mRNA_F-distichus_contig10780.666.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10780.666.1
Unique NamemRNA_F-distichus_contig10780.666.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.070e-69
Identity = 130/225 (57.78%), Postives = 161/225 (71.56%), Query Frame = 2
Query:    5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILEFNDATGTAWSSNTFEDADDDLCYKNFEDSS-FTSTDTLPPLC 676
            DNHQYGFDPHDDSDYL IA N+VYNN NHGIIASKRCN++KIY NEVY+GG  AAGIFLHRS D  EVY N + +M DAGIA+LE+   DIHDN     ++GIR+ LG +NN V+DNVF      G++TY GSDEP V   GRP +N FY+NTI  T+TGVKIKE DN  IT+N F+GT+ +EFN+A    WS N+      + C ++ +++S FT +  LP  C
Sbjct:  227 DNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPT---NTCLEDIDNNSTFTGSSGLPLEC 447          
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 1.260e-67
Identity = 125/200 (62.50%), Postives = 156/200 (78.00%), Query Frame = 2
Query:    2 RDNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDV-SSDGRPSENRFYDNTISNT--KTGVKIKEGDNTIITDNTFTGTSILEFNDATGTAWSSNT 592
            RDN QYGFDPHDDSD LTI+NN VY N NHGIIASKRCN++KI+ NEVY+GGE A GIFLHRSSD  EV+DNVVY+M+DAG+A++ES+DA+I+DN+FT+ +YGIR+SLG   N + +N+F   ++YGLYTY GSD+PDV +S+GRPS+N F  NTI       GV IKEGD+ +  DN FTG S  EF D++ T W  NT
Sbjct:  414 RDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613          
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 9.840e-67
Identity = 129/209 (61.72%), Postives = 156/209 (74.64%), Query Frame = 2
Query:    5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEP-DVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILEFNDATGTAWSSNTFEDADDDLCYKN 628
            DNHQYGFDPHDDSDYLT             IIASKRCN+++IY NEVY+GG  AAGIFLHRSSD   V+DNVV+DM+DAG+A+LES +ADI++N F+ VK+GIR+SLG + N+V++N+F++ S  GLYTYQGSDEP D  SDGRPS+N F +N I N   GVKIKEGD+T+ITDN FTGTS LEF DA  T W  NT       +C KN
Sbjct:  304 DNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKN 497          
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 1.700e-63
Identity = 129/224 (57.59%), Postives = 152/224 (67.86%), Query Frame = 2
Query:    5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILEFNDATGTAWSSNTFEDADDDLCYKNFEDSSFTSTDTLPPLC 676
            DN QYGFDPHDDSDYLTIA NEVYNN NHGIIASKRCN++KI+ NEV +GG  AAGIFLHRSSD   V+DN + +M+DAGIA+LESFDA I+ N     KYGIR+SLG  NN VY N F + S+YGLYTY+GSDEPDVS DGRPS N    N + +   GVKIKEGD+     NTF      EF ++T T WS N   D     C +  ++    S     P+C
Sbjct:  667 DNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG----CIEEDDEFDAASGSDSIPIC 885          
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 1.380e-62
Identity = 122/229 (53.28%), Postives = 156/229 (68.12%), Query Frame = 2
Query:    5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILEFNDATGTAWSSNTFEDADDDLCYKNFED--------SSFTSTDTLP 667
            DNHQY            +ANN+VYNN NHGIIASKRCN++KIY N+V +GG  A GIFLHRSSD+ EVY N +++M DAGIA+LESF+ADIHDN    V++GIR+SLG   N+VYDN F++CS +GLYTY GSDEPDVS+ GRP+ N F +N ++N+  GVK K  DN ++T+N FTGT  LEF DA  T WS N+       +C  N           S+F+S+  +P
Sbjct:  249 DNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSG---VCIDNITSDDGNSVPPSTFSSSSGVP 461          
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 6.000e-60
Identity = 127/230 (55.22%), Postives = 158/230 (68.70%), Query Frame = 2
Query:    5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSD--GRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILE---FNDATGTAWSSNTFEDADDDLCYKNFEDSSFT-STDTLPPLC 676
            DN QYGFDPHDDSD L IA N V+ N NHGIIASKRCN++KI+ N VY+GGE A GIFLHRSSD CEV+ N VYDMKDAG+AI+ES  A IHDNTFT+VKYGIR+S+G A N V +N F EC +YG+YTYQG+D+P+ S D  G   +N F+ NT+     GVKI++ +  + TDN F   S  E   F D     W++N   D   D+C K  ++  +  S D+LP LC
Sbjct:  622 DNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLKGDKNIDYMKSYDSLPDLC 845          
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 2.460e-58
Identity = 124/230 (53.91%), Postives = 157/230 (68.26%), Query Frame = 2
Query:    5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSD--GRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILE---FNDATGTAWSSNTFEDADDDLCYKNFEDSS-FTSTDTLPPLC 676
            DN QYGFDPHDDSD L IA N V+ N NHGIIASKRCN++KI+ N VY+GGE A GIFLHRSSD CEV++N VYDM+DAG+AI+ES  A I+DNTFT+VKYGIR+S+G + N V +N F EC +YG+YTYQG+DEP+ S D  G   +N F+ NT+     GVKI++ +    TDN F   S  E   F D     W++N   D    +C K  +++  F S D+LP  C
Sbjct:  683 DNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNLVPDG---ICLKGDDNTDYFKSYDSLPDTC 906          
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 8.240e-54
Identity = 116/225 (51.56%), Postives = 143/225 (63.56%), Query Frame = 2
Query:    5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTF-TGTS---ILEFNDATGTAWSSNTFEDADD-------DLCYKNFEDSSF 646
            DN  YGFDPHDDSD+LTI +NEVYNN  HGIIASKRCN + I GNEVY G E +AGIFLHRSSD   V  N V+D  DAG+A+LESF+AD+ +NTF + KYG+R+S+G A+N   +N+    SKY  YTY GSDEPDV S GR   N F  N+ S  +  +KIKE D T   DN F  G +   ++ F+DA  +    NT  D  D       D C+    DS +
Sbjct:  284 DNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGY 508          
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 2.930e-51
Identity = 112/225 (49.78%), Postives = 142/225 (63.11%), Query Frame = 2
Query:    5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTF-TGTS---ILEFNDATGTAWSSNTFED-------ADDDLCYKNFEDSSF 646
            DN  YGFDPHDDSD+LTI +NEVYNN  HGIIASKRCN + I GNEVY G E +AGIFLHRSSD   V  N V+D  DAG+A+LESF+AD+ +NTF + KYG+R S+G A+N   +N     ++Y  Y+Y G+DEPDV S GR   N F  N+ S  +  +KIKE D T   DN F  G +   ++ F++AT      NT  D        D+D C+    DS +
Sbjct:  280 DNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGY 504          
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Match: Q7XAK0_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK0_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 4.450e-50
Identity = 100/196 (51.02%), Postives = 126/196 (64.29%), Query Frame = 2
Query:    5 DNHQYGFDPHDDSDYLTIANNEVYNNDNHGIIASKRCNSIKIYGNEVYNGGEQAAGIFLHRSSDSCEVYDNVVYDMKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKYGLYTYQGSDEPDVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNTFTGTSILEFNDATGTAWSSNT 592
            DN  YGFDPHDDSD+LT+ +NEVY+N  HGIIASKRCN + I GNEVY G   +AGIFL+RSSD   V  N V+D  DAG+A++ESF+AD+ DN F + KYG+RIS+G   N    NV    +KY  Y+Y G+D PDV   GR  +N F +NTI      +KI + D T    N+F     + F+DA  T  S NT
Sbjct:   44 DNKGYGFDPHDDSDFLTVHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGASSSAGIFLYRSSDDAVVKGNYVHDNGDAGLAMMESFNADVSDNIFENNKYGVRISVGCGRNIFSKNVISGSTKYNAYSYLGTDAPDVVKSGRSKDNCFQENTIVGGIETLKIMDADGTEFIGNSFEDAVTIRFDDAARTVMSGNT 239          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10780.666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR8_ECTSI1.070e-6957.78Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G8D9_ECTSI1.260e-6762.50Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LRM4_ECTSI9.840e-6761.72Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D8LC73_ECTSI1.700e-6357.59Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5JGU8_9PHAE1.380e-6253.28MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JNF5_9PHAE6.000e-6055.22MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LDB5_ECTSI2.460e-5853.91Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI8.240e-5451.56Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI2.930e-5149.78Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
Q7XAK0_9PHAE4.450e-5051.02Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10780contigF-distichus_contig10780:3686..7271 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score131.7
Seed ortholog evalue2.8e-28
Seed eggNOG ortholog2880.D8LC73
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons4
Model size2639
Cds size450
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10780.666.1prot_F-distichus_contig10780.666.1Fucus distichus monoicouspolypeptideF-distichus_contig10780 5646..6757 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929012.1261966-UTR-F-distichus_contig10780:3685..56451622929012.1261966-UTR-F-distichus_contig10780:3685..5645Fucus distichus monoicousUTRF-distichus_contig10780 3686..5645 -
1690885105.2129998-UTR-F-distichus_contig10780:3685..56451690885105.2129998-UTR-F-distichus_contig10780:3685..5645Fucus distichus monoicousUTRF-distichus_contig10780 3686..5645 -
1622929012.1909642-UTR-F-distichus_contig10780:6757..67741622929012.1909642-UTR-F-distichus_contig10780:6757..6774Fucus distichus monoicousUTRF-distichus_contig10780 6758..6774 -
1690885105.2679265-UTR-F-distichus_contig10780:6757..67741690885105.2679265-UTR-F-distichus_contig10780:6757..6774Fucus distichus monoicousUTRF-distichus_contig10780 6758..6774 -
1622929012.2052543-UTR-F-distichus_contig10780:7059..72711622929012.2052543-UTR-F-distichus_contig10780:7059..7271Fucus distichus monoicousUTRF-distichus_contig10780 7060..7271 -
1690885105.2754886-UTR-F-distichus_contig10780:7059..72711690885105.2754886-UTR-F-distichus_contig10780:7059..7271Fucus distichus monoicousUTRF-distichus_contig10780 7060..7271 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929012.1413426-CDS-F-distichus_contig10780:5645..58031622929012.1413426-CDS-F-distichus_contig10780:5645..5803Fucus distichus monoicousCDSF-distichus_contig10780 5646..5803 -
1690885105.2345147-CDS-F-distichus_contig10780:5645..58031690885105.2345147-CDS-F-distichus_contig10780:5645..5803Fucus distichus monoicousCDSF-distichus_contig10780 5646..5803 -
1622929012.157757-CDS-F-distichus_contig10780:6267..64111622929012.157757-CDS-F-distichus_contig10780:6267..6411Fucus distichus monoicousCDSF-distichus_contig10780 6268..6411 -
1690885105.244095-CDS-F-distichus_contig10780:6267..64111690885105.244095-CDS-F-distichus_contig10780:6267..6411Fucus distichus monoicousCDSF-distichus_contig10780 6268..6411 -
1622929012.1750846-CDS-F-distichus_contig10780:6609..67571622929012.1750846-CDS-F-distichus_contig10780:6609..6757Fucus distichus monoicousCDSF-distichus_contig10780 6610..6757 -
1690885105.254582-CDS-F-distichus_contig10780:6609..67571690885105.254582-CDS-F-distichus_contig10780:6609..6757Fucus distichus monoicousCDSF-distichus_contig10780 6610..6757 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10780.666.1

>prot_F-distichus_contig10780.666.1 ID=prot_F-distichus_contig10780.666.1|Name=mRNA_F-distichus_contig10780.666.1|organism=Fucus distichus monoicous|type=polypeptide|length=150bp
MKDAGIAILESFDADIHDNTFTDVKYGIRISLGGANNNVYDNVFDECSKY
GLYTYQGSDEPDVSSDGRPSENRFYDNTISNTKTGVKIKEGDNTIITDNT
FTGTSILEFNDATGTAWSSNTFEDADDDLCYKNFEDSSFTSTDTLPPLC*
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mRNA from alignment at F-distichus_contig10780:3686..7271-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10780.666.1 ID=mRNA_F-distichus_contig10780.666.1|Name=mRNA_F-distichus_contig10780.666.1|organism=Fucus distichus monoicous|type=mRNA|length=3586bp|location=Sequence derived from alignment at F-distichus_contig10780:3686..7271- (Fucus distichus monoicous)
GCGCGATAACCACCAGTACGGGTTCGACCCCCACGACGACTCGGATTACC TCACCATCGCCAACAACGAGGTCTACAACAACGATAATCATGGCATCATC GCCTCCAAGCGCTGCAACAGTATCAAGATCTACGGCAATGAGGTCTACAA CGGTGGTGAGCAAGCAGCGGGCATCTTTCTCCACCGTAGCTCCGACAGCT GCGAGGTATACGGTGAGTCAAGGGAGACATTTGCTTCGTCCGCTCGGTGG GTTCTCTCAAGAGGGACAAAACGTGTCGGCATGTGTACCGTACATGCAAG GAGTTATTTGTGGTTGAGCGATTGCCTCTGATCAACTTGTGAGCTGCTTT TATTTAAGGAAAATTCTGAACGCATCTAGTATTATTATTTTATTTATAAA TTTTGAACATGGGTGCTGGTTCACCGTGTTGCTGACATTTTCGACTGTAT TCCCTCTTTGTGTGGACTTGCCGAAAATTGCTGCTGTGCCGGCGAAGACA ATGTCGTTTATGACATGAAGGACGCCGGTATAGCCATTCTGGAGTCTTTT GACGCCGACATCCACGACAACACCTTCACGGACGTCAAGTACGGCATCCG TATCAGTCTGGGCGGAGCAAACAACAACGTGTACGACAACGTGTTTGACG AATGCTCAAAATGTGAGTCCCTGCCCATAGTTTGCTGTAAATGGGTCGAA GTTACTTTTTACTCTATAAGATTTCGCGGAGCAAAATCTGGGTAACCTGC AAAACCCTCTCCTCACCTCCTCTTCTTACTCGATGTTGTACGGGTTCGTA ACTGCCCATCTCCGCATTCCTGCCCTATTTTCATTTCTCGACGCACGACG CGGTTTGTAGATGGTTTGTACACCTACCAGGGTTCAGACGAGCCCGACGT TTCTTCCGACGGCCGGCCTAGCGAGAACCGCTTCTACGACAACACAATCT CCAACACCAAGACGGGTGTCAAGATCAAAGAAGGAGACAACACCATTATC ACTGGTAAGATGAAATCTAAATGTTATAGACAAGACAATCACGGCTACAT CATCTCTTCCCCCCCGTGTTGCTAGACAACCCCCCGCGCCGAATTCGCTT TGGAAATACACACAGGTCCCCACTGTCTATAAACATTTCCTGCTCAGCAA GAGGTCAAAGATCTTCCTGCATACCAGTACAGCGTACGCTGCTAACGGAT GGAAACAGGCCTCAGTAGAGCTCAAACTTAGTCTTGTTGCGGGTTATTTT CTGCGTGCCCCGGTTTAGACATAAGCCACATCGTGCAAATGGTGCCGAAC AGGCTGTTAAAATGATTCGTTTTTGTGGCAAATAGTTGAGCACGGGCGCC GTGGAACCAATGTGAGAACACATTCCCCTTGTAAGGAACATCATTTATCA CCCCTGCCAATGCCACTGGGCTCGGACATCGGGGTTGATTCCGCTCGCGA CTCTTTTTGCACATGCAGATAACACCTTCACGGGGACTTCTATTCTCGAA TTTAACGACGCTACGGGTACTGCGTGGTCGAGCAACACTTTCGAGGACGC TGACGACGATCTCTGCTACAAGAACTTTGAGGACAGCTCGTTCACGTCCA CCGATACTCTTCCCCCGCTGTGCTAAGCAGAGACCCGCGGGCATGGCCAG CTGTTACAGAAACCGACGAGGACATCTAGCTTAAGCAGTTGGTCAGGCCT CCACCCTTCGTGCGCTAAAAATGATTTGGGAAAGATTGGGCAATCTTTGT GCCAGTATTGCCGAGGCGTACAGACTTTAGGTATTACAAGGCAGAAGTCG ACCCTTGGGTTGGAATATTTTGGTCATATTTAACGTTTAACGTTGCGTTC GACCCGTGCCTATGCGGTAACGTTGCTCTTGCGCATAACAACGCAGCACA CGCTGACACGCTAGCACGAAGGGTATGGTGGAAGTCTTACGATTCAATTC GATGCCGCTGCCGCCAAGAGGTGGCTTGCATCACCCTGTACCTCTGAAAT TATGTATAACGTTGTCCTCTGTAATCTTGCATTCGTCTATATCTGGAGTA ACAAGCCCACACGTATGCATTATGTTTGACAGATTCTTCCCTTATTGAGG AATAGTGGGCAAGACGAGGTGGTACCGAGCGACCCCGCCCTTTGAAAGCG CGATGTACCTCCTTCCGAGAGAATTTGCTCGATGAGGATATTTGATATAG TGCTACTATATATTTGTCTGGAAGGATTTTTGCTAGGCTTTCCTAGCGTA GAAAGACCTCCGAGTCCATCTTTTATATCATTCTATGGTCCGGCCAGTTC GGGAATTGAGTATCGCGAATATGGCCTCTGCACGCTTTGCAATCTGCCTG TAGCCACTGTAGTCTGTCTTCTTGTAAGACTTTATTACCTACGTGGCACG GCTTTTTACTTTGTTTAAATATGCACAAGTGGTATTACGTGTGGGTTTCG ACTATCTAGATCTAGATTTCCAACGAAGCCAGGTCTGGTTATTCTCCCCA TTTGGCGTGAAAATAACTGCTCATTTTGTATGATGCAATGGATAACATTT TAAACGTTCCTCTCTAACTATGTCTGTAACAGGAAGGTAACCCTACCTGA TAGGCTATTATAGTTTGTTCGATAAACTGTGTACCAATAGCTAGAGTTCG GCGTGGGCACGTTGAACTTTTGTCTTGTTTGTTTTCATTGGAATATGTAG TAGGTTTTGCCGCAGTTCTAATACTTTCTGGCGTTGTACTTTCAATTTTT CGCTTTATACTTCAGGTAGTAGTGGAATTTTTTAACAGAGATGCATATGC AAAGTTGCGGTCGCAAAGGTTGGCGCGCTGGTGTCTACGGGGGGTGTAAG CTGATGATATGTTAAAGGGTGCCGCTTGAGGGCCAGATAAGTTTGAGAAA ATGGGAGTTCAGGGTTGAGAGAAGAGTGAGAAAGGTGTGCATCACCTCTG CGCAGATAACACTAAAACTATCTGAACTCTGGTAACATATTCCTGGACCT TGGTGAAAAACCCGACAAATATTTCCCCGGCATAGTAGGGGCGCGTGGAG ATACTGTCTAGGACATGGCGTACTATATTGCGTGATGTGCGTGGTTAATT TTGTTATTGCCCTCTCACAGCTCCAGGGTGTTGAGTGGGAATGGTCTGGT CGGCGGGAACCCGAGATGAACACTCCCCGGCTTCGTAGGGGGGGGGGGGA GGTAGCTTCCTCTTCAAAATTAGGTTTGTACCTGTATTGGTACTCCTATG TAGTTTATTTATGTCTGTGACTCAACTTCCGAGATTTTTGGGAGCGATCG GTTCTACTTCCTTCTTGGAGTTTTTCTGCCCTAACCTGCTTCTTCTTTTT TTTAGCCTGTATCATTTTTTTGGCAAGTGTTGGAACTTTCTCTGTTTTGT TTGTTTGTTTTTTTTCTGTAATTTAGTTTGGGTTAGCCTGTGACCACGGA AATTGGTTTCTTTGCCTTGAAGAGTAAGAAAGAGAAGGTACTGGATAGAG GTCAGAACGGTTATTTAATGTGAAGACAACAACATCAACTTGTTATTTGA GGCCTCCCATATCTATGAGTAGCAGGTATCGTTTAT
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Coding sequence (CDS) from alignment at F-distichus_contig10780:3686..7271-

>mRNA_F-distichus_contig10780.666.1 ID=mRNA_F-distichus_contig10780.666.1|Name=mRNA_F-distichus_contig10780.666.1|organism=Fucus distichus monoicous|type=CDS|length=900bp|location=Sequence derived from alignment at F-distichus_contig10780:3686..7271- (Fucus distichus monoicous)
ATGAAGGACGCCGGTATAGCCATTCTGGAGTCTTTTGACGCCGACATCCA
CGACAACACCTTCACGGACGTCAAGTACGGCATCCGTATCAGTCTGGGCG
GAGCAAACAACAACGTGTACGACAACGTGTTTGACGAATGCTCAAAATAT
GAAGGACGCCGGTATAGCCATTCTGGAGTCTTTTGACGCCGACATCCACG
ACAACACCTTCACGGACGTCAAGTACGGCATCCGTATCAGTCTGGGCGGA
GCAAACAACAACGTGTACGACAACGTGTTTGACGAATGCTCAAAATATGG
TTTGTACACCTACCAGGGTTCAGACGAGCCCGACGTTTCTTCCGACGGCC
GGCCTAGCGAGAACCGCTTCTACGACAACACAATCTCCAACACCAAGACG
GGTGTCAAGATCAAAGAAGGAGACAACACCATTATCACTGATGGTTTGTA
CACCTACCAGGGTTCAGACGAGCCCGACGTTTCTTCCGACGGCCGGCCTA
GCGAGAACCGCTTCTACGACAACACAATCTCCAACACCAAGACGGGTGTC
AAGATCAAAGAAGGAGACAACACCATTATCACTGATAACACCTTCACGGG
GACTTCTATTCTCGAATTTAACGACGCTACGGGTACTGCGTGGTCGAGCA
ACACTTTCGAGGACGCTGACGACGATCTCTGCTACAAGAACTTTGAGGAC
AGCTCGTTCACGTCCACCGATACTCTTCCCCCGCTGTGCTAAATAACACC
TTCACGGGGACTTCTATTCTCGAATTTAACGACGCTACGGGTACTGCGTG
GTCGAGCAACACTTTCGAGGACGCTGACGACGATCTCTGCTACAAGAACT
TTGAGGACAGCTCGTTCACGTCCACCGATACTCTTCCCCCGCTGTGCTAA
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