R W+ D GPFKLVLVVN ELKMGKGK + AQCCHATLG Y+ R+ P+ +K WE + QAKICVKCP +E++ I+ KA+AAG++ Y+V DAG TQI GSRTVL +GPAP AF GI+ HLKLM
Sbjct: 74 DQIRDWTIDDGPFKLVLVVNSELKMGKGK----------VAAQCCHATLGCYKTARRHAPNCVKSWEYLAQAKICVKCPEESEMWQIREKAEAAGLVTYMVADAGRTQIPSGSRTVLGIGPAPETAFLGITDHLKLM 200
BLAST of mRNA_F-distichus_contig9500.18956.1 vs. uniprot
Match: A0A7S3MCE7_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCE7_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.440e-43 Identity = 77/141 (54.61%), Postives = 100/141 (70.92%), Query Frame = 1
Query: 40 DGA----RSWSSDTGPFKLVLVVNMELKMGKGKARICRSSPLGIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 450
DGA S++ + GPFKL+L VN L MGKGK + AQCCHATLG Y++ +YC +A++ WE+ GQAK+ VK T AE+ D+QAKA AAG++ Y V D G TQIA GSRTVLA+GPAP +AF+G++SHLKL+
Sbjct: 57 DGAYDILNSYTEEDGPFKLILCVNNSLSMGKGK----------VAAQCCHATLGAYKIAIKYCQTAVENWEDDGQAKVAVKVDTEAEMADLQAKAMAAGLVTYFVQDEGRTQIAAGSRTVLAIGPAPAYAFQGLTSHLKLL 187
BLAST of mRNA_F-distichus_contig9500.18956.1 vs. uniprot
Match: A0A7S0XWF5_HEMAN (Aminoacyl-tRNA hydrolase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XWF5_HEMAN) HSP 1 Score: 142 bits (359), Expect = 4.550e-39 Identity = 75/133 (56.39%), Postives = 90/133 (67.67%), Query Frame = 1
Query: 52 SWSSDTGPFKLVLVVNMELKMGKGKARICRSSPLGIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 450
SWS GP K+VLVVN ELKMGKGK I AQC HATLG Y+ P L+ WE +GQAKICV+CPT AE+ ++ KA+A G+I Y V DAG TQI GSRTVLA+GPAP AF+G++ H KL+
Sbjct: 12 SWSVVDGPGKMVLVVNQELKMGKGK----------IAAQCGHATLGAYKKAS---PQVLRMWEGLGQAKICVQCPTEAEMHEVADKARAKGLITYQVTDAGRTQIPAGSRTVLAIGPAPESAFKGVTDHFKLL 131
BLAST of mRNA_F-distichus_contig9500.18956.1 vs. uniprot
Match: L1JZ89_GUITC (Aminoacyl-tRNA hydrolase (Fragment) n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JZ89_GUITC) HSP 1 Score: 141 bits (356), Expect = 7.160e-39 Identity = 73/122 (59.84%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 85 VLVVNMELKMGKGKARICRSSPLGIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 450
VLVVN ELKMGKGK I AQC HA LG Y+ ++Y PSAL WE GQAKICV+CPT E+++I KA A G+I Y+VMDAG TQIA GSRTVLA+GPAP F+G++ HLKL+
Sbjct: 1 VLVVNQELKMGKGK----------IAAQCGHAVLGAYKRGKKYAPSALTWWEKFGQAKICVQCPTEDEMWEIAKKAGAKGLITYIVMDAGRTQIAAGSRTVLAIGPAPEQQFKGLTDHLKLL 112
BLAST of mRNA_F-distichus_contig9500.18956.1 vs. uniprot
Match: A0A7S4K0G8_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K0G8_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.200e-38 Identity = 74/135 (54.81%), Postives = 86/135 (63.70%), Query Frame = 1
Query: 46 ARSWSSDTGPFKLVLVVNMELKMGKGKARICRSSPLGIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 450
AR W + P+K+VL VN +LKMGKGK I AQCCHA +G Y+ + CP ++ WE G AKI VKCP E+ I A GI YLV DAG TQIA GSRTVL LGPAPV AFEG++SHLKLM
Sbjct: 71 ARLWGMNNAPYKMVLCVNQDLKMGKGK----------IAAQCCHAAVGCYKRARKVCPDGVRAWEQTGCAKIAVKCPNQDEIEVILVAAHKRGIPLYLVADAGRTQIAAGSRTVLGLGPAPVSAFEGVTSHLKLM 195
BLAST of mRNA_F-distichus_contig9500.18956.1 vs. uniprot
Match: A0A7S2MVX1_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MVX1_9STRA) HSP 1 Score: 140 bits (353), Expect = 4.150e-37 Identity = 79/150 (52.67%), Postives = 89/150 (59.33%), Query Frame = 1
Query: 13 EEERALQTGDGA----RSWSSDTGPFKLVLVVNMELKMGKGKARICRSSPLGIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 450
E + + G GA + W GP+K+VL VN EL MGKGK I AQCCHA +G Y+ + CP+ LK WE G AKI +KCP EL I KA GI YLV DAG TQI GSRTVL LGPAPV FEGIS HLKLM
Sbjct: 75 ESDDEYEVGGGANVSSKEWGMMHGPYKMVLCVNQELGMGKGK----------IAAQCCHAAVGCYKRSLKQCPNGLKAWERTGCAKIALKCPNEQELTSILEKAYNKGIPCYLVEDAGRTQIKAGSRTVLGLGPAPVDVFEGISDHLKLM 214
BLAST of mRNA_F-distichus_contig9500.18956.1 vs. uniprot
Match: A0A7S2YD90_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YD90_9STRA) HSP 1 Score: 137 bits (344), Expect = 3.980e-36 Identity = 74/135 (54.81%), Postives = 85/135 (62.96%), Query Frame = 1
Query: 46 ARSWSSDTGPFKLVLVVNMELKMGKGKARICRSSPLGIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 450
A W P+K+VL VN L MGKGK I AQCCHA +G Y+ + P+A+K WE G AKI VKCP+ E+ I AKA + GI YLV DAG TQIA GSRTVL LGPAPV FEG+S HLKLM
Sbjct: 61 ASKWGMFNSPYKMVLCVNTSLSMGKGK----------IAAQCCHAAVGCYKRANKTIPNAVKAWECTGCAKIAVKCPSEEEMDLICAKAMSKGIPVYLVEDAGRTQIAAGSRTVLGLGPAPVSVFEGVSDHLKLM 185
BLAST of mRNA_F-distichus_contig9500.18956.1 vs. uniprot
Match: A0A7S4VM04_9STRA (Aminoacyl-tRNA hydrolase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VM04_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.590e-35 Identity = 74/135 (54.81%), Postives = 84/135 (62.22%), Query Frame = 1
Query: 46 ARSWSSDTGPFKLVLVVNMELKMGKGKARICRSSPLGIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 450
A W P+K+VL VN ELKMG GK +AQC HA +G Y+ + CP+ALK WE G AKI VKCP EL I KA + GI YLV DAG TQIA GSRTVL LGPAPV FEG++ HLKLM
Sbjct: 137 ASQWGIMHAPYKMVLCVNQELKMGPGKK----------MAQCSHAAVGCYKRSLKQCPAALKAWERTGCAKIAVKCPNETELISILEKAHSKGIPCYLVEDAGRTQIAAGSRTVLGLGPAPVDVFEGVTDHLKLM 261
BLAST of mRNA_F-distichus_contig9500.18956.1 vs. uniprot
Match: K0SKQ3_THAOC (Aminoacyl-tRNA hydrolase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SKQ3_THAOC) HSP 1 Score: 135 bits (340), Expect = 1.610e-35 Identity = 71/133 (53.38%), Postives = 86/133 (64.66%), Query Frame = 1
Query: 52 SWSSDTGPFKLVLVVNMELKMGKGKARICRSSPLGIVAQCCHATLGNYRLCERYCPSALKGWENMGQAKICVKCPTAAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTVLALGPAPVWAFEGISSHLKLM 450
+W P+K+VL VN L MGKGK I AQC HA +G Y+ +R+C + L WE G AKI VKCP+ E+ +I AKA + GI YLV DAG TQIA GSRTVL LGPAPV F+G+S+HLKLM
Sbjct: 64 AWGISDAPYKMVLCVNTSLSMGKGK----------IAAQCGHAAVGCYKRAKRHCQAGLSAWERTGCAKIAVKCPSEDEMDEIAAKALSRGIPIYLVEDAGRTQIAAGSRTVLGLGPAPVREFDGVSNHLKLM 186 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9500.18956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig9500.18956.1 >prot_F-distichus_contig9500.18956.1 ID=prot_F-distichus_contig9500.18956.1|Name=mRNA_F-distichus_contig9500.18956.1|organism=Fucus distichus monoicous|type=polypeptide|length=118bp MELKMGKGKARICRSSPLGIVAQCCHATLGNYRLCERYCPSALKGWENMGback to top mRNA from alignment at F-distichus_contig9500:3617..5488- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig9500.18956.1 ID=mRNA_F-distichus_contig9500.18956.1|Name=mRNA_F-distichus_contig9500.18956.1|organism=Fucus distichus monoicous|type=mRNA|length=1872bp|location=Sequence derived from alignment at F-distichus_contig9500:3617..5488- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig9500:3617..5488- >mRNA_F-distichus_contig9500.18956.1 ID=mRNA_F-distichus_contig9500.18956.1|Name=mRNA_F-distichus_contig9500.18956.1|organism=Fucus distichus monoicous|type=CDS|length=708bp|location=Sequence derived from alignment at F-distichus_contig9500:3617..5488- (Fucus distichus monoicous)back to top |