mRNA_F-distichus_contig106956.590.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig106956.590.1 vs. uniprot
Match: A0A6H5L626_9PHAE (MCM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L626_9PHAE) HSP 1 Score: 293 bits (751), Expect = 1.670e-96 Identity = 143/166 (86.14%), Postives = 153/166 (92.17%), Query Frame = 1
Query: 1 QERPTKVIACVGLGLCLARHHLFP---AAGARKRAKLTARFEGALPLWGMSDLKSNAVGKFVTVVGNVVRVSGISAMVVKAGFACPRCGCEQERQFVDGKHNPPTSCPGANCKARSFELLRSTATTVDFQKIKLQEIDDDNSEAGRIPRTVEVELHEDLVDTCIPG 489
QERPTKVIACVGLGLCLARHHL P A R+R K+TARF+GALP+WG+S+LKSNAVGKFVTVVGNVVRVSGISAMV+KA FACP+CGCEQ RQFVDGK NPPTSC GANCKARSFELLR+TATTVDFQKIKLQEI+DD SEAGRIPRTVEVELHEDLVDTCIPG
Sbjct: 9 QERPTKVIACVGLGLCLARHHLCPEGSVAAVRRRGKVTARFDGALPVWGISELKSNAVGKFVTVVGNVVRVSGISAMVLKASFACPKCGCEQTRQFVDGKFNPPTSCAGANCKARSFELLRNTATTVDFQKIKLQEIEDDTSEAGRIPRTVEVELHEDLVDTCIPG 174
BLAST of mRNA_F-distichus_contig106956.590.1 vs. uniprot
Match: D7FZW5_ECTSI (MCM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW5_ECTSI) HSP 1 Score: 292 bits (747), Expect = 3.660e-91 Identity = 142/166 (85.54%), Postives = 152/166 (91.57%), Query Frame = 1
Query: 1 QERPTKVIACVGLGLCLARHHLFP---AAGARKRAKLTARFEGALPLWGMSDLKSNAVGKFVTVVGNVVRVSGISAMVVKAGFACPRCGCEQERQFVDGKHNPPTSCPGANCKARSFELLRSTATTVDFQKIKLQEIDDDNSEAGRIPRTVEVELHEDLVDTCIPG 489
QERPTKVIACVGLGLCLARHHL P A R+R K+TARF+GALP+WG+S+LKSNAVGKFVTVVGNVVRVSGISAMV+KA FACP+CGCEQ RQFVDGK NPPTSC G NCKARSFELLR+TATTVDFQKIKLQEI+DD SEAGRIPRTVEVELHEDLVDTCIPG
Sbjct: 123 QERPTKVIACVGLGLCLARHHLCPEGSVAAVRRRGKVTARFDGALPVWGISELKSNAVGKFVTVVGNVVRVSGISAMVLKASFACPKCGCEQTRQFVDGKFNPPTSCAGTNCKARSFELLRNTATTVDFQKIKLQEIEDDTSEAGRIPRTVEVELHEDLVDTCIPG 288
BLAST of mRNA_F-distichus_contig106956.590.1 vs. uniprot
Match: A0A836CFT0_9STRA (MCM2/3/5 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT0_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.880e-45 Identity = 88/165 (53.33%), Postives = 111/165 (67.27%), Query Frame = 1
Query: 10 PTKVIACVGLGLCLAR---HHLFPAAGARKR--AKLTARFEGALPLWGMSDLKSNAVGKFVTVVGNVVRVSGISAMVVKAGFACPRCGCEQERQFVDGKHNPPTSCPGANCKARSFELLRSTATTVDFQKIKLQEIDDDNSEAGRIPRTVEVELHEDLVDTCIPG 489
P K + C+GL LCLAR H L A A R A+L+A A + L+S VGKFVTV GNVVR S ++ +V +A F C RCG Q R+F +GK PP C GANCKAR+FELLR TA TVD+Q+++LQEI+ D++E GR+PRT+E E+ EDLVD CIP
Sbjct: 90 PDKTLGCLGLALCLARAAAHPLLDTAAAAPRIAARLSAPPSAATDI---GRLRSLLVGKFVTVTGNVVRASSVAPLVTRAEFECARCGAVQARRFAEGKFAPPVRCVGANCKARTFELLRETAVTVDYQRLRLQEIEGDSTEPGRVPRTLEEEVQEDLVDLCIPS 251
BLAST of mRNA_F-distichus_contig106956.590.1 vs. uniprot
Match: A0A5D6Y160_9STRA (MCM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y160_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.410e-39 Identity = 77/172 (44.77%), Postives = 109/172 (63.37%), Query Frame = 1
Query: 1 QERPTKVIACVGLGLCLARHHLFPA---AGARKRA------KLTARFEGALPLWGMSDLKSNAVGKFVTVVGNVVRVSGISAMVVKAGFACPRCGCEQERQFVDGKHNPPTSCPGANCKARSFELLRSTATTVDFQKIKLQEIDDDNSEAGRIPRTVEVELHEDLVDTCIPG 489
QE VI C+G+ LC+ RH A AR+R+ K+ R G P+ ++ LK++ V +FV+VVG VRVS I +V + F C +C R F DGK+NPPT+C A C++R+ RST TVD+QKIK+QE++++++ GRIPR +EVEL++DLVD CIPG
Sbjct: 122 QENVEDVIPCLGIALCMLRHEQRQAQEETPARQRSVPLDRTKIAVRLHGVAPVLPLAALKADVVDQFVSVVGTCVRVSAIKPLVTRCDFVCAKCNGVTSRAFPDGKYNPPTACENAPCRSRTLLPNRSTVETVDYQKIKMQEMENNDAGPGRIPRMIEVELYDDLVDACIPG 293
BLAST of mRNA_F-distichus_contig106956.590.1 vs. uniprot
Match: W7U0Y4_9STRA (Dna replication licensing factor mcm8 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0Y4_9STRA) HSP 1 Score: 150 bits (379), Expect = 4.480e-39 Identity = 82/162 (50.62%), Postives = 100/162 (61.73%), Query Frame = 1
Query: 4 ERPTKVIACVGLGLCLARHHLFPAAGARKRAKLTARFEGALPLWGMSDLKSNAVGKFVTVVGNVVRVSGISAMVVKAGFACPRCGCEQERQFVDGKHNPPTSCPGANCKARSFELLRSTATTVDFQKIKLQEIDDDNSEAGRIPRTVEVELHEDLVDTCIPG 489
E+P + ++ +GL LA L P + L ARFE P+ M LKS VG+FVTV G V R S I +V+ A F C +CG +F DG P SCP C+ ++FEL R TA TVD+QKIKLQEIDD+ E GRIPRTVEVEL DLVDTC+PG
Sbjct: 97 EQPVQTLSLIGLAASLALG-LDPRQTGDSQG-LQARFEHVEPVAPMGSLKSGLVGRFVTVKGTVARASAIRPLVLGADFECFKCGVHMPMKFTDGIFQWPESCPTLRCRNKNFELRRETAVTVDYQKIKLQEIDDEGGEPGRIPRTVEVELRGDLVDTCVPG 256
BLAST of mRNA_F-distichus_contig106956.590.1 vs. uniprot
Match: K3X799_GLOUD (MCM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X799_GLOUD) HSP 1 Score: 150 bits (378), Expect = 5.720e-39 Identity = 77/172 (44.77%), Postives = 108/172 (62.79%), Query Frame = 1
Query: 1 QERPTKVIACVGLGLCLARHHL------FPAAGAR---KRAKLTARFEGALPLWGMSDLKSNAVGKFVTVVGNVVRVSGISAMVVKAGFACPRCGCEQERQFVDGKHNPPTSCPGANCKARSFELLRSTATTVDFQKIKLQEIDDDNSEAGRIPRTVEVELHEDLVDTCIPG 489
QE VI C+G+ LC+ RH L PA R K++ R G P+ ++ LK++ V +FV+V+G VVRVS I +V + F C +C R F DGK+NPP +C + C++R+ RST TVDFQKIK+QE+++ ++ GRIPR +EVEL+EDLVD+CIPG
Sbjct: 122 QENVEDVIPCLGIALCMLRHELRQEQEDTPARQCNVPLDRTKISVRLHGITPVLPIAALKADVVNQFVSVMGTVVRVSAIKPLVTRCDFVCVKCNEVTSRAFPDGKYNPPMACEISPCRSRTLVPNRSTVETVDFQKIKIQEMENSDAGPGRIPRMIEVELYEDLVDSCIPG 293
BLAST of mRNA_F-distichus_contig106956.590.1 vs. uniprot
Match: W2P438_PHYPR (MCM_OB domain-containing protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2P438_PHYPR) HSP 1 Score: 141 bits (356), Expect = 5.270e-38 Identity = 75/171 (43.86%), Postives = 103/171 (60.23%), Query Frame = 1
Query: 4 ERPTKVIACVGLGLCLARHHLFPAAG---ARKRA------KLTARFEGALPLWGMSDLKSNAVGKFVTVVGNVVRVSGISAMVVKAGFACPRCGCEQERQFVDGKHNPPTSCPGANCKARSFELLRSTATTVDFQKIKLQEIDDDNSEAGRIPRTVEVELHEDLVDTCIPG 489
E V+ C+G+ LC+ RH L A RKR+ K+T R G P+ ++ LK++ V +FV+VVG VVRVS I +V + F C +C R F DGK PP C + C+ R+ RS+ TVD+QKIKLQE++ + GR+PR +EVEL+EDLVD+CIPG
Sbjct: 117 ENIEDVLLCLGIALCMRRHELRVEAEEDITRKRSMPVDRTKITVRLHGVTPVLPIAALKADVVNQFVSVVGTVVRVSAIKPLVTRCDFVCAKCNEATSRAFPDGKFIPPQRCENSPCRGRTLLPNRSSVDTVDYQKIKLQEMETTDVGPGRMPRMIEVELYEDLVDSCIPG 287
BLAST of mRNA_F-distichus_contig106956.590.1 vs. uniprot
Match: A0A8K1FPC6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FPC6_PYTOL) HSP 1 Score: 143 bits (360), Expect = 1.590e-36 Identity = 73/171 (42.69%), Postives = 106/171 (61.99%), Query Frame = 1
Query: 4 ERPTKVIACVGLGLCLARHHLF---PAAGARKR------AKLTARFEGALPLWGMSDLKSNAVGKFVTVVGNVVRVSGISAMVVKAGFACPRCGCEQERQFVDGKHNPPTSCPGANCKARSFELLRSTATTVDFQKIKLQEIDDDNSEAGRIPRTVEVELHEDLVDTCIPG 489
E VI C+G+ LC+ RH + AR+R K+ R G P+ ++ LK++AV +FV+V+G VVRVS I +V + F C +CG R F DG + PP+ C + C++++ RST TVD+QKIK+QE++ ++ GRIPR +EVEL+EDLVD+CIPG
Sbjct: 124 ENVEDVICCLGIALCMVRHERRVEQEESPARQRHLRVDHTKINVRLHGVSPVLPIAALKADAVSQFVSVMGTVVRVSAIKPLVRRCDFVCAKCGEATSRAFPDGNYTPPSKCEHSPCRSKNLVPNRSTVETVDYQKIKVQEMESSDAGPGRIPRMIEVELYEDLVDSCIPG 294
BLAST of mRNA_F-distichus_contig106956.590.1 vs. uniprot
Match: A0A6A3LSF4_9STRA (DNA helicase n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3LSF4_9STRA) HSP 1 Score: 142 bits (358), Expect = 3.300e-36 Identity = 76/171 (44.44%), Postives = 103/171 (60.23%), Query Frame = 1
Query: 4 ERPTKVIACVGLGLCLARHHLFPAAG---ARKRA------KLTARFEGALPLWGMSDLKSNAVGKFVTVVGNVVRVSGISAMVVKAGFACPRCGCEQERQFVDGKHNPPTSCPGANCKARSFELLRSTATTVDFQKIKLQEIDDDNSEAGRIPRTVEVELHEDLVDTCIPG 489
E V+ C+G+ LC+ RH L A RKR+ K+T R G P+ ++ LK++ V +FV+VVG VVRVS I +V + F C +C R F DGK PP C A C+ R+ RS+ TVD+QKIKLQE++ + GR+PR +EVEL+EDLVD+CIPG
Sbjct: 469 ENIEDVLLCLGIALCMRRHELRVDAEEDVTRKRSVPVDRTKITVRLHGVTPVLPIAALKADVVNQFVSVVGTVVRVSAIKPLVTRCDFVCAKCNEATSRAFPDGKFVPPQRCENAPCRGRTLLPNRSSVDTVDYQKIKLQEMETTDVGPGRMPRMIEVELYEDLVDSCIPG 639
BLAST of mRNA_F-distichus_contig106956.590.1 vs. uniprot
Match: A0A024G6T3_9STRA (MCM domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6T3_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.560e-36 Identity = 76/163 (46.63%), Postives = 104/163 (63.80%), Query Frame = 1
Query: 1 QERPTKVIACVGLGLCLARHHLFPAAGARKRAKLTARFEGALPLWGMSDLKSNAVGKFVTVVGNVVRVSGISAMVVKAGFACPRCGCEQERQFVDGKHNPPTSCPGANCKARSFELLRSTATTVDFQKIKLQEIDDDNSEAGRIPRTVEVELHEDLVDTCIPG 489
QE P +VIAC+GL LCL R + + +++ RF P+ +S +KS+ + FV+V G +VRVS I +V + F C +CG R F DGK+NPP C A C+++ RST TT+DFQ IK+QEID + +GR+PR +EVELHEDLVD+CIPG
Sbjct: 99 QEHPEQVIACLGLALCLFRDKVQATS-----SRILVRFYDVAPVLSISQIKSHVINHFVSVRGTIVRVSPIKPLVTQCNFICGKCGRITLRVFPDGKYNPPIKCMYA-CRSKLLPD-RSTVTTIDFQTIKIQEIDHEEH-SGRVPRMIEVELHEDLVDSCIPG 253 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106956.590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig106956.590.1 >prot_F-distichus_contig106956.590.1 ID=prot_F-distichus_contig106956.590.1|Name=mRNA_F-distichus_contig106956.590.1|organism=Fucus distichus monoicous|type=polypeptide|length=163bp QERPTKVIACVGLGLCLARHHLFPAAGARKRAKLTARFEGALPLWGMSDLback to top mRNA from alignment at F-distichus_contig106956:122..1743- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig106956.590.1 ID=mRNA_F-distichus_contig106956.590.1|Name=mRNA_F-distichus_contig106956.590.1|organism=Fucus distichus monoicous|type=mRNA|length=1622bp|location=Sequence derived from alignment at F-distichus_contig106956:122..1743- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig106956:122..1743- >mRNA_F-distichus_contig106956.590.1 ID=mRNA_F-distichus_contig106956.590.1|Name=mRNA_F-distichus_contig106956.590.1|organism=Fucus distichus monoicous|type=CDS|length=978bp|location=Sequence derived from alignment at F-distichus_contig106956:122..1743- (Fucus distichus monoicous)back to top |