mRNA_F-distichus_contig10775.655.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10775.655.1
Unique NamemRNA_F-distichus_contig10775.655.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10775.655.1 vs. uniprot
Match: D7FUY8_ECTSI (Similar to Cullin-1 (CUL-1) isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY8_ECTSI)

HSP 1 Score: 476 bits (1226), Expect = 4.640e-156
Identity = 229/268 (85.45%), Postives = 250/268 (93.28%), Query Frame = 1
Query:   79 EGGYVYPAGLLQLPLHFEAFTFVLTAGCWPLQAVSSPFKPPAPIEDYVVSFLDFYGEVHSGRKLEWLYHLGHGEMVTHCFERTYRIYSSTFQIGLLHQFNDREEIDVSDLARGINVSSTEIVRHLFPLIKSGLLRLRGQDGSDLRPTSCDDIPSGSRARLNFYFSHKRSRVKINIVDHSRQPSKESKPSLETIQDRKMSVQAAICRVMKVRKEATHRDLVMQVREQLKHLFDIDPSFVKRNVEDLINKDYLHRLEGREPSAQGYKYVA 882
            EGG+VYPAGL+QLP+HFEAFTFVLTAGCWPLQ+VSS FKPPAPIEDYVVSFLDFY EVHSGRKLEWLYHLGHGEMVTHCF++TYRIYSSTFQ+GLLHQFND  EI VS+LARGINVS TEIVRHLFPLIK+GLLRL G DG+DL+PTSCDDIP G+RARLN  FSHKR+RVKINIVDHSRQP KE+KPS E IQDRKMSVQAAI RVMK+RKEA+HRDLV+QVREQL+HLFD+DP FVKRN+EDLINKDYLHRLEGREP  +GYKYVA
Sbjct:  569 EGGFVYPAGLVQLPMHFEAFTFVLTAGCWPLQSVSSSFKPPAPIEDYVVSFLDFYSEVHSGRKLEWLYHLGHGEMVTHCFDKTYRIYSSTFQMGLLHQFNDSTEIAVSELARGINVSDTEIVRHLFPLIKAGLLRLHGADGADLKPTSCDDIPPGARARLNASFSHKRTRVKINIVDHSRQPLKEAKPSTEIIQDRKMSVQAAISRVMKIRKEASHRDLVVQVREQLRHLFDVDPPFVKRNIEDLINKDYLHRLEGREPGKEGYKYVA 836          
BLAST of mRNA_F-distichus_contig10775.655.1 vs. uniprot
Match: A0A6H5JUU8_9PHAE (CULLIN_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU8_9PHAE)

HSP 1 Score: 452 bits (1163), Expect = 1.510e-149
Identity = 217/260 (83.46%), Postives = 240/260 (92.31%), Query Frame = 1
Query:  103 GLLQLPLHFEAFTFVLTAGCWPLQAVSSPFKPPAPIEDYVVSFLDFYGEVHSGRKLEWLYHLGHGEMVTHCFERTYRIYSSTFQIGLLHQFNDREEIDVSDLARGINVSSTEIVRHLFPLIKSGLLRLRGQDGSDLRPTSCDDIPSGSRARLNFYFSHKRSRVKINIVDHSRQPSKESKPSLETIQDRKMSVQAAICRVMKVRKEATHRDLVMQVREQLKHLFDIDPSFVKRNVEDLINKDYLHRLEGREPSAQGYKYVA 882
            G  +LP+HFEAFTFVLTAGCWPLQ+VSS FKPPAPIEDYVVSFLDFY EVHSGRKLEWLYHLGHGEMVTHCF++TYRIYSSTFQ+GLLHQFNDR EI V +LARGINVS TEIVRHLFPLIK+GLLRL G DG+DL+PTSCDDIP G+RARLN  FSHKR+RVKINIVDHSRQP KE+KPS E IQDRKMSVQAAI RVMK+RKEA+HRDLV+QV+EQL+HLFD+DP FVKRN+EDLINKDYLHRLEG++P  +GYKYVA
Sbjct:  349 GRRRLPMHFEAFTFVLTAGCWPLQSVSSSFKPPAPIEDYVVSFLDFYSEVHSGRKLEWLYHLGHGEMVTHCFDKTYRIYSSTFQMGLLHQFNDRTEIAVGELARGINVSDTEIVRHLFPLIKAGLLRLHGADGADLKPTSCDDIPPGARARLNASFSHKRTRVKINIVDHSRQPLKETKPSTEIIQDRKMSVQAAISRVMKIRKEASHRDLVVQVQEQLRHLFDVDPPFVKRNIEDLINKDYLHRLEGKQPGKEGYKYVA 608          
BLAST of mRNA_F-distichus_contig10775.655.1 vs. uniprot
Match: A0A835YSZ1_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ1_9STRA)

HSP 1 Score: 308 bits (788), Expect = 4.260e-91
Identity = 157/263 (59.70%), Postives = 194/263 (73.76%), Query Frame = 1
Query:   73 EGEGGYVYPAGLLQLPLHFEAFTFVLTAGCWPLQAVSSPFKPPAPIEDYVVSFLDFYGEVHSGRKLEWLYHLGHGEMVTHCFERTYRIYSSTFQIGLLHQFNDREEIDVSDLARGINVSSTEIVRHLFPLIKSGLLRLRGQDGSDLRPT---SCDDIPSGSRARLNFYFSHKRSRVKINIVDHSRQPSKESKPSLETIQDRKMSVQAAICRVMKVRKEATHRDLVMQVREQLKHLFDIDPSFVKRNVEDLINKDYLHRLEGRE 852
            EG GG    A +L     FEAFTFVLTAGCWPLQ+V+S F+PPAPI  YV  FL+FY EVHS RKLEWLYHLGHGEM   CF++ YR+YSSTFQ+G+L+QFN R+ I VSD+A+GI +S TE+ RHL+PLIK+GLL +R   G D+R     SCDDI       +N  F+ KRSR+KINIVDHSRQP K   P +E I DRK SVQAA+CR+MK R+E  HRDL  +V+ QL HLF  D  F+K+ +E+LI+KDYL R+EG++
Sbjct:  596 EGPGG----ASVLSSGSGFEAFTFVLTAGCWPLQSVNSTFQPPAPIHTYVQRFLEFYNEVHSRRKLEWLYHLGHGEMSARCFDKPYRVYSSTFQMGVLYQFNARDAIGVSDIAKGIAISETELSRHLYPLIKAGLLVVRDAAGQDVRGAQMQSCDDIIPQHVIAINTAFTSKRSRIKINIVDHSRQPVKGDVPPVELISDRKASVQAAVCRIMKARRELAHRDLCTEVKAQLVHLFVPDVPFIKKCIEELIDKDYLGRVEGKD 854          
BLAST of mRNA_F-distichus_contig10775.655.1 vs. uniprot
Match: A0A6V1QSV4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QSV4_HETAK)

HSP 1 Score: 173 bits (438), Expect = 2.610e-42
Identity = 93/252 (36.90%), Postives = 148/252 (58.73%), Query Frame = 1
Query:  130 EAFTFVLTAGCWPLQAVSSPFKPPAPIEDYVVSFLDFYGEVHSGRKLEWLYHLGHGEMVTHCFERTYRIYSSTFQIGLLHQFNDREEIDVSDLARGINVSSTEIVRHLFPLIKSGLLRLRGQDGSDLRPTSCDDIPSGSRARLNFYFSHKRSRVKINIVDHSRQPSKESKPSL--ETIQDRKMSVQAAICRVMKVRKEATHRDLVMQVREQLKHLFDIDPSFVKRNVEDLINKDYLHRLEGREPSAQGYKYV 879
            EA++F+LTAGCWP++A +   + P  +++Y+ +F  FY E ++GR L++L+HLGH E+ T C+   Y + +ST+ + LL +FN  + + +  L   + +   E  R LFP++K  LL ++G +     PT  + +      R+N  F  KR+R+K+     +++ +++    +  E I DRKM  QAAI R MK R+   H DL+ +V  Q+  L+  D  FVK+ +EDLI+KDYL R EG      GY YV
Sbjct:  619 EAYSFILTAGCWPVKAKNLNLQLPVLVQEYIGAFTTFYNETYTGRCLKYLFHLGHAEISTRCYGGRYTLVASTYAMLLLLEFNHSDALSLGALCATLQMEPKETARQLFPMLKLKLLSVQGLEN----PTDHEALKDSDVIRVNPRFHSKRTRIKLPSPPENKKVAQQQNLEIREELIADRKMVTQAAIVRTMKARRAMGHNDLLAEVTRQVAKLYTADVKFVKQQIEDLIDKDYLERREG---GGDGYAYV 863          
BLAST of mRNA_F-distichus_contig10775.655.1 vs. uniprot
Match: A0A3N0XV75_ANAGA (Cullin-1 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0XV75_ANAGA)

HSP 1 Score: 146 bits (369), Expect = 3.030e-35
Identity = 94/259 (36.29%), Postives = 139/259 (53.67%), Query Frame = 1
Query:  118 PLHFEAFTFVLTAGCWPLQAVSSPFKPPAPIEDYVVSFLDFYGEVHSGRKLEWLYHLGHGEMVTHCFERTYRIYSSTFQIGLLHQFNDREEIDVSDLARGINVSSTEIVRHLFPLIKSGLLRLRGQ----DGSDLRPTSCDDIPSGSRARLNFYFSHKRSRVKINIVDHSRQPSKESKPSLETIQDRKMSVQAAICRVMKVRKEATHRDLVMQVREQLKHLFDIDPSFVKRNVEDLINKDYLHRLEGREPSAQGYKYVA 882
            PL  +    VL++G WP Q  S  F  P+ +E     F  FYG  HSGRKL WLYHL  GE+VT+CF+  Y + +STFQ+ +L QFN      V  LA    + +  +V+ L  L+KS LL L  +    D  D +P   D I      +L   + +K+ RV IN+   + Q  ++        +DRK+ +QAAI R+MK+RK   H+ L+ +V  QL   F      +K+ ++ LI K+YL R++G + +   Y Y+A
Sbjct:  144 PLDLDFSIQVLSSGSWPFQQ-SCTFALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKNRYTLQASTFQMAILLQFNTENSYTVQQLADSTQIKTDILVQVLQILLKSKLLVLEDENANIDEMDFKP---DTI-----IKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDT---YSYLA 390          
BLAST of mRNA_F-distichus_contig10775.655.1 vs. uniprot
Match: A0A5N5T0S3_9CRUS (Cullin-1 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5T0S3_9CRUS)

HSP 1 Score: 146 bits (368), Expect = 3.120e-34
Identity = 90/255 (35.29%), Postives = 138/255 (54.12%), Query Frame = 1
Query:  118 PLHFEAFTFVLTAGCWPLQAVSSPFKPPAPIEDYVVSFLDFYGEVHSGRKLEWLYHLGHGEMVTHCFERTYRIYSSTFQIGLLHQFNDREEIDVSDLARGINVSSTEIVRHLFPLIKSGLLRLRGQDGSDLRPTSCDDIPSGSRARLNFYFSHKRSRVKINIVDHSRQPSKESKPSLETIQDRKMSVQAAICRVMKVRKEATHRDLVMQVREQLKHLFDIDPSFVKRNVEDLINKDYLHRLEGREPSAQGYKYVA 882
            PL  +    VL++G WP Q  S PF  P  +E  V  F  FY   HSGR+L WLYHL  GE+VT+CF+  Y + +STFQ+ +L QFN  + + +S L     +S   +++ +  L+K  LL    +D           + S SR  L   + +K+ RV IN+   +    ++        +DRK+ +QAAI R+MK+RK   H+ L+M+V  QL   F      +KR ++ LI K+YL R++G++ +   Y Y+A
Sbjct:  272 PLDLDFSIQVLSSGSWPFQQ-SQPFTLPHELERSVSRFTTFYSSQHSGRRLNWLYHLSKGEIVTNCFKNRYTLQASTFQMAVLLQFNSTDTLLISQLQELTGISQDILIQVVQILLKCKLLISEDED----------KVCSDSRVNLFLGYKNKKLRVNINVPMKTEVKIEQELTHKHIEEDRKLLIQAAIVRIMKMRKICKHQQLLMEVLNQLTPRFKPRVPTIKRCIDILIEKEYLERIDGQKDT---YSYLA 512          
BLAST of mRNA_F-distichus_contig10775.655.1 vs. uniprot
Match: A0A210QKV5_MIZYE (Cullin-1 n=2 Tax=Pectinidae TaxID=6566 RepID=A0A210QKV5_MIZYE)

HSP 1 Score: 148 bits (373), Expect = 5.320e-34
Identity = 90/246 (36.59%), Postives = 136/246 (55.28%), Query Frame = 1
Query:  145 VLTAGCWPLQAVSSPFKPPAPIEDYVVSFLDFYGEVHSGRKLEWLYHLGHGEMVTHCFERTYRIYSSTFQIGLLHQFNDREEIDVSDLARGINVSSTEIVRHLFPLIKSGLLRLRGQDGSDLRPTSCDDIPSGSRARLNFYFSHKRSRVKINIVDHSRQPSKESKPSLETIQDRKMSVQAAICRVMKVRKEATHRDLVMQVREQLKHLFDIDPSFVKRNVEDLINKDYLHRLEGREPSAQGYKYVA 882
            VL++G WP Q  SS F  P  +E     F  FY   HSGRKL WLYH+  GE+VTHCF+  Y + +STFQI +L QFN  + + V  +     +    +V+ L  L+KS LL +  +D + L P +        +  L F + +K+ RV IN+   S   +++        +DRK+ +QAAI R+MK+RK   H+ L+ +V  QL   F      +K+ ++ LI K+YL R+EG++ +   Y Y+A
Sbjct:  543 VLSSGSWPFQQSSSAFSLPQEMERSFQRFTCFYSNRHSGRKLNWLYHMSKGELVTHCFKNRYTLQASTFQIAVLLQFNITDSMSVQQVQDSTQIKMDTLVQVLQILLKSKLL-VTEEDENTLSPLA--------QLSLFFGYKNKKLRVNINVPMKSEVKTEQEATHKHIEEDRKLLIQAAIVRIMKMRKMLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLARVEGQKDT---YSYLA 776          
BLAST of mRNA_F-distichus_contig10775.655.1 vs. uniprot
Match: A0A813WU49_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813WU49_9BILA)

HSP 1 Score: 147 bits (372), Expect = 7.450e-34
Identity = 91/258 (35.27%), Postives = 135/258 (52.33%), Query Frame = 1
Query:  109 LQLPLHFEAFTFVLTAGCWPLQAVSSPFKPPAPIEDYVVSFLDFYGEVHSGRKLEWLYHLGHGEMVTHCFERTYRIYSSTFQIGLLHQFNDREEIDVSDLARGINVSSTEIVRHLFPLIKSGLLRLRGQDGSDLRPTSCDDIPSGSRARLNFYFSHKRSRVKINIVDHSRQPSKESKPSLETIQDRKMSVQAAICRVMKVRKEATHRDLVMQVREQLKHLFDIDPSFVKRNVEDLINKDYLHRLEGREPSAQGYKYVA 882
            +Q PL+ + +  VL++G WP Q    P   P  +E     F DFY   H+GRKL WLY    GE+VT+CF+  Y + +ST+QI +L  FN++ E  V D+     +    +V+ L  L KS LL     D  D+      DI   +  RL   + +K+ R+ IN    S    ++ K      +DRK+ +QAAI R+MK+RK   H  L+ +V  QL   F      +K+ ++ LI K+YL RLE  + S   Y+Y+A
Sbjct:  542 IQQPLNLDFYIMVLSSGSWPFQQCH-PLTLPTELEKSYQRFTDFYSSQHNGRKLSWLYSFSKGEVVTNCFKNRYTLQASTYQIAILLLFNEKTEFLVKDIVDMTQIKMDTLVQVLAVLFKSKLLV---SDEEDIEEA---DIQLNTPVRLFLNYKNKKFRININAPIKSDIKQEDEKTHKNIEEDRKLLIQAAIVRIMKMRKVLKHTQLINEVLSQLSSRFKPKVPIIKKCIDILIEKEYLERLENEKDS---YRYLA 789          
BLAST of mRNA_F-distichus_contig10775.655.1 vs. uniprot
Match: UPI000B382AFE (cullin-1 n=1 Tax=Helicoverpa armigera TaxID=29058 RepID=UPI000B382AFE)

HSP 1 Score: 147 bits (372), Expect = 7.650e-34
Identity = 94/255 (36.86%), Postives = 140/255 (54.90%), Query Frame = 1
Query:  118 PLHFEAFTFVLTAGCWPLQAVSSPFKPPAPIEDYVVSFLDFYGEVHSGRKLEWLYHLGHGEMVTHCFERTYRIYSSTFQIGLLHQFNDREEIDVSDLARGINVSSTEIVRHLFPLIKSGLLRLRGQDGSDLRPTSCDDIPSGSRARLNFYFSHKRSRVKINIVDHSRQPSKESKPSLETIQDRKMSVQAAICRVMKVRKEATHRDLVMQVREQLKHLFDIDPSFVKRNVEDLINKDYLHRLEGREPSAQGYKYVA 882
            PLH +    VL++G WP Q  SS F+ P  +E  V  F  FY   HSGRKL WLY++  GE+VT+CF+  Y + +STFQ+ +L Q+ND     VS L +   +    +++ L  L+K+ LL  +  D S+L  +S  D+  G        + +K+ RV INI   +    ++        +DRKM +QAAI R+MK RK   H+ LV++V  QL   F      +K+ ++ LI K+YL R EG + +   Y Y+A
Sbjct:  557 PLHIDFSIQVLSSGSWPFQQ-SSCFQLPTELERSVHRFTTFYSSQHSGRKLNWLYNMSKGELVTNCFKNRYTLQASTFQMAVLLQYNDNTSWTVSQLEQHTGIKGDFLIQVLQILLKAKLLVCQ-DDESELTESSVVDLYVG--------YKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDT---YSYLA 798          
BLAST of mRNA_F-distichus_contig10775.655.1 vs. uniprot
Match: A0A0S7I659_9TELE (CUL1 (Fragment) n=3 Tax=Euteleostomi TaxID=117571 RepID=A0A0S7I659_9TELE)

HSP 1 Score: 138 bits (348), Expect = 1.220e-33
Identity = 84/248 (33.87%), Postives = 137/248 (55.24%), Query Frame = 1
Query:  145 VLTAGCWPLQAVSSPFKPPAPIEDYVVSFLDFYGEVHSGRKLEWLYHLGHGEMVTHCFERTYRIYSSTFQIGLLHQFNDREEIDVSDLARGINVSSTEIVRHLFPLIKSGLLRLRGQDGSDLRPTSCDDIPSGSRARLNFYFSHKRSRVKINI-VDHSRQPSKESKPSLETIQ-DRKMSVQAAICRVMKVRKEATHRDLVMQVREQLKHLFDIDPSFVKRNVEDLINKDYLHRLEGREPSAQGYKYVA 882
            VL++G WP Q  S  F  P+ +E     F  FY   HSGRKL WLYHL  GE+VT+CF+  Y + +STFQ+ +L Q+N  +   V  L     + +  +V+ L  L+KS LL L  ++ +       D++       +  +  +K  ++++NI V    +  +E + + + I+ DRK+ +QAAI R+MK+RK   H+ L+ +V  QL   F      +K+ ++ LI K+YL R++G + +   Y Y+A
Sbjct:   20 VLSSGSWPFQQ-SCTFALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDSYTVQQLTDSTQIKTDILVQVLQILLKSKLLVLEDENAN------VDEVEFKPDTVIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDT---YSYLA 257          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10775.655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUY8_ECTSI4.640e-15685.45Similar to Cullin-1 (CUL-1) isoform 1 n=1 Tax=Ecto... [more]
A0A6H5JUU8_9PHAE1.510e-14983.46CULLIN_2 domain-containing protein n=1 Tax=Ectocar... [more]
A0A835YSZ1_9STRA4.260e-9159.70Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A6V1QSV4_HETAK2.610e-4236.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A3N0XV75_ANAGA3.030e-3536.29Cullin-1 n=1 Tax=Anabarilius grahami TaxID=495550 ... [more]
A0A5N5T0S3_9CRUS3.120e-3435.29Cullin-1 n=1 Tax=Armadillidium nasatum TaxID=96803... [more]
A0A210QKV5_MIZYE5.320e-3436.59Cullin-1 n=2 Tax=Pectinidae TaxID=6566 RepID=A0A21... [more]
A0A813WU49_9BILA7.450e-3435.27Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
UPI000B382AFE7.650e-3436.86cullin-1 n=1 Tax=Helicoverpa armigera TaxID=29058 ... [more]
A0A0S7I659_9TELE1.220e-3333.87CUL1 (Fragment) n=3 Tax=Euteleostomi TaxID=117571 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10775contigF-distichus_contig10775:5..6041 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score332.4
Seed ortholog evalue1.4e-88
Seed eggNOG ortholog2880.D7FUY8
Preferred nameCUL1
KEGG koko:K03347
KEGG Pathwayko04110,ko04111,ko04114,ko04120,ko04141,ko04310,ko04340,ko04341,ko04350,ko04710,ko05168,ko05200,map04110,map04111,map04114,map04120,map04141,map04310,map04340,map04341,map04350,map04710,map05168,map05200
KEGG ModuleM00379,M00380,M00381,M00382,M00387,M00407,M00411
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000082,GO:0000086,GO:0000151,GO:0000152,GO:0000165,GO:0000209,GO:0000278,GO:0002119,GO:0002164,GO:0002252,GO:0002376,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006275,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006513,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006915,GO:0006935,GO:0006950,GO:0006952,GO:0007049,GO:0007050,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007346,GO:0007399,GO:0007568,GO:0008150,GO:0008152,GO:0008156,GO:0008219,GO:0008283,GO:0008285,GO:0008340,GO:0008361,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009615,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009887,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010259,GO:0010265,GO:0010389,GO:0010498,GO:0010556,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010639,GO:0010646,GO:0010648,GO:0010720,GO:0010824,GO:0010826,GO:0010941,GO:0010942,GO:0010948,GO:0010972,GO:0012501,GO:0014041,GO:0014042,GO:0014066,GO:0014067,GO:0016043,GO:0016055,GO:0016310,GO:0016567,GO:0016740,GO:0019005,GO:0019219,GO:0019221,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0019941,GO:0022008,GO:0022402,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0023057,GO:0030003,GO:0030111,GO:0030154,GO:0030162,GO:0030163,GO:0030174,GO:0030178,GO:0030587,GO:0030674,GO:0031098,GO:0031146,GO:0031156,GO:0031285,GO:0031286,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031461,GO:0031625,GO:0031647,GO:0031667,GO:0031974,GO:0031981,GO:0032006,GO:0032007,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032268,GO:0032270,GO:0032297,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032535,GO:0032886,GO:0032991,GO:0033043,GO:0033262,GO:0033554,GO:0034097,GO:0035556,GO:0036211,GO:0038061,GO:0040011,GO:0042127,GO:0042176,GO:0042221,GO:0042330,GO:0042592,GO:0042594,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043161,GO:0043170,GO:0043207,GO:0043224,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043516,GO:0043518,GO:0043565,GO:0043632,GO:0043687,GO:0043900,GO:0043901,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044839,GO:0044843,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045666,GO:0045732,GO:0045786,GO:0045862,GO:0045930,GO:0045934,GO:0046605,GO:0046606,GO:0046626,GO:0046627,GO:0046916,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051052,GO:0051053,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051403,GO:0051493,GO:0051494,GO:0051603,GO:0051607,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051960,GO:0051962,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0060090,GO:0060255,GO:0060284,GO:0060548,GO:0060828,GO:0061136,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070498,GO:0070507,GO:0070555,GO:0070647,GO:0070887,GO:0071310,GO:0071345,GO:0071347,GO:0071704,GO:0071840,GO:0075260,GO:0075262,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090090,GO:0090329,GO:0090702,GO:0097159,GO:0097190,GO:0097193,GO:0098542,GO:0098771,GO:0099120,GO:0140096,GO:0198738,GO:1900076,GO:1900077,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901796,GO:1901797,GO:1901800,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902494,GO:1902531,GO:1902532,GO:1902576,GO:1902749,GO:1902750,GO:1903047,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903429,GO:1903431,GO:1903463,GO:1903464,GO:1903466,GO:1903467,GO:1904799,GO:1904801,GO:1905114,GO:1990234,GO:1990452,GO:1990837,GO:2000026,GO:2000058,GO:2000060,GO:2000104,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2001020,GO:2001021
EggNOG free text desc.ubiquitin protein ligase binding
EggNOG OGsCOG5647@1,KOG2166@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04121
Exons8
Model size1714
Cds size585
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10775.655.1prot_F-distichus_contig10775.655.1Fucus distichus monoicouspolypeptideF-distichus_contig10775 2573..5212 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929010.3524735-UTR-F-distichus_contig10775:4..431622929010.3524735-UTR-F-distichus_contig10775:4..43Fucus distichus monoicousUTRF-distichus_contig10775 5..43 +
1690885104.755851-UTR-F-distichus_contig10775:4..431690885104.755851-UTR-F-distichus_contig10775:4..43Fucus distichus monoicousUTRF-distichus_contig10775 5..43 +
1622929010.3638492-UTR-F-distichus_contig10775:59..1341622929010.3638492-UTR-F-distichus_contig10775:59..134Fucus distichus monoicousUTRF-distichus_contig10775 60..134 +
1690885104.775053-UTR-F-distichus_contig10775:59..1341690885104.775053-UTR-F-distichus_contig10775:59..134Fucus distichus monoicousUTRF-distichus_contig10775 60..134 +
1622929010.3751934-UTR-F-distichus_contig10775:665..8001622929010.3751934-UTR-F-distichus_contig10775:665..800Fucus distichus monoicousUTRF-distichus_contig10775 666..800 +
1690885104.860679-UTR-F-distichus_contig10775:665..8001690885104.860679-UTR-F-distichus_contig10775:665..800Fucus distichus monoicousUTRF-distichus_contig10775 666..800 +
1622929010.38383-UTR-F-distichus_contig10775:2521..25721622929010.38383-UTR-F-distichus_contig10775:2521..2572Fucus distichus monoicousUTRF-distichus_contig10775 2522..2572 +
1690885104.8798275-UTR-F-distichus_contig10775:2521..25721690885104.8798275-UTR-F-distichus_contig10775:2521..2572Fucus distichus monoicousUTRF-distichus_contig10775 2522..2572 +
1622929010.4389894-UTR-F-distichus_contig10775:5212..60411622929010.4389894-UTR-F-distichus_contig10775:5212..6041Fucus distichus monoicousUTRF-distichus_contig10775 5213..6041 +
1690885104.9503553-UTR-F-distichus_contig10775:5212..60411690885104.9503553-UTR-F-distichus_contig10775:5212..6041Fucus distichus monoicousUTRF-distichus_contig10775 5213..6041 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929010.3930404-CDS-F-distichus_contig10775:2572..26441622929010.3930404-CDS-F-distichus_contig10775:2572..2644Fucus distichus monoicousCDSF-distichus_contig10775 2573..2644 +
1690885104.8892689-CDS-F-distichus_contig10775:2572..26441690885104.8892689-CDS-F-distichus_contig10775:2572..2644Fucus distichus monoicousCDSF-distichus_contig10775 2573..2644 +
1622929010.4022229-CDS-F-distichus_contig10775:3038..31281622929010.4022229-CDS-F-distichus_contig10775:3038..3128Fucus distichus monoicousCDSF-distichus_contig10775 3039..3128 +
1690885104.8980687-CDS-F-distichus_contig10775:3038..31281690885104.8980687-CDS-F-distichus_contig10775:3038..3128Fucus distichus monoicousCDSF-distichus_contig10775 3039..3128 +
1622929010.4131494-CDS-F-distichus_contig10775:3672..38701622929010.4131494-CDS-F-distichus_contig10775:3672..3870Fucus distichus monoicousCDSF-distichus_contig10775 3673..3870 +
1690885104.9081042-CDS-F-distichus_contig10775:3672..38701690885104.9081042-CDS-F-distichus_contig10775:3672..3870Fucus distichus monoicousCDSF-distichus_contig10775 3673..3870 +
1622929010.421233-CDS-F-distichus_contig10775:4672..47561622929010.421233-CDS-F-distichus_contig10775:4672..4756Fucus distichus monoicousCDSF-distichus_contig10775 4673..4756 +
1690885104.9200754-CDS-F-distichus_contig10775:4672..47561690885104.9200754-CDS-F-distichus_contig10775:4672..4756Fucus distichus monoicousCDSF-distichus_contig10775 4673..4756 +
1622929010.4310923-CDS-F-distichus_contig10775:5071..52121622929010.4310923-CDS-F-distichus_contig10775:5071..5212Fucus distichus monoicousCDSF-distichus_contig10775 5072..5212 +
1690885104.9352496-CDS-F-distichus_contig10775:5071..52121690885104.9352496-CDS-F-distichus_contig10775:5071..5212Fucus distichus monoicousCDSF-distichus_contig10775 5072..5212 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10775.655.1

>prot_F-distichus_contig10775.655.1 ID=prot_F-distichus_contig10775.655.1|Name=mRNA_F-distichus_contig10775.655.1|organism=Fucus distichus monoicous|type=polypeptide|length=195bp
MVTHCFERTYRIYSSTFQIGLLHQFNDREEIDVSDLARGINVSSTEIVRH
LFPLIKSGLLRLRGQDGSDLRPTSCDDIPSGSRARLNFYFSHKRSRVKIN
IVDHSRQPSKESKPSLETIQDRKMSVQAAICRVMKVRKEATHRDLVMQVR
EQLKHLFDIDPSFVKRNVEDLINKDYLHRLEGREPSAQGYKYVA*
back to top

mRNA from alignment at F-distichus_contig10775:5..6041+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10775.655.1 ID=mRNA_F-distichus_contig10775.655.1|Name=mRNA_F-distichus_contig10775.655.1|organism=Fucus distichus monoicous|type=mRNA|length=6037bp|location=Sequence derived from alignment at F-distichus_contig10775:5..6041+ (Fucus distichus monoicous)
GTGGGGGGGGGGGCGGGGGGGGGGAGTGGAGGGGGGGGGGTGAGGGGGAG ATGAGCTCTGGGCGGCGACGTCGCGCGGGACGTGCGTGGAGGGAGAGGGT GGGTATGTGTATCCTGCGGGGTTATTACAGGTGCGATGATTTTATGTCGA GGGTCGCTTGATATGAGAACATGGTACGCCGGATCAGGGATTCTCATTCA GTTAATTTTTGGGAGCGGTTCGTGGGGGGCGGGGTTGGGAGGTTGTCTCA AACGCGGGTTTAGTTCCGTACTTGATATATAGCCCTCATGCACATTGAGG TCGATTTATTTATTACATCTGCTCCCGGTGACGGTAGATTTCGTACGAAA GTTTCTTTCTCTCCTAGCCTGACCTTTCAGGCATACGCTGTTCCACCCTA TCTACGTTGCTCGCTCTCGGTGCTCTATTAATATGCGATGCAGTCGTCGT TTTTTTTTCGCCTTTGGTACAGTGATTTCCATATATCTATCAATAAGATT GTGTATCGCACAATCGTGCGCCTTTACCTCTTCCAACGCCGACAGAGACA CTCGAGGTTTGTTTGGCTCATCCCTTACCATCCTTTTCATTCTTCGTCGT TGCAATCTACTTGTTAATTCTGCTGCTCCTTGGCGGCCCTTTCTTTTATG TACCTGTTCAGCTACCTCTGCACTTCGAGGCCTTCACCTTCGTGCTCACG GCGGGCTGCTGGCCGCTGCAAGCGGTGTCCTCGCCCTTCAAGCCTCCCGC TCCCATCGAGGACTACGTGGTCAGCTTCCTCGATTTTTACGGCGAGGTAA AGTCACCCCACCCGCGCGCGCCACGCACGACGCTGGGCACGTCCTGCTTC ATGATGTGCTGCTGTGCCGCGCATTGCCCTCGAGTGAACGGCGAACTTCT ACTCAAAAGCGTTTACAGGAGTGTAAATTGTCCAGGGCTTACGCCGGCTG GGTCTTGTGTTCGCCCGGGGAACGTGCGCGGGGACTGACAGACTGCTTGG TCTTCGTCTCTTCGAAGTCTATGGACTGCTCGCGGTTGCATTATCTTGCC GGGTTCAACAGACTGATTCATCTACGAACCTTACCTGATACTGAGACATG TTTTCAGAGCGCCCCCCCCCCCTCATTTGAAGGGCGTAAAGGTGTTTCTT TTCTTTTTTTCTCAGGAAAAAACAACACGAACACAGCCCACTCAAAAGCT AGCCATGGCGCGGTAAATTTGTGTAGGGTGTTCGCGAGGACAAGGAGTTC CTTGCGGGTTGGCATTTTGAACCCACGGAACAACTGGGCTGTTCGGATTT CTCGGCTCCTCCGATGGTTATAATTTTTTCCACACTCTTTCTCGGAACAC CGTTAGCGCCTCTTTTTTACCGTGTGGGGCAAGCCTCTGCACAACGAAAC GTCAAATCAGGGAAGCTCCCTCGCGACCATGTTGGTCTGGCCGATGATAA TAAGCTGTTAATAACAAAACTGGCTTTTCCTCAACCCAGCGCTTTCTGGC TGTGTAATTTGTAATGTGTAACTTTAATATTATACTTTCGAACCCTCAAA AGTAAGAATTCGCCGGTTTACGAATCGTCGAGCTGTAAGTGCCTTTACAG AGTTCGCTGCTTTTGGTGTTGCAGACAAACGAGAAAAACACGAAGCCGAG GATGGCCTCGCAAGGTTAAGGTTGCACGATTCTGCCTTCTCGTTGCTGCG AAAACTGTGAGAGGGACGGCGCATCCTGCCCGGACGTGATCTAAGCTTGA TCCTGGTAGTGAGGCTCCTCCCCAAAAAATTGCACAGAGTTTGGAGCATG TAGCTTCGCGGCGCAAAAAGCCGACTCTGACGGTCTTGACTTTTGGTTCC TCGTGTATCTATTCGATGGAAGGCGGGTGTCTCCCGCTCGCGAGGACGTT GGTAGCGACATACCCACAGAGCGGCGAAATAAACAGTGCGTGCACAGAGG GAGAAAATATACAGTCACGGTGCTTCAAACTACAAATGTTGTGGCGTCTG TTGTGCTTCCGGTTCGTTAGAGAAAATGAGGGAGGCTCGGGGAAGGGGGG AAGAGGGGAAGGGTTCATTCTGTAGATTTACTGTTCGGGATCGCCTAAGG TTGTTAGTTTCTCCATGTCTCGTGTTGCATAATTGTTTCAGTAATAAAGT ATATACTAGAGGGCAGAAATTGATTTTTTTCCCCGAGGAAGGTGGCAAGG GGGGTCGGGATGGGGGGGCGGGGATGCGGCAATCTCAGAGATTCATCGTT ATTGGATTATCATCTGCATTACCGCATTGCTCGTGCCGTCCGTCCGTCAT AAAACGTTGTCCGCCGCGCGTAATATCTCTGTGTGCTTTTCATCTCATCC ATTGGCGATTCATCGTGCCCGTTTCCTTTCCGTTATACCTTATACTCATC ATGCTCCTTTCTACCCTATCACATGCTTGATCGTTTTACCTCGGCACTTG CTTCTCTCGCGTACGTATGTCATCGTCGTCGTCGTCCCCCCCCCCCCTCC CTCTCTCCCGTATTAAGGTTCACTCCGGGCGCAAGCTGGAGTGGCTGTAC CACCTTGGGCATGGGGAGATGGTGACTCACTGCTTCGAAAGAACGTACCG GATTTACTCGTCCACGTTCCAGATCGGACTCTTGCATCAGGTGGAAATAT GAACGACGAGCGTTTCACCTTCCCTTGTCTATTTTTTGCTGTTATTGTTT TAAACGAGGGGTTGGGCTGGGCTCGGCTGGGGTCGCGCGAGGTCTACGGT AGCAAGGGGGCGAACGTTGCATGTCGGCTTTGGCCGAGTTGTGTGTGAGC CGGTCGGGTAGAGCGCGCGACCCAGCGCCGATGTAAGGAACGAAAAGAGA GCGCACAAAGCAACATCAGCAGGAAGACAGCAGCAGCCAGTACCAGACAT CGCCCGCTTGTCTTCCGTCGGCCGGGTGGTTGTGTCCGTGTCAATATCCG CTGTCTTGACCCCCCTCACCCTTCCCTCACCCTTCCCTCTCGTGCCTCCG CTGCCACTGTCCGAACACAAAATCCCCGAAAAAGTTCAACGACCGCGAGG AGATCGATGTGAGCGATCTTGCGCGTGGCATCAATGTCTCCAGCACCGAG ATCGTCCGTCATCTCTTCCCTCTGGTGCGCACGAATTACACCTTTACTTC ATTGAGAGTAATAGTGGTGTTTATGATACCTAATGACCGTGGAATAAGGT ACACTTCAGCCAGCTTGGAAACCGTTACTTGATCCATTATTTACCGTGTA CCTCTTGGCGTGAAACACATCGCCCTCTCGTCTAACGCGCTTTTCTTTTG GCGGCTCATTCGTACAATGGTTTCGGGGGGAGTTCCGTCGTGGAGGCTTG TTGGATTCTCTGACCGTCTTTATTAGATAGCAGTGATCGTCCCCTTGAAA TGTGTTCGTCCGTCCACATCTGGGCTCATCGGAACGGTTTGATAACTTTC TCTTGTCGCAAGTTTAGTTTGGATGTCGCTTCGGCTGTCCTTCGTCGTCG TCGTCACCGTGCTCCGACCCTTCCTGCGCCGCGCAACGACCCGAAAGGCG GTTTTTAAGTAGATATTTATTTTCTCCGCCTTGATCTTGATTTGCCTCGC CTCGCAATGCCTTTCACCTAGCCTACCCCCCTCTCCCTGGAAACGGACGA ACTACGCCCCGCCCACAGATCAAATCGGGGCTGCTTCGCCTGCGCGGCCA AGACGGATCCGACCTTAGACCCACGTCCTGCGATGACATCCCCTCGGGGT CGAGGGCGCGGCTGAATTTCTACTTCAGCCACAAGCGTTCTCGCGTGAAG ATCAACATCGTGGACCACTCGCGTCAGCCCTCGAAGGAGTCCAAGCCAAG CTTGGAGACCATCCAAGTCCGTGTCTCTCGTGTTGGTCAAGCGCCGTATC CCCCAGCTTTATGTTTATGTTTGTGTGCATGTGTCTTTTTTTGGTTGAAT TCAATCTGTATTGGAAGGGCTCATCTTGATAGCGAGTTGTTCCTGGCCCG TTCGCTGGAACGGGCAGGTCCATGGTTTTCGAAATGCCGCGCTTCTGCCC AAACGCCCGAGATCTTGATCGCTTAGGATTGGGTTTTACTAGAAGTCGGC TCGGTTCAAACGCCTTTTGTTTTTGACTGTGGGAATACGACAACGCGAGA CTCGCATCTTCGCTCGCGTTGTCCAAGCGCGCTCGCGCGTCAAGATCTTT ATCTCGGGATGACTGTAAGTTAGAAGCGATACACCACTAGACTACTCACT CATGACTGAGTAGTCTAGTGGTTTATCGCTTCTAACTTACAAAAGATTTG CGCGGAACAGTGATCTCCGGGGACCTCCCCTCGCCACGCACTGCAGTATC TACAATGGCCGCAACTAACCTTTTCATCGTTATCGGGGATTGAACCGCGA ATATCCTTTGTAAGTTTGAAGCGCTAAACCACTAGACTACCAATGTCATG ACTCAGTAGTCTAGTGGTTTAGCGCTTCTAATTTACTTGACGACCCCCCC CCCCCTCGCCGGCCATTGGTTATCTCCTGCCATTGGGAATATACCGATCC CGCGAATACTCTGCACCCTCGTCTTTTTCAACTATCATGCTTCGCGTGTC GCTTTCATTCATCCTTCTTCTTCCCTCTCGGTCCCTCTTCCCTCTCGGTC AAAATATTCTATTAATAGGACCGCAAGATGTCGGTACAGGCGGCTATCTG CCGTGTCATGAAGGTTCGGAAGGAAGCGACGCACCGTGATCTCGTCATGC AGGTATGCGTTCTTCGCTCCGCTACGAGGGATGTAGGCCGTCGCACAGTA ACGTCCCTCACGAGCGATGCAAGCGCACAAAAAAATAATTTCCCAAACGC GATCGATCCCTTTGCCCGTGAAAGCTATCACACCGTTGACCTCGTCGTCG AGGAATTGAGTCAGGAGAAGAGATAGCGAGTGATCGGTTGCTTCATATAC GGTATGTTTACGATGCCATGCAGCACGGCTCCGCGTTAAGTGGTAGGGAG CGGTCGGCTGCATCTATCTCATGCATCCCATGGGTCGAACGCACGGCGCG TGGGACGCTTCTGCCAGGTCCGAGAGCAGCTCAAGCACCTGTTCGACATC GACCCGTCGTTCGTGAAGCGCAACGTCGAGGATCTGATCAACAAAGACTA TCTCCACCGCCTGGAGGGCAGAGAGCCGAGCGCGCAAGGATACAAGTATG TCGCCTAGCCCTCGGGGCCACACTGCTTTCGCGCCGCCGCGCCGTGGTGC TATCGTGGTTCACCCCAGGGGGCAGAGAGTAGGGAAAAGGGGGGAGGCGT TTTGGTTTCATTATAACATGTTTCCTAGTACCGTCGGCTGGTTGTGTGAT TTGTCATCCTGCAGCCGTGGAGCCTTTGGCGACAAGTAGTTATCTGTAGC TTGTACATCGTGGATGTTCCCGAAGCTATCACAAGGAAGCGCACGTGATC GCGGTCTCGCCGAAAGTGCGTATACGGAACGAATCCTTCCGCGTGAAGTA TACGTCTAGAGGGGATGTGCGTCAAGTCTGTCTGCCTGACCGTTTGTACA GATAGTTCTGTATCCAACATCAGGTGGGCAACGAGCCGTCAACACGTGAG GCCCGTCAGCATCTGAGAGCGATTGAATCCGGACGAGGCGGGAAGTGAGC TTGGACTCTTCCCGCCTCCCCTCTGGCGTGGCGCATTCCGCATGCCATAC TTGGGCGTGTGAAAGCATGCTCGACGAGTGTTCCGACTGGCAACAAACGT CGCTTCTGGCATGTTTTCATTTATTACTATTAATAGTTTTTTTTAAACGC TGCCGGGCGACAGGTTTCCGCCGTCTTGTTGCACAGCGTAATCGTAACTA TTAAGTATTGAAACTGTGTGCTTGTAGGCTGTGACCCACGAGCGAACGAT GGAGTCAGAAGGGAAGGGAGCTCACGGGATGAGGCCATTGACGATGACGA TGGTGACGTAAAAGTTGGTGCTATTTTTAGGGTATAGATGGTGCCGTGAA TTGTCTTGAAAAAGAAGATTCGCTGGGTTCAGTTGAT
back to top

Coding sequence (CDS) from alignment at F-distichus_contig10775:5..6041+

>mRNA_F-distichus_contig10775.655.1 ID=mRNA_F-distichus_contig10775.655.1|Name=mRNA_F-distichus_contig10775.655.1|organism=Fucus distichus monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at F-distichus_contig10775:5..6041+ (Fucus distichus monoicous)
ATGGTGACTCACTGCTTCGAAAGAACGTACCGGATTTACTCGTCCACGTT
CCAGATCGGACTCTTGCATCAGATGGTGACTCACTGCTTCGAAAGAACGT
ACCGGATTTACTCGTCCACGTTCCAGATCGGACTCTTGCATCAGTTCAAC
GACCGCGAGGAGATCGATGTGAGCGATCTTGCGCGTGGCATCAATGTCTC
CAGCACCGAGATCGTCCGTCATCTCTTCCCTCTGTTCAACGACCGCGAGG
AGATCGATGTGAGCGATCTTGCGCGTGGCATCAATGTCTCCAGCACCGAG
ATCGTCCGTCATCTCTTCCCTCTGATCAAATCGGGGCTGCTTCGCCTGCG
CGGCCAAGACGGATCCGACCTTAGACCCACGTCCTGCGATGACATCCCCT
CGGGGTCGAGGGCGCGGCTGAATTTCTACTTCAGCCACAAGCGTTCTCGC
GTGAAGATCAACATCGTGGACCACTCGCGTCAGCCCTCGAAGGAGTCCAA
GCCAAGCTTGGAGACCATCCAAATCAAATCGGGGCTGCTTCGCCTGCGCG
GCCAAGACGGATCCGACCTTAGACCCACGTCCTGCGATGACATCCCCTCG
GGGTCGAGGGCGCGGCTGAATTTCTACTTCAGCCACAAGCGTTCTCGCGT
GAAGATCAACATCGTGGACCACTCGCGTCAGCCCTCGAAGGAGTCCAAGC
CAAGCTTGGAGACCATCCAAGACCGCAAGATGTCGGTACAGGCGGCTATC
TGCCGTGTCATGAAGGTTCGGAAGGAAGCGACGCACCGTGATCTCGTCAT
GCAGGACCGCAAGATGTCGGTACAGGCGGCTATCTGCCGTGTCATGAAGG
TTCGGAAGGAAGCGACGCACCGTGATCTCGTCATGCAGGTCCGAGAGCAG
CTCAAGCACCTGTTCGACATCGACCCGTCGTTCGTGAAGCGCAACGTCGA
GGATCTGATCAACAAAGACTATCTCCACCGCCTGGAGGGCAGAGAGCCGA
GCGCGCAAGGATACAAGTATGTCGCCTAGGTCCGAGAGCAGCTCAAGCAC
CTGTTCGACATCGACCCGTCGTTCGTGAAGCGCAACGTCGAGGATCTGAT
CAACAAAGACTATCTCCACCGCCTGGAGGGCAGAGAGCCGAGCGCGCAAG
GATACAAGTATGTCGCCTAG
back to top