mRNA_F-distichus_contig10661.565.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10661.565.1
Unique NamemRNA_F-distichus_contig10661.565.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: D8LIR7_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR7_ECTSI)

HSP 1 Score: 305 bits (781), Expect = 4.890e-100
Identity = 153/170 (90.00%), Postives = 162/170 (95.29%), Query Frame = 1
Query:    1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPLQDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
            DFLNGVCTN+IVMQ+R+MKYWGGNYD Y+RTREEQD NQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLL MP+S+  +DYLFSGL+FGIDSDSRIALVGPNGAGKSTLLKLMVGQL PVEGN+SRRSGLSIGRYHQHSAEVLD  KSPVDYLK
Sbjct:  181 DFLNGVCTNIIVMQQRQMKYWGGNYDTYQRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLTMPYSKK-EDYLFSGLHFGIDSDSRIALVGPNGAGKSTLLKLMVGQLQPVEGNVSRRSGLSIGRYHQHSAEVLDLAKSPVDYLK 349          
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A6H5J9L9_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9L9_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 1.750e-96
Identity = 155/199 (77.89%), Postives = 164/199 (82.41%), Query Frame = 1
Query:    1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
            DFLNGVCTN+IVMQ+R+MKYWGGNYD Y+RTREEQD NQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLL MP+SEP+                             +DYLFSGL+FGIDSDSRIALVGPNGAGKSTLLKLMVGQL PVEGN+SRRSGLSIGRYHQHSAEVLD  KSPVDYLK
Sbjct:  273 DFLNGVCTNIIVMQQRQMKYWGGNYDTYQRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLTMPYSEPMFQFKFPECGKLQPPVISFNDVAFSYSGKKEDYLFSGLHFGIDSDSRIALVGPNGAGKSTLLKLMVGQLQPVEGNVSRRSGLSIGRYHQHSAEVLDLAKSPVDYLK 471          
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A835ZA40_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA40_9STRA)

HSP 1 Score: 255 bits (651), Expect = 3.300e-79
Identity = 129/198 (65.15%), Postives = 148/198 (74.75%), Query Frame = 1
Query:    1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYL 507
            DFLNGVCTNM+VMQER+++YWGGNYD Y  TR EQDTNQ+K+YKKQQ EI HTK FIASCGT+SNL+RQ KSRQKQLDKM EAGL++ P+ EP                              +DYLF  L FGID DSRIALVGPNGAGKSTLLKL+VG++   EG ISRRSG+S+GRYHQHSA+ LDFDKSPV+YL
Sbjct:  272 DFLNGVCTNMMVMQERQLRYWGGNYDAYVATRTEQDTNQLKMYKKQQEEIAHTKAFIASCGTYSNLIRQGKSRQKQLDKMVEAGLIQQPYEEPSFRFTFPDCGKLPPPVISFVDVAFSYSGKREDYLFRNLRFGIDCDSRIALVGPNGAGKSTLLKLIVGEIQACEGTISRRSGVSLGRYHQHSADQLDFDKSPVEYL 469          
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A5J4Z7G4_PORPP (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7G4_PORPP)

HSP 1 Score: 240 bits (613), Expect = 1.870e-73
Identity = 121/199 (60.80%), Postives = 150/199 (75.38%), Query Frame = 1
Query:    1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
            DFL+GVCT+ +V+Q +++KYWGGNY  Y++TREEQD NQ+KLYKKQQ EI+H KQFIASCGT++NLVRQAKSRQKQLDKM EAGLL+ P  +P+                             +DYL+S L+FGIDSDSRI+LVGPNGAGKSTLLKL+VG++ P EG++S +SG+ IGRYHQHS + LD D SPV+YLK
Sbjct:  285 DFLDGVCTDTMVLQRKKLKYWGGNYSQYQKTREEQDVNQMKLYKKQQDEIKHIKQFIASCGTYANLVRQAKSRQKQLDKMVEAGLLEPPVEDPIFRFKFPSPGKMAPPLVSFRDVAFSYSGKKEDYLYSDLSFGIDSDSRISLVGPNGAGKSTLLKLVVGEIQPCEGDVSLKSGVRIGRYHQHSNDQLDLDVSPVEYLK 483          
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A2V3IUK5_9FLOR (Probable ATP-dependent transporter ycf16 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3IUK5_9FLOR)

HSP 1 Score: 238 bits (608), Expect = 1.160e-72
Identity = 119/199 (59.80%), Postives = 150/199 (75.38%), Query Frame = 1
Query:    1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
            DFL+GVCT+ +VMQ++++KYWGGNY  Y RTREEQDTN++KLYKKQQ EI+H KQFIASCGT++NLVRQAKSRQKQLDKM EAGLL+ P++EP                              +DYL+S L+FGID +SR++LVGPNGAGKSTLL LM+ +L P EG +S +SGL +GRYHQHSA+ LDF+ SPV+Y++
Sbjct:  292 DFLDGVCTDTMVMQQQKLKYWGGNYSTYVRTREEQDTNKLKLYKKQQEEIKHIKQFIASCGTYANLVRQAKSRQKQLDKMVEAGLLEPPYAEPRFKFSFLGCGTLAPPLISFSDVAFSYSGKKEDYLYSNLSFGIDGESRVSLVGPNGAGKSTLLNLMLQELGPCEGTVSHKSGLRVGRYHQHSADQLDFNLSPVEYVR 490          
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A7S3HE41_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HE41_9STRA)

HSP 1 Score: 237 bits (605), Expect = 2.850e-72
Identity = 120/198 (60.61%), Postives = 143/198 (72.22%), Query Frame = 1
Query:    1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYL 507
            DFLN VCT+M+VMQE++++YW GNYD Y  TR EQ+TNQ+KLYKKQQ EIQ  KQFI+SCGT++NLVRQAKSRQK LDKME  GLL MP+ EP+                             +DYLF  ++FGI   SRI LVGPNGAGKSTL+KL+ G+  P EG +S RSGLSIGR+HQHSAE+LDFDKSPVDY+
Sbjct:  281 DFLNAVCTDMMVMQEQKLRYWSGNYDSYLNTRREQETNQIKLYKKQQGEIQEIKQFISSCGTYANLVRQAKSRQKILDKMEADGLLTMPYEEPMFRFKFADAGAMAPPLISFSEVAFSYSGLKKDYLFKNISFGIHPKSRIVLVGPNGAGKSTLIKLICGENGPTEGTVSTRSGLSIGRFHQHSAEILDFDKSPVDYI 478          
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A482SRX1_9ARCH (ABC-F family ATP-binding cassette domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRX1_9ARCH)

HSP 1 Score: 226 bits (575), Expect = 5.640e-69
Identity = 115/198 (58.08%), Postives = 144/198 (72.73%), Query Frame = 1
Query:    1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYL 507
            DFLNGVCT+ +VMQ+++++YW GNYD Y +TR EQD+NQ+KLYKKQQ EI   KQFI+SCGT++NLV+QAKSRQK LDKMEE GL+++PF EP+                             +DYLF  ++FGI  +SRI LVGPNGAGKSTLLKL+ G+  P EG +S R GLSIGR+HQHSAEVLD +KSPV+Y+
Sbjct:  199 DFLNGVCTHTMVMQQQKLRYWTGNYDAYIKTRGEQDSNQLKLYKKQQQEIADIKQFISSCGTYANLVKQAKSRQKILDKMEEEGLIQVPFEEPMFRFKFADAGELSPPLISFSEVAFSYSGQKKDYLFKDVSFGIHPNSRIVLVGPNGAGKSTLLKLICGENAPTEGTVSIRGGLSIGRFHQHSAEVLDLNKSPVEYI 396          
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A1X6NW09_PORUM (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NW09_PORUM)

HSP 1 Score: 228 bits (581), Expect = 1.500e-68
Identity = 115/199 (57.79%), Postives = 143/199 (71.86%), Query Frame = 1
Query:    1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
            DFL+GVCT+ +VMQER++KYWGGNY  Y RTR+EQD NQ+KLYKKQQ EI+HTK FI+SCGT+SNLVRQAKSRQKQLDKM EAGLLK PF +                                DYL+   +FGID DSR+ +VGPNGAGK+TL+ LM+ +L PVEG++S RSGL + ++HQHSA+ LD + SPV+YL+
Sbjct:  307 DFLDGVCTDTMVMQERQLKYWGGNYSTYVRTRKEQDVNQLKLYKKQQEEIKHTKDFISSCGTYSNLVRQAKSRQKQLDKMVEAGLLKPPFQDTQFKFRFPETSAMAPPCISFTDVAFSYSGKKADYLYKDQSFGIDCDSRVCIVGPNGAGKTTLINLMLHKLTPVEGSVSHRSGLKVAQFHQHSADQLDLEVSPVEYLR 505          
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A7S1DUN0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DUN0_HEMAN)

HSP 1 Score: 218 bits (554), Expect = 3.320e-67
Identity = 113/199 (56.78%), Postives = 141/199 (70.85%), Query Frame = 1
Query:    1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGL-----------LKMP------------------FSEPLQDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
            DFLNGVC+N++V+Q  ++KYW GNY+ Y +TR EQ+TNQ+KLY KQQ EI+H K+FIASCGTF+NLVRQAKSRQK LDKMEEAGL           LK P                  +S   +DYL+ GLN G+DSDSRIAL+GPNGAGKSTL+KLM  +L P EG + RR GL IGR+ QHS + L+ + SPV+Y++
Sbjct:   32 DFLNGVCSNIMVLQRSKLKYWAGNYEQYVKTRTEQETNQMKLYAKQQEEIKHAKEFIASCGTFANLVRQAKSRQKMLDKMEEAGLIEPVHQEKKLVLKFPECGRLVPPLIALNDVAFSYSGKKKDYLYKGLNIGVDSDSRIALLGPNGAGKSTLVKLMCAELMPTEGTVQRRPGLKIGRFSQHSNDQLEPELSPVEYIQ 230          
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A0S4JUD9_BODSA (ABC transporter, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JUD9_BODSA)

HSP 1 Score: 218 bits (554), Expect = 1.320e-65
Identity = 110/199 (55.28%), Postives = 142/199 (71.36%), Query Frame = 1
Query:    1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
            DFLNGVCT+++VM ++++K W GNYD Y +T+ E +TNQ+K YKKQQ +IQ  K+FIASCGTF+NLV+QA+SRQK LDKME AGL+KMPF EP+                             +DYLF  ++FGI   SRIALVGPNGAGKSTL+KL+ G+  P EG ++R   L+IGR+HQHSAEVLD DK+PV+Y++
Sbjct:  272 DFLNGVCTDILVMSQKKLKAWTGNYDTYIKTKSEVETNQIKAYKKQQEDIQDIKKFIASCGTFANLVKQAQSRQKILDKMEAAGLIKMPFVEPIFRFRFHEGGAINGVLVSASGSAFSYTGKKEDYLFKNVDFGIWPTSRIALVGPNGAGKSTLIKLICGENEPCEGTMTRAGSLTIGRFHQHSAEVLDLDKTPVEYIE 470          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIR7_ECTSI4.890e-10090.00Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
A0A6H5J9L9_9PHAE1.750e-9677.89ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835ZA40_9STRA3.300e-7965.15P-loop containing nucleoside triphosphate hydrolas... [more]
A0A5J4Z7G4_PORPP1.870e-7360.80Probable ATP-dependent transporter ycf16 n=1 Tax=P... [more]
A0A2V3IUK5_9FLOR1.160e-7259.80Probable ATP-dependent transporter ycf16 n=2 Tax=R... [more]
A0A7S3HE41_9STRA2.850e-7260.61Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482SRX1_9ARCH5.640e-6958.08ABC-F family ATP-binding cassette domain-containin... [more]
A0A1X6NW09_PORUM1.500e-6857.79Probable ATP-dependent transporter ycf16 n=1 Tax=P... [more]
A0A7S1DUN0_HEMAN3.320e-6756.78Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A0S4JUD9_BODSA1.320e-6555.28ABC transporter, putative n=1 Tax=Bodo saltans Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10661contigF-distichus_contig10661:464..3669 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.0
Seed ortholog evalue5.6e-75
Seed eggNOG ortholog2880.D8LIR7
Preferred nameARB1
KEGG koko:K06185
Hectar predicted targeting categoryother localisation
GOsGO:0000054,GO:0000056,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006403,GO:0006405,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0007154,GO:0008104,GO:0008144,GO:0008150,GO:0009267,GO:0009605,GO:0009653,GO:0009987,GO:0009991,GO:0015031,GO:0015833,GO:0015931,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022613,GO:0030554,GO:0030587,GO:0030684,GO:0030687,GO:0031152,GO:0031288,GO:0031503,GO:0031667,GO:0031668,GO:0031669,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033554,GO:0033750,GO:0034613,GO:0035639,GO:0036094,GO:0042254,GO:0042594,GO:0042624,GO:0042886,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044424,GO:0044464,GO:0044764,GO:0045184,GO:0046907,GO:0048856,GO:0050657,GO:0050658,GO:0050896,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051703,GO:0051704,GO:0051716,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071496,GO:0071702,GO:0071705,GO:0071840,GO:0090702,GO:0097159,GO:0097367,GO:0098630,GO:0098743,GO:0099120,GO:1901265,GO:1901363,GO:1990904
EggNOG free text desc.ATPase activity
EggNOG OGsCOG0488@1,KOG0927@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons5
Model size510
Cds size483
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10661.565.1prot_F-distichus_contig10661.565.1Fucus distichus monoicouspolypeptideF-distichus_contig10661 464..3642 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928993.4701319-CDS-F-distichus_contig10661:463..5921622928993.4701319-CDS-F-distichus_contig10661:463..592Fucus distichus monoicousCDSF-distichus_contig10661 464..592 -
1690885096.9431949-CDS-F-distichus_contig10661:463..5921690885096.9431949-CDS-F-distichus_contig10661:463..592Fucus distichus monoicousCDSF-distichus_contig10661 464..592 -
1622928993.4966607-CDS-F-distichus_contig10661:1293..13931622928993.4966607-CDS-F-distichus_contig10661:1293..1393Fucus distichus monoicousCDSF-distichus_contig10661 1294..1393 -
1690885097.0181491-CDS-F-distichus_contig10661:1293..13931690885097.0181491-CDS-F-distichus_contig10661:1293..1393Fucus distichus monoicousCDSF-distichus_contig10661 1294..1393 -
1622928993.517138-CDS-F-distichus_contig10661:2153..22061622928993.517138-CDS-F-distichus_contig10661:2153..2206Fucus distichus monoicousCDSF-distichus_contig10661 2154..2206 -
1690885097.0320988-CDS-F-distichus_contig10661:2153..22061690885097.0320988-CDS-F-distichus_contig10661:2153..2206Fucus distichus monoicousCDSF-distichus_contig10661 2154..2206 -
1622928993.5365362-CDS-F-distichus_contig10661:2486..25971622928993.5365362-CDS-F-distichus_contig10661:2486..2597Fucus distichus monoicousCDSF-distichus_contig10661 2487..2597 -
1690885097.0436735-CDS-F-distichus_contig10661:2486..25971690885097.0436735-CDS-F-distichus_contig10661:2486..2597Fucus distichus monoicousCDSF-distichus_contig10661 2487..2597 -
1622928993.5531893-CDS-F-distichus_contig10661:3552..36421622928993.5531893-CDS-F-distichus_contig10661:3552..3642Fucus distichus monoicousCDSF-distichus_contig10661 3553..3642 -
1690885097.0552614-CDS-F-distichus_contig10661:3552..36421690885097.0552614-CDS-F-distichus_contig10661:3552..3642Fucus distichus monoicousCDSF-distichus_contig10661 3553..3642 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928993.570484-UTR-F-distichus_contig10661:3642..36691622928993.570484-UTR-F-distichus_contig10661:3642..3669Fucus distichus monoicousUTRF-distichus_contig10661 3643..3669 -
1690885097.06529-UTR-F-distichus_contig10661:3642..36691690885097.06529-UTR-F-distichus_contig10661:3642..3669Fucus distichus monoicousUTRF-distichus_contig10661 3643..3669 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10661.565.1

>prot_F-distichus_contig10661.565.1 ID=prot_F-distichus_contig10661.565.1|Name=mRNA_F-distichus_contig10661.565.1|organism=Fucus distichus monoicous|type=polypeptide|length=161bp
MIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIAS
CGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPLQDYLFSGLNFGIDSD
SRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVL
DFDKSPVDYLK
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mRNA from alignment at F-distichus_contig10661:464..3669-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10661.565.1 ID=mRNA_F-distichus_contig10661.565.1|Name=mRNA_F-distichus_contig10661.565.1|organism=Fucus distichus monoicous|type=mRNA|length=3206bp|location=Sequence derived from alignment at F-distichus_contig10661:464..3669- (Fucus distichus monoicous)
GACTTCCTTAACGGTGTGTGCACGAACATGATAGTGATGCAGGAGCGGGA AATGAAGTACTGGGGTGGGAACTACGACATCTACAGGCGGACGCGCGAGG AACAGGACACGAACCAGGTCTGGTCTGTTGAGAGACACTCCATGCACACA CACACACACACAGAAGACAAGGAGAGGGTTTGTTGATCGCTTGAAATATT TATGTACAACTCAACTGATGGATCGATTAGCCTCTGTGTTGTCATAGTCG TGATGACCTTCAGGAAACCGAGAGGGGGAAAATGGTAGGTGGAAGTTTAG CCTCTATGTTGTCATAGTCGTGATGACCTTCTGGAAACCGAGAAGGGGAA AATGGTGGGAGGGAGTTTAGCCTCTATGTTGTCATAGTCGTGGTGGTCTT CTGGAAACCGAGAGGGGGAAAATAGTGGGTGGGAGTTTAGCCTCTATGTT GTCATAGTCGTGATGATCTTCTGGAAACCCAGGGGGGGAAATAGTTGGTG GGAGTTCGTAGTTTAGCTTTTGTGGCGCTTCTCACGAGTATTGTTATTGC CTTTCTTGTTGTTGGCTTACTGATGACAAAAATATTCAATATTTCGAGGC TGACCTAAACGTTTTGACTTTTTTTTTCCCTGAGTAGCGGTTTGTCACCA TGATGTGACCCGTCGACCTTGGTGCCTCTTTGTGACCCCAAGCGGGATTG GCACTTGATAGGTCTATGGCTGACTTGTTGCGTCACCGTAGTTTTTTTCA TGTGCTAGGACAATACGCTGAATGTGTGAATCGACAGGCCATGAAGAGGC TTTGACTATGATCCCACCTGAACGTTTTGACATTTTTCCCCCCTGACTGG GGGATGATGGATGATGGTATAATGATGCCCACAAGGTCTAGATGCGTCCA GATTTTTATTTAAATTACTTGTTGCGCCTTGCGTGTTGTTTGTATGCTCG TTTTGAGGGGGGGGGGCTGTTTTGAAGGCTAGAACACCCGCGAGTATTGA ACTCACACACCCCACTCTTACCTTGTCTCTCTCTCTCCGGTCGTGTACCG CCGATTGGGGTTTCCATTGTAGGTGAAACTGTACAAGAAACAGCAGGCGG AGATTCAGCACACGAAGCAGTTTATCGCCTCGTGCGGAACCTTCTCTAAC CTCGTGCGCCAGGCGAAGTCCCGCCAAAAGCAGGTGACGCAATAGACTGC AATCAAAATAATGGGTGTACACGTCCGTATAGATCGGTAGGTGTGCTACG TAAATGTACGGGTTGTGCAAAGGACTTGTATAATGCGTTGCATTGTTCTG TATGCTTCCGACATCTTCGATGTGAATGCATTGCTGTAATGAATACACCT GTAACCTTTGTGACTTGATACTCTGTCTTGTGTACCGTACATTTGTAAGA TGTGTGAACCCGTGTGCCATTGTTTGTAACATGGTTTTATCATATTTTGT TGTTTTCCGACAGTTGGATAAGATGGAGGAGGCCGGTCTGCTCAAGATGC CCTTCTCGGAGCCGCTGTTTCAGTTCAAGTTCCCGGAGTGAGTGTTTTTT CAAGTAAATAGTGATTATAGGAAGAAAGAAAAAATGTTTTCCCCTGTTCA AACCTTTTACCACAGTTGAAGCAGGATCGGCAACCATGACGCGGTTGGCG CCGAATCTGCAGAAAGTGATGACCAAACACGCTGCACATACTAAAAAACT ATAATTAACTTTTCTGAATTACATTAGTCGATGCAGCACTCAAATCGCCT ACTTACGGCCGAACAAACCCCCGTCCCCACCCAAGAAAAGCGCGTTTGTG ACCAGAGCTTGTATTTACATTTCGGCCCTGTCATGTCATAGTCATTCCGT GCGATTCAATCCTCGCAGCATTGGTCCTCTTTCAATGGGGCATATCAATC ATTGCTGTCACAATAACCTCGGATGATATGTGTGTGTTTTTGTTTTTGTT TCATTATGATACGAGAGAGACCCAGCCGATGGACGAAAGTAGTGTAATAA TAATATGTATGTCCAAAAGGGATGTTGGTCGTCATATATGTCATAAATCC TTTTACTCTCCCTCCCCCCCCTCCCCTCATTTCCTCCCCTTACTATCTCT CTAGCCACTCCGTTTTCAATTTTCAAATAGCAAGATTCCAGAAATGAACA CTTTTTGTAACTGTTGTCTTTTTTTATACCTGGTGTCCCCTTATCCCCCG CCGAGAAAAGGTGTGGTAAGCTGCAGCCTCCGGTCATTAGCTTCACCGAT GTGGCGTTTTCGTACTCTGGGAAGAGGCAGGACTATCTCTTTTCCGGGCT GAACTTCGGGATAGACTCCGACTCGCGCATCGCTCTCGTGGGACCTAATG GGGCGGGGAAGTCAACGCTCCTCAAGGTGGCCGTTGGGGGGGGGGGAGAC AATATAGAGTACGAACGCTTGTGAACCTCGCTATCATTTGCCTTCTTTTT TTAAGTAAAAGATGAACGTTACCGATGTCTGTAGTTTCTAAATTGAAATC TTGCACCCTGTCTTGAAAACAGGAAAGTACTGTGGCCGTCTCTTTTTTCG TTCAAATGCCCTATAGACAAAAACTTGCACGTAAGGGCTAGTAGAAGAGG TTTTATAGCGTTTCTTGAGGCGTCGGCGATGTTTGCCCACTGTCTGTGAT TGCTTTTTCCTATTTATGGGAGTAAAGCCTTGCCAGGCAAAAGCAGACAC GCCACGCTCACCGCAGAAGCAGTGGGCTATGAGACTCTAGTCTGTTTTTG TTGGGAAGTTTTTTTAATCGGACGCCAGCTTGACCGGTGTTTTTTTTTAT TTATGTGTGTATCTTACTTGCGTCCTTCTCTTGGGGTCTGTATATCTCAC CTCACGTACGTGTGTTTGTGTCTTTGCCGGTATTAGTGTATTAATTTTTA GATGGATGGATGGGTGGATCAACCGAGAGTCTGTCATAACACCGTTACTT CGTTCGTTGTGCCGCTCATTCCCTCTCTCTTTCTCTCGCTCTATAAACAT GTGGGTTTCCAACTAATTTTGATGGTGCGGGGTTTTACTTCTCGCGTCCC CTCCCCCTCTCCACATCCCTCCGGCAGCTAATGGTGGGGCAGTTACATCC CGTGGAGGGTAATATCTCTAGACGGTCGGGATTGAGCATCGGGCGATATC ACCAGCATTCAGCCGAGGTGCTGGACTTTGACAAGTCGCCGGTCGACTAC TTGAAG
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Coding sequence (CDS) from alignment at F-distichus_contig10661:464..3669-

>mRNA_F-distichus_contig10661.565.1 ID=mRNA_F-distichus_contig10661.565.1|Name=mRNA_F-distichus_contig10661.565.1|organism=Fucus distichus monoicous|type=CDS|length=966bp|location=Sequence derived from alignment at F-distichus_contig10661:464..3669- (Fucus distichus monoicous)
ATGATAGTGATGCAGGAGCGGGAAATGAAGTACTGGGGTGGGAACTACGA
CATCTACAGGCGGACGCGCGAGGAACAGGACACGAACCAGATGATAGTGA
TGCAGGAGCGGGAAATGAAGTACTGGGGTGGGAACTACGACATCTACAGG
CGGACGCGCGAGGAACAGGACACGAACCAGGTGAAACTGTACAAGAAACA
GCAGGCGGAGATTCAGCACACGAAGCAGTTTATCGCCTCGTGCGGAACCT
TCTCTAACCTCGTGCGCCAGGCGAAGTCCCGCCAAAAGCAGGTGAAACTG
TACAAGAAACAGCAGGCGGAGATTCAGCACACGAAGCAGTTTATCGCCTC
GTGCGGAACCTTCTCTAACCTCGTGCGCCAGGCGAAGTCCCGCCAAAAGC
AGTTGGATAAGATGGAGGAGGCCGGTCTGCTCAAGATGCCCTTCTCGGAG
CCGCTTTGGATAAGATGGAGGAGGCCGGTCTGCTCAAGATGCCCTTCTCG
GAGCCGCTGCAGGACTATCTCTTTTCCGGGCTGAACTTCGGGATAGACTC
CGACTCGCGCATCGCTCTCGTGGGACCTAATGGGGCGGGGAAGTCAACGC
TCCTCAAGGCAGGACTATCTCTTTTCCGGGCTGAACTTCGGGATAGACTC
CGACTCGCGCATCGCTCTCGTGGGACCTAATGGGGCGGGGAAGTCAACGC
TCCTCAAGCTAATGGTGGGGCAGTTACATCCCGTGGAGGGTAATATCTCT
AGACGGTCGGGATTGAGCATCGGGCGATATCACCAGCATTCAGCCGAGGT
GCTGGACTTTGACAAGTCGCCGGTCGACTACTTGAAGCTAATGGTGGGGC
AGTTACATCCCGTGGAGGGTAATATCTCTAGACGGTCGGGATTGAGCATC
GGGCGATATCACCAGCATTCAGCCGAGGTGCTGGACTTTGACAAGTCGCC
GGTCGACTACTTGAAG
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