mRNA_F-distichus_contig107036.599.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig107036.599.1
Unique NamemRNA_F-distichus_contig107036.599.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig107036.599.1 vs. uniprot
Match: A0A6H5JWN2_9PHAE (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWN2_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 9.590e-66
Identity = 102/112 (91.07%), Postives = 105/112 (93.75%), Query Frame = 1
Query:    7 RDTLAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPYLDQWFRIAPRIHHLLTDIGFSVVRKAAVTGRHFLVVATKAGSLDLRPSDSVRAAMDEHLSTWET 342
            RD LAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPYLDQWF +APRIHHLL + GFSVVRKAAVTGRHFLVVATKAGSLDLRPSD  R AMDEHLSTW+T
Sbjct:  310 RDVLAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPYLDQWFNLAPRIHHLLAETGFSVVRKAAVTGRHFLVVATKAGSLDLRPSDRAREAMDEHLSTWQT 421          
BLAST of mRNA_F-distichus_contig107036.599.1 vs. uniprot
Match: A0A6H5LIS9_9PHAE (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LIS9_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.640e-32
Identity = 62/110 (56.36%), Postives = 77/110 (70.00%), Query Frame = 1
Query:    4 RRDTLAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPYLDQWFRIAPRIHHLLTDIGFSVVRKAAVTGRHFLVVATKAGSLDLRPSDSVRAAMDEHLST 333
            RR  LAEA+R+L+PGGS++IM+MDP APGY KLR+NP LF+I+R+TEPYLD +F  A  I   L + GF+ VRK+ VTGRH  VV  K G+ DLR     R   D HL T
Sbjct:  285 RRSILAEAFRILRPGGSVSIMEMDPSAPGYIKLRNNPMLFSILRSTEPYLDVYFSEAGNIDAELQEAGFATVRKSGVTGRHMAVVGVKGGTFDLRADFKQREKDDTHLQT 394          
BLAST of mRNA_F-distichus_contig107036.599.1 vs. uniprot
Match: A0A7S3UW00_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW00_HETAK)

HSP 1 Score: 125 bits (313), Expect = 3.230e-32
Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = 1
Query:   10 DTLAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPYLDQWFRIAPRIHHLLTDIGFSVVRKAAVTGRHFLVVATKAGSLD 282
            D L EA RLL+PGG+LAIM+MDP+APGY KLR NPFL+A++R+TEPYL++WF +AP I  L+ D GF VV K A TGRHF +VA   G  D
Sbjct:  272 DCLREARRLLRPGGALAIMEMDPEAPGYIKLRQNPFLYAVLRSTEPYLEEWFNLAPSIEELVMDAGFPVVTKTAATGRHFALVARAPGCAD 362          
BLAST of mRNA_F-distichus_contig107036.599.1 vs. uniprot
Match: A0A7S0SWC6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWC6_9STRA)

HSP 1 Score: 115 bits (287), Expect = 8.800e-29
Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 1
Query:   10 DTLAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPYLDQWFRIAPRIHHLLTDIGFSVVRKAAVTGRHFLVVATKAGSLDLRPSDSVRAAMDEHLSTWE 339
            D L EAYR+LKPGG L+I++MDP +PGY KLR  P L++I+R+TEPYLD++F +   +  +L +IGF +V     TGRH   ++ K G++D R SD  R  +D H    E
Sbjct:  203 DILKEAYRILKPGGKLSILEMDPQSPGYVKLRQTPLLYSIIRSTEPYLDEYFGLFSSLPSVLNEIGFPIVSFKEATGRHSTFISIKPGNIDYRVSDIERLKIDSHAQPLE 312          
BLAST of mRNA_F-distichus_contig107036.599.1 vs. uniprot
Match: A0A836CP77_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP77_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.900e-28
Identity = 57/95 (60.00%), Postives = 73/95 (76.84%), Query Frame = 1
Query:    4 RRDTLAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPYLDQWFRIAPRIHHLLTDIGFSVVRKAAVTGRHFLVVATKAGSLDLR 288
            RR   AEA R+LKPGG+L IM+MDPDAPG  KLR+N  LF+I+++TEPYLDQ+F  A  +   L ++GF VVR+AA TGRH  +VA KAG++DLR
Sbjct:  240 RRAIFAEALRILKPGGALGIMEMDPDAPGQVKLRANAVLFSIMKSTEPYLDQYFASAGNLAEELLEVGFPVVREAAATGRHKGMVAFKAGAVDLR 334          
BLAST of mRNA_F-distichus_contig107036.599.1 vs. uniprot
Match: A0A836CDV1_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDV1_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.230e-25
Identity = 51/95 (53.68%), Postives = 72/95 (75.79%), Query Frame = 1
Query:    4 RRDTLAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPYLDQWFRIAPRIHHLLTDIGFSVVRKAAVTGRHFLVVATKAGSLDLR 288
            RRD  A+A R+LKPGG+L ++DMDP+ P  +++RSN   ++I+++TEPYLDQ+F  AP +   LT+ GF+VVR+AAV+ R   VVA KAG+ DLR
Sbjct:  316 RRDIFAQALRVLKPGGALCMLDMDPEGPDSRRVRSNVVAYSILKSTEPYLDQYFAAAPALRQELTECGFAVVREAAVSPRLKAVVAIKAGTTDLR 410          
BLAST of mRNA_F-distichus_contig107036.599.1 vs. uniprot
Match: A0A7S4N2G6_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4N2G6_9EUKA)

HSP 1 Score: 100 bits (250), Expect = 9.480e-25
Identity = 53/118 (44.92%), Postives = 72/118 (61.02%), Query Frame = 1
Query:    7 RDTLAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPYLDQWFRIAPRIHHLLTDIGFSVVRKAAVTGRHFLVVATKA-------GSLDLRPSDSVRAAMDEHLSTWE 339
            R+  AEA R+L+PGG + + +MD D  G+ KLR+NP LFA++RATEPYLD +    P + H L  +GF  V   A TGRHF +VATK        G ++ R  ++ +   D HL TWE
Sbjct:   43 REIAAEALRVLRPGGQMWLCEMDFDTEGFAKLRANPMLFALIRATEPYLDVYADYQPSLPHDLAALGFDEVALTAATGRHFALVATKPLAGAPPRGVVNDRRHETAKE--DTHLKTWE 158          
BLAST of mRNA_F-distichus_contig107036.599.1 vs. uniprot
Match: A0A7S4B5T4_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B5T4_CHRCT)

HSP 1 Score: 104 bits (259), Expect = 4.740e-24
Identity = 54/116 (46.55%), Postives = 73/116 (62.93%), Query Frame = 1
Query:    7 RDTLAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPYLDQWFRIAPRIHHLLTDIGFSVVRKAAVTGRHFLVVATKA-----GSLDLRPSDSVRAAMDEHLSTWE 339
            RD +AEA+R+L+PGG L I +MD    G++KLR+NP LF+++RATEPYLDQ+    P++   L   GF  +  AA TGRHF +VATK      G  ++       A  D HL+TWE
Sbjct:  306 RDIVAEAFRVLRPGGQLWITEMDFSTQGFRKLRANPLLFSLIRATEPYLDQYADYQPQLPDDLLATGFRDICLAAATGRHFALVATKPRDGREGRTEIDDRRLETAKEDTHLNTWE 421          
BLAST of mRNA_F-distichus_contig107036.599.1 vs. uniprot
Match: A0A812NFZ9_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812NFZ9_9DINO)

HSP 1 Score: 97.4 bits (241), Expect = 1.410e-21
Identity = 56/119 (47.06%), Postives = 70/119 (58.82%), Query Frame = 1
Query:    7 RDTLAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPYLDQWFRIAPRIHHLLTDI-GFSVVRKAAVTGRHFLVVATKA----GSLDLRPSDSVR--AAMDEHLSTWET 342
            R   AEA RLLKPGG L I +MD  APGY +LRSNP LFA++R+TEPYLD++      +   L ++   + VR  A TGRHF  V TK      +LD R  D +      D HL TWE+
Sbjct:  282 RRVCAEALRLLKPGGQLWITEMDFSAPGYVQLRSNPLLFALIRSTEPYLDEYADSTENLFRHLAELDSVASVRLTAATGRHFAAVVTKGPGKGSTLDDRRWDELGNYVVEDTHLQTWES 400          
BLAST of mRNA_F-distichus_contig107036.599.1 vs. uniprot
Match: A0A1Q9C0G8_SYMMI (Putative methyltransferase AN0656 n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9C0G8_SYMMI)

HSP 1 Score: 95.9 bits (237), Expect = 1.100e-20
Identity = 54/121 (44.63%), Postives = 67/121 (55.37%), Query Frame = 1
Query:    1 LRRDTLAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPYLDQWFRIAPRIHHLLTDIG-FSVVRKAAVTGRHFLVVATKAGSLDLRPSD------SVRAAMDEHLSTWET 342
            + R    EA RLLKPGG L I +MD  APGY +LRSNP LFA++R+TEPYLD++      +   L ++     VR  A TGRHF VV TK    + R  D            D HL TWE+
Sbjct:  932 ITRRVCVEALRLLKPGGQLWITEMDFSAPGYVQLRSNPLLFALIRSTEPYLDEYADSTEELFRHLAELEPVESVRLTAATGRHFAVVVTKGRGKESRLDDRRWDEFGNYVVEDTHLQTWES 1052          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig107036.599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWN2_9PHAE9.590e-6691.07Methyltransf_25 domain-containing protein n=2 Tax=... [more]
A0A6H5LIS9_9PHAE1.640e-3256.36Methyltransf_25 domain-containing protein n=2 Tax=... [more]
A0A7S3UW00_HETAK3.230e-3262.64Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0SWC6_9STRA8.800e-2947.27Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A836CP77_9STRA1.900e-2860.00S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A836CDV1_9STRA2.230e-2553.68S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7S4N2G6_9EUKA9.480e-2544.92Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S4B5T4_CHRCT4.740e-2446.55Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A812NFZ9_9DINO1.410e-2147.06Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A1Q9C0G8_SYMMI1.100e-2044.63Putative methyltransferase AN0656 n=4 Tax=Symbiodi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig107036contigF-distichus_contig107036:921..1265 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score213.0
Seed ortholog evalue7.3e-53
Seed eggNOG ortholog2880.D8LD42
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Methyltransferase domain
EggNOG OGs2B2D0@1,2S0CH@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size345
Cds size345
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928997.9866796-CDS-F-distichus_contig107036:920..12651622928997.9866796-CDS-F-distichus_contig107036:920..1265Fucus distichus monoicousCDSF-distichus_contig107036 921..1265 -
1690885099.2728531-CDS-F-distichus_contig107036:920..12651690885099.2728531-CDS-F-distichus_contig107036:920..1265Fucus distichus monoicousCDSF-distichus_contig107036 921..1265 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig107036.599.1prot_F-distichus_contig107036.599.1Fucus distichus monoicouspolypeptideF-distichus_contig107036 921..1265 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig107036.599.1

>prot_F-distichus_contig107036.599.1 ID=prot_F-distichus_contig107036.599.1|Name=mRNA_F-distichus_contig107036.599.1|organism=Fucus distichus monoicous|type=polypeptide|length=115bp
LRRDTLAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPY
LDQWFRIAPRIHHLLTDIGFSVVRKAAVTGRHFLVVATKAGSLDLRPSDS
VRAAMDEHLSTWET*
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mRNA from alignment at F-distichus_contig107036:921..1265-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig107036.599.1 ID=mRNA_F-distichus_contig107036.599.1|Name=mRNA_F-distichus_contig107036.599.1|organism=Fucus distichus monoicous|type=mRNA|length=345bp|location=Sequence derived from alignment at F-distichus_contig107036:921..1265- (Fucus distichus monoicous)
CTGCGCAGGGACACTCTCGCCGAGGCCTACCGCCTCCTAAAGCCGGGAGG CAGCCTAGCCATCATGGACATGGACCCCGACGCCCCCGGCTACAAGAAGC TGCGCTCCAACCCTTTCCTGTTCGCGATCGTCCGCGCCACCGAGCCTTAC CTCGACCAGTGGTTTCGCATCGCACCGCGCATCCACCATCTTCTCACGGA CATCGGTTTCAGCGTCGTTCGGAAGGCCGCCGTCACGGGGAGGCATTTCC TCGTGGTGGCCACCAAGGCCGGCTCCCTCGACCTCCGCCCCTCGGACAGC GTTAGAGCGGCTATGGACGAGCACCTAAGCACGTGGGAGACGTGA
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Coding sequence (CDS) from alignment at F-distichus_contig107036:921..1265-

>mRNA_F-distichus_contig107036.599.1 ID=mRNA_F-distichus_contig107036.599.1|Name=mRNA_F-distichus_contig107036.599.1|organism=Fucus distichus monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at F-distichus_contig107036:921..1265- (Fucus distichus monoicous)
CTGCGCAGGGACACTCTCGCCGAGGCCTACCGCCTCCTAAAGCCGGGAGG
CAGCCTAGCCATCATGGACATGGACCCCGACGCCCCCGGCTACAAGAAGC
TGCGCTCCAACCCTTTCCTGTTCGCGATCGTCCGCGCCACCGAGCCTTAC
CTCGACCAGTGGTTTCGCATCGCACCGCGCATCCACCATCTTCTCACGGA
CATCGGTTTCAGCGTCGTTCGGAAGGCCGCCGTCACGGGGAGGCATTTCC
TCGTGGTGGCCACCAAGGCCGGCTCCCTCGACCTCCGCCCCTCGGACAGC
GTTAGAGCGGCTATGGACGAGCACCTAAGCACGTGGGAGACGTGACTGCG
CAGGGACACTCTCGCCGAGGCCTACCGCCTCCTAAAGCCGGGAGGCAGCC
TAGCCATCATGGACATGGACCCCGACGCCCCCGGCTACAAGAAGCTGCGC
TCCAACCCTTTCCTGTTCGCGATCGTCCGCGCCACCGAGCCTTACCTCGA
CCAGTGGTTTCGCATCGCACCGCGCATCCACCATCTTCTCACGGACATCG
GTTTCAGCGTCGTTCGGAAGGCCGCCGTCACGGGGAGGCATTTCCTCGTG
GTGGCCACCAAGGCCGGCTCCCTCGACCTCCGCCCCTCGGACAGCGTTAG
AGCGGCTATGGACGAGCACCTAAGCACGTGGGAGACGTGA
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