mRNA_F-distichus_contig10780.666.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 247 bits (631), Expect = 1.070e-69 Identity = 130/225 (57.78%), Postives = 161/225 (71.56%), Query Frame = 2
Query: 5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILEFNDATGTAWSSNTFEDADDDLCYKNFEDSS-FTSTDTLPPLC 676
DNHQYGFDPHDDSDYL IA N+VYNN NHGIIASKRCN++KIY NEVY+GG AAGIFLHRS D EVY N + +M DAGIA+LE+ DIHDN ++GIR+ LG +NN V+DNVF G++TY GSDEP V GRP +N FY+NTI T+TGVKIKE DN IT+N F+GT+ +EFN+A WS N+ + C ++ +++S FT + LP C
Sbjct: 227 DNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPT---NTCLEDIDNNSTFTGSSGLPLEC 447
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 247 bits (630), Expect = 1.260e-67 Identity = 125/200 (62.50%), Postives = 156/200 (78.00%), Query Frame = 2
Query: 2 RDNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDV-SSDGRPSENRFYDNTISNT--KTGVKIKEGDNTIITDNTFTGTSILEFNDATGTAWSSNT 592
RDN QYGFDPHDDSD LTI+NN VY N NHGIIASKRCN++KI+ NEVY+GGE A GIFLHRSSD EV+DNVVY+M+DAG+A++ES+DA+I+DN+FT+ +YGIR+SLG N + +N+F ++YGLYTY GSD+PDV +S+GRPS+N F NTI GV IKEGD+ + DN FTG S EF D++ T W NT
Sbjct: 414 RDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 241 bits (616), Expect = 9.840e-67 Identity = 129/209 (61.72%), Postives = 156/209 (74.64%), Query Frame = 2
Query: 5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEP-DVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILEFNDATGTAWSSNTFEDADDDLCYKN 628
DNHQYGFDPHDDSDYLT IIASKRCN+++IY NEVY+GG AAGIFLHRSSD V+DNVV+DM+DAG+A+LES +ADI++N F+ VK+GIR+SLG + N+V++N+F++ S GLYTYQGSDEP D SDGRPS+N F +N I N GVKIKEGD+T+ITDN FTGTS LEF DA T W NT +C KN
Sbjct: 304 DNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKN 497
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 240 bits (613), Expect = 1.700e-63 Identity = 129/224 (57.59%), Postives = 152/224 (67.86%), Query Frame = 2
Query: 5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILEFNDATGTAWSSNTFEDADDDLCYKNFEDSSFTSTDTLPPLC 676
DN QYGFDPHDDSDYLTIA NEVYNN NHGIIASKRCN++KI+ NEV +GG AAGIFLHRSSD V+DN + +M+DAGIA+LESFDA I+ N KYGIR+SLG NN VY N F + S+YGLYTY+GSDEPDVS DGRPS N N + + GVKIKEGD+ NTF EF ++T T WS N D C + ++ S P+C
Sbjct: 667 DNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG----CIEEDDEFDAASGSDSIPIC 885
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 228 bits (582), Expect = 1.380e-62 Identity = 122/229 (53.28%), Postives = 156/229 (68.12%), Query Frame = 2
Query: 5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILEFNDATGTAWSSNTFEDADDDLCYKNFED--------SSFTSTDTLP 667
DNHQY +ANN+VYNN NHGIIASKRCN++KIY N+V +GG A GIFLHRSSD+ EVY N +++M DAGIA+LESF+ADIHDN V++GIR+SLG N+VYDN F++CS +GLYTY GSDEPDVS+ GRP+ N F +N ++N+ GVK K DN ++T+N FTGT LEF DA T WS N+ +C N S+F+S+ +P
Sbjct: 249 DNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSG---VCIDNITSDDGNSVPPSTFSSSSGVP 461
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 229 bits (585), Expect = 6.000e-60 Identity = 127/230 (55.22%), Postives = 158/230 (68.70%), Query Frame = 2
Query: 5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSD--GRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILE---FNDATGTAWSSNTFEDADDDLCYKNFEDSSFT-STDTLPPLC 676
DN QYGFDPHDDSD L IA N V+ N NHGIIASKRCN++KI+ N VY+GGE A GIFLHRSSD CEV+ N VYDMKDAG+AI+ES A IHDNTFT+VKYGIR+S+G A N V +N F EC +YG+YTYQG+D+P+ S D G +N F+ NT+ GVKI++ + + TDN F S E F D W++N D D+C K ++ + S D+LP LC
Sbjct: 622 DNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLKGDKNIDYMKSYDSLPDLC 845
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI) HSP 1 Score: 226 bits (575), Expect = 2.460e-58 Identity = 124/230 (53.91%), Postives = 157/230 (68.26%), Query Frame = 2
Query: 5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSD--GRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILE---FNDATGTAWSSNTFEDADDDLCYKNFEDSS-FTSTDTLPPLC 676
DN QYGFDPHDDSD L IA N V+ N NHGIIASKRCN++KI+ N VY+GGE A GIFLHRSSD CEV++N VYDM+DAG+AI+ES A I+DNTFT+VKYGIR+S+G + N V +N F EC +YG+YTYQG+DEP+ S D G +N F+ NT+ GVKI++ + TDN F S E F D W++N D +C K +++ F S D+LP C
Sbjct: 683 DNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNLVPDG---ICLKGDDNTDYFKSYDSLPDTC 906
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 205 bits (522), Expect = 8.240e-54 Identity = 116/225 (51.56%), Postives = 143/225 (63.56%), Query Frame = 2
Query: 5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTF-TGTS---ILEFNDATGTAWSSNTFEDADD-------DLCYKNFEDSSF 646
DN YGFDPHDDSD+LTI +NEVYNN HGIIASKRCN + I GNEVY G E +AGIFLHRSSD V N V+D DAG+A+LESF+AD+ +NTF + KYG+R+S+G A+N +N+ SKY YTY GSDEPDV S GR N F N+ S + +KIKE D T DN F G + ++ F+DA + NT D D D C+ DS +
Sbjct: 284 DNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGY 508
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 198 bits (503), Expect = 2.930e-51 Identity = 112/225 (49.78%), Postives = 142/225 (63.11%), Query Frame = 2
Query: 5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTF-TGTS---ILEFNDATGTAWSSNTFED-------ADDDLCYKNFEDSSF 646
DN YGFDPHDDSD+LTI +NEVYNN HGIIASKRCN + I GNEVY G E +AGIFLHRSSD V N V+D DAG+A+LESF+AD+ +NTF + KYG+R S+G A+N +N ++Y Y+Y G+DEPDV S GR N F N+ S + +KIKE D T DN F G + ++ F++AT NT D D+D C+ DS +
Sbjct: 280 DNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGY 504
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: Q7XAK0_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK0_9PHAE) HSP 1 Score: 187 bits (475), Expect = 4.450e-50 Identity = 100/196 (51.02%), Postives = 126/196 (64.29%), Query Frame = 2
Query: 5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILEFNDATGTAWSSNT 592
DN YGFDPHDDSD+LT+ +NEVY+N HGIIASKRCN + I GNEVY G +AGIFL+RSSD V N V+D DAG+A++ESF+AD+ DN F + KYG+RIS+G N NV +KY Y+Y G+D PDV GR +N F +NTI +KI + D T N+F + F+DA T S NT
Sbjct: 44 DNKGYGFDPHDDSDFLTVHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGASSSAGIFLYRSSDDAVVKGNYVHDNGDAGLAMMESFNADVSDNIFENNKYGVRISVGCGRNIFSKNVISGSTKYNAYSYLGTDAPDVVKSGRSKDNCFQENTIVGGIETLKIMDADGTEFIGNSFEDAVTIRFDDAARTVMSGNT 239 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10780.666.1 >prot_F-distichus_contig10780.666.1 ID=prot_F-distichus_contig10780.666.1|Name=mRNA_F-distichus_contig10780.666.1|organism=Fucus distichus monoicous|type=polypeptide|length=150bp MKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYback to top mRNA from alignment at F-distichus_contig10780:3686..7271- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10780.666.1 ID=mRNA_F-distichus_contig10780.666.1|Name=mRNA_F-distichus_contig10780.666.1|organism=Fucus distichus monoicous|type=mRNA|length=3586bp|location=Sequence derived from alignment at F-distichus_contig10780:3686..7271- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10780:3686..7271- >mRNA_F-distichus_contig10780.666.1 ID=mRNA_F-distichus_contig10780.666.1|Name=mRNA_F-distichus_contig10780.666.1|organism=Fucus distichus monoicous|type=CDS|length=900bp|location=Sequence derived from alignment at F-distichus_contig10780:3686..7271- (Fucus distichus monoicous)back to top |