mRNA_F-distichus_contig10661.565.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: D8LIR7_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR7_ECTSI) HSP 1 Score: 305 bits (781), Expect = 4.890e-100 Identity = 153/170 (90.00%), Postives = 162/170 (95.29%), Query Frame = 1
Query: 1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPLQDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
DFLNGVCTN+IVMQ+R+MKYWGGNYD Y+RTREEQD NQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLL MP+S+ +DYLFSGL+FGIDSDSRIALVGPNGAGKSTLLKLMVGQL PVEGN+SRRSGLSIGRYHQHSAEVLD KSPVDYLK
Sbjct: 181 DFLNGVCTNIIVMQQRQMKYWGGNYDTYQRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLTMPYSKK-EDYLFSGLHFGIDSDSRIALVGPNGAGKSTLLKLMVGQLQPVEGNVSRRSGLSIGRYHQHSAEVLDLAKSPVDYLK 349
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A6H5J9L9_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9L9_9PHAE) HSP 1 Score: 300 bits (767), Expect = 1.750e-96 Identity = 155/199 (77.89%), Postives = 164/199 (82.41%), Query Frame = 1
Query: 1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
DFLNGVCTN+IVMQ+R+MKYWGGNYD Y+RTREEQD NQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLL MP+SEP+ +DYLFSGL+FGIDSDSRIALVGPNGAGKSTLLKLMVGQL PVEGN+SRRSGLSIGRYHQHSAEVLD KSPVDYLK
Sbjct: 273 DFLNGVCTNIIVMQQRQMKYWGGNYDTYQRTREEQDVNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLTMPYSEPMFQFKFPECGKLQPPVISFNDVAFSYSGKKEDYLFSGLHFGIDSDSRIALVGPNGAGKSTLLKLMVGQLQPVEGNVSRRSGLSIGRYHQHSAEVLDLAKSPVDYLK 471
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A835ZA40_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA40_9STRA) HSP 1 Score: 255 bits (651), Expect = 3.300e-79 Identity = 129/198 (65.15%), Postives = 148/198 (74.75%), Query Frame = 1
Query: 1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYL 507
DFLNGVCTNM+VMQER+++YWGGNYD Y TR EQDTNQ+K+YKKQQ EI HTK FIASCGT+SNL+RQ KSRQKQLDKM EAGL++ P+ EP +DYLF L FGID DSRIALVGPNGAGKSTLLKL+VG++ EG ISRRSG+S+GRYHQHSA+ LDFDKSPV+YL
Sbjct: 272 DFLNGVCTNMMVMQERQLRYWGGNYDAYVATRTEQDTNQLKMYKKQQEEIAHTKAFIASCGTYSNLIRQGKSRQKQLDKMVEAGLIQQPYEEPSFRFTFPDCGKLPPPVISFVDVAFSYSGKREDYLFRNLRFGIDCDSRIALVGPNGAGKSTLLKLIVGEIQACEGTISRRSGVSLGRYHQHSADQLDFDKSPVEYL 469
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A5J4Z7G4_PORPP (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7G4_PORPP) HSP 1 Score: 240 bits (613), Expect = 1.870e-73 Identity = 121/199 (60.80%), Postives = 150/199 (75.38%), Query Frame = 1
Query: 1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
DFL+GVCT+ +V+Q +++KYWGGNY Y++TREEQD NQ+KLYKKQQ EI+H KQFIASCGT++NLVRQAKSRQKQLDKM EAGLL+ P +P+ +DYL+S L+FGIDSDSRI+LVGPNGAGKSTLLKL+VG++ P EG++S +SG+ IGRYHQHS + LD D SPV+YLK
Sbjct: 285 DFLDGVCTDTMVLQRKKLKYWGGNYSQYQKTREEQDVNQMKLYKKQQDEIKHIKQFIASCGTYANLVRQAKSRQKQLDKMVEAGLLEPPVEDPIFRFKFPSPGKMAPPLVSFRDVAFSYSGKKEDYLYSDLSFGIDSDSRISLVGPNGAGKSTLLKLVVGEIQPCEGDVSLKSGVRIGRYHQHSNDQLDLDVSPVEYLK 483
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A2V3IUK5_9FLOR (Probable ATP-dependent transporter ycf16 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3IUK5_9FLOR) HSP 1 Score: 238 bits (608), Expect = 1.160e-72 Identity = 119/199 (59.80%), Postives = 150/199 (75.38%), Query Frame = 1
Query: 1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
DFL+GVCT+ +VMQ++++KYWGGNY Y RTREEQDTN++KLYKKQQ EI+H KQFIASCGT++NLVRQAKSRQKQLDKM EAGLL+ P++EP +DYL+S L+FGID +SR++LVGPNGAGKSTLL LM+ +L P EG +S +SGL +GRYHQHSA+ LDF+ SPV+Y++
Sbjct: 292 DFLDGVCTDTMVMQQQKLKYWGGNYSTYVRTREEQDTNKLKLYKKQQEEIKHIKQFIASCGTYANLVRQAKSRQKQLDKMVEAGLLEPPYAEPRFKFSFLGCGTLAPPLISFSDVAFSYSGKKEDYLYSNLSFGIDGESRVSLVGPNGAGKSTLLNLMLQELGPCEGTVSHKSGLRVGRYHQHSADQLDFNLSPVEYVR 490
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A7S3HE41_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HE41_9STRA) HSP 1 Score: 237 bits (605), Expect = 2.850e-72 Identity = 120/198 (60.61%), Postives = 143/198 (72.22%), Query Frame = 1
Query: 1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYL 507
DFLN VCT+M+VMQE++++YW GNYD Y TR EQ+TNQ+KLYKKQQ EIQ KQFI+SCGT++NLVRQAKSRQK LDKME GLL MP+ EP+ +DYLF ++FGI SRI LVGPNGAGKSTL+KL+ G+ P EG +S RSGLSIGR+HQHSAE+LDFDKSPVDY+
Sbjct: 281 DFLNAVCTDMMVMQEQKLRYWSGNYDSYLNTRREQETNQIKLYKKQQGEIQEIKQFISSCGTYANLVRQAKSRQKILDKMEADGLLTMPYEEPMFRFKFADAGAMAPPLISFSEVAFSYSGLKKDYLFKNISFGIHPKSRIVLVGPNGAGKSTLIKLICGENGPTEGTVSTRSGLSIGRFHQHSAEILDFDKSPVDYI 478
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A482SRX1_9ARCH (ABC-F family ATP-binding cassette domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRX1_9ARCH) HSP 1 Score: 226 bits (575), Expect = 5.640e-69 Identity = 115/198 (58.08%), Postives = 144/198 (72.73%), Query Frame = 1
Query: 1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYL 507
DFLNGVCT+ +VMQ+++++YW GNYD Y +TR EQD+NQ+KLYKKQQ EI KQFI+SCGT++NLV+QAKSRQK LDKMEE GL+++PF EP+ +DYLF ++FGI +SRI LVGPNGAGKSTLLKL+ G+ P EG +S R GLSIGR+HQHSAEVLD +KSPV+Y+
Sbjct: 199 DFLNGVCTHTMVMQQQKLRYWTGNYDAYIKTRGEQDSNQLKLYKKQQQEIADIKQFISSCGTYANLVKQAKSRQKILDKMEEEGLIQVPFEEPMFRFKFADAGELSPPLISFSEVAFSYSGQKKDYLFKDVSFGIHPNSRIVLVGPNGAGKSTLLKLICGENAPTEGTVSIRGGLSIGRFHQHSAEVLDLNKSPVEYI 396
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A1X6NW09_PORUM (Probable ATP-dependent transporter ycf16 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NW09_PORUM) HSP 1 Score: 228 bits (581), Expect = 1.500e-68 Identity = 115/199 (57.79%), Postives = 143/199 (71.86%), Query Frame = 1
Query: 1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
DFL+GVCT+ +VMQER++KYWGGNY Y RTR+EQD NQ+KLYKKQQ EI+HTK FI+SCGT+SNLVRQAKSRQKQLDKM EAGLLK PF + DYL+ +FGID DSR+ +VGPNGAGK+TL+ LM+ +L PVEG++S RSGL + ++HQHSA+ LD + SPV+YL+
Sbjct: 307 DFLDGVCTDTMVMQERQLKYWGGNYSTYVRTRKEQDVNQLKLYKKQQEEIKHTKDFISSCGTYSNLVRQAKSRQKQLDKMVEAGLLKPPFQDTQFKFRFPETSAMAPPCISFTDVAFSYSGKKADYLYKDQSFGIDCDSRVCIVGPNGAGKTTLINLMLHKLTPVEGSVSHRSGLKVAQFHQHSADQLDLEVSPVEYLR 505
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A7S1DUN0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DUN0_HEMAN) HSP 1 Score: 218 bits (554), Expect = 3.320e-67 Identity = 113/199 (56.78%), Postives = 141/199 (70.85%), Query Frame = 1
Query: 1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGL-----------LKMP------------------FSEPLQDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
DFLNGVC+N++V+Q ++KYW GNY+ Y +TR EQ+TNQ+KLY KQQ EI+H K+FIASCGTF+NLVRQAKSRQK LDKMEEAGL LK P +S +DYL+ GLN G+DSDSRIAL+GPNGAGKSTL+KLM +L P EG + RR GL IGR+ QHS + L+ + SPV+Y++
Sbjct: 32 DFLNGVCSNIMVLQRSKLKYWAGNYEQYVKTRTEQETNQMKLYAKQQEEIKHAKEFIASCGTFANLVRQAKSRQKMLDKMEEAGLIEPVHQEKKLVLKFPECGRLVPPLIALNDVAFSYSGKKKDYLYKGLNIGVDSDSRIALLGPNGAGKSTLVKLMCAELMPTEGTVQRRPGLKIGRFSQHSNDQLEPELSPVEYIQ 230
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Match: A0A0S4JUD9_BODSA (ABC transporter, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JUD9_BODSA) HSP 1 Score: 218 bits (554), Expect = 1.320e-65 Identity = 110/199 (55.28%), Postives = 142/199 (71.36%), Query Frame = 1
Query: 1 DFLNGVCTNMIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASCGTFSNLVRQAKSRQKQLDKMEEAGLLKMPFSEPL-----------------------------QDYLFSGLNFGIDSDSRIALVGPNGAGKSTLLKLMVGQLHPVEGNISRRSGLSIGRYHQHSAEVLDFDKSPVDYLK 510
DFLNGVCT+++VM ++++K W GNYD Y +T+ E +TNQ+K YKKQQ +IQ K+FIASCGTF+NLV+QA+SRQK LDKME AGL+KMPF EP+ +DYLF ++FGI SRIALVGPNGAGKSTL+KL+ G+ P EG ++R L+IGR+HQHSAEVLD DK+PV+Y++
Sbjct: 272 DFLNGVCTDILVMSQKKLKAWTGNYDTYIKTKSEVETNQIKAYKKQQEDIQDIKKFIASCGTFANLVKQAQSRQKILDKMEAAGLIKMPFVEPIFRFRFHEGGAINGVLVSASGSAFSYTGKKEDYLFKNVDFGIWPTSRIALVGPNGAGKSTLIKLICGENEPCEGTMTRAGSLTIGRFHQHSAEVLDLDKTPVEYIE 470 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10661.565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10661.565.1 >prot_F-distichus_contig10661.565.1 ID=prot_F-distichus_contig10661.565.1|Name=mRNA_F-distichus_contig10661.565.1|organism=Fucus distichus monoicous|type=polypeptide|length=161bp MIVMQEREMKYWGGNYDIYRRTREEQDTNQVKLYKKQQAEIQHTKQFIASback to top mRNA from alignment at F-distichus_contig10661:464..3669- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10661.565.1 ID=mRNA_F-distichus_contig10661.565.1|Name=mRNA_F-distichus_contig10661.565.1|organism=Fucus distichus monoicous|type=mRNA|length=3206bp|location=Sequence derived from alignment at F-distichus_contig10661:464..3669- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10661:464..3669- >mRNA_F-distichus_contig10661.565.1 ID=mRNA_F-distichus_contig10661.565.1|Name=mRNA_F-distichus_contig10661.565.1|organism=Fucus distichus monoicous|type=CDS|length=966bp|location=Sequence derived from alignment at F-distichus_contig10661:464..3669- (Fucus distichus monoicous)back to top |