mRNA_F-distichus_contig10582.492.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10582.492.1 vs. uniprot
Match: A0A6H5JK39_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK39_9PHAE) HSP 1 Score: 549 bits (1414), Expect = 1.650e-185 Identity = 323/435 (74.25%), Postives = 343/435 (78.85%), Query Frame = 3
Query: 267 MHTRRNTVAPENTGFGTGSAMNENAPACAKPSDLGSKGG--GLGGAGKKGLGGVQTRRGLRDITNKSEETGGQAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLALTTASGTAXTSTVTAKTVPGA-ASAPL-RPIRTATRTPTDIDQRDADEPLAVTEYVEDLYQFLRERETSTRVDRSYMDDQPNVNERMRAILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLESEEVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALGFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSMIACCAIYVARKNMGRTCWSPTLEKYTKYQVEDLMPCLEEISRVLNLEGGDLEAVKKKFSSSKFGSVATMEISVLPDD 1559
MHTRRNT EN GFG M+ENA KPSDLG+ G LGG KKGLGGVQTRRGLRDITNK+EE + G XXXXXXXXXXXXXX + TA P A +SAP RPIRTA+RTPTDIDQRDADEPLAVTEYVEDLY FLRERE +T+VDR YMD QPNVNERMR+ILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLE E VTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMA+AL FRLTVPTIYCFLLRYLKAAHADKKIVQLSC+VAERMLQEV+MLD+LPS++ACCAIYVARKNMGRTCWSPTLEKYTKY+VEDLMPCL EISRVL EGGDLEAVKKKFSSSKFGSVATM++S+LPDD
Sbjct: 1 MHTRRNTAVQENAGFG----MDENA----KPSDLGAAAGKAALGGGAKKGLGGVQTRRGLRDITNKAEEAVAEGAGKGGKKPGARVASASVGSADTGAAAPVVPSAASLXXXXXXXXXXXXXX----------------TQTTAPAAPAAISSAPASRPIRTASRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMASALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVSMLDYLPSVVACCAIYVARKNMGRTCWSPTLEKYTKYRVEDLMPCLCEISRVLKQEGGDLEAVKKKFSSSKFGSVATMKVSILPDD 411
BLAST of mRNA_F-distichus_contig10582.492.1 vs. uniprot
Match: A0A836CKN2_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN2_9STRA) HSP 1 Score: 350 bits (897), Expect = 1.280e-108 Identity = 177/272 (65.07%), Postives = 220/272 (80.88%), Query Frame = 3
Query: 747 RTPTDIDQRDADEPLAVTEYVEDLYQFLRERETSTRVDRSYMDDQPNVNERMRAILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLE-SEEVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALGFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSMIACCAIYVARKNMGRTCWSPTLEKYTKYQVEDLMPCLEEISRVLNLEGGDLEAVKKKFSSSKFGSVATMEISVLPDD 1559
R+ DID+RD EPLAVTEYVEDLY +LR +E TR+ + ++DQ +V+ RM AIL+DWLVEVHL+F+LVPDTLYLTVY+I +YL + VTR NLQLVGVTA+LLASKYEEIYPP+IRDLV++TD+AY ++QIL+ME+ M N L FR+TVPT YCFLLRYLKAAHAD++IVQLSC+VAERMLQE ML HLPS+ AC AIY+AR+N+GR WSPTLEKYT Y DL CL + ++ GDL+AV+ KF+S +FG+VATM+I + DD
Sbjct: 119 RSANDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDTCELM-AACGDLKAVRSKFTSKQFGAVATMDIDLSCDD 389
BLAST of mRNA_F-distichus_contig10582.492.1 vs. uniprot
Match: F0XYQ7_AURAN (Cyclin N-terminal domain-containing protein (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XYQ7_AURAN) HSP 1 Score: 323 bits (828), Expect = 1.860e-100 Identity = 159/263 (60.46%), Postives = 203/263 (77.19%), Query Frame = 3
Query: 759 DIDQRDADEPLAVTEYVEDL----YQFLRERETSTRVDRSYMDDQPNVNERMRAILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLESEEVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALGFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSMIACCAIYVARKNMGRTCWSPTLEKYTKYQVEDLMPCLEEISRVLNLEGGDLEAVKKKFSSSKFGSVATM 1535
D+D RDA P AVTEYV D+ Y RE+E T V+ +YM Q ++NE+MRAILIDWLVEVHLKFKLVP+TLYLTV LID+YL V R NLQLVGV+A+LLASKYEEIYPP+++DLV+ITD+AY ++QIL ME M AL +++T+ +I+CF++RYLKA HAD+++V L+ +VAERMLQE ML +LPSM+A CA+Y+ARKN+GR WSPTL Y +Y L CLEE+S V++ G L+AVKKK+SS K+G VA M
Sbjct: 1 DVDARDASNPQAVTEYVNDMRAPAYAHFREKELETSVNPTYMSRQAHINEKMRAILIDWLVEVHLKFKLVPETLYLTVNLIDRYLLGSPVERSNLQLVGVSALLLASKYEEIYPPELKDLVYITDKAYTQEQILSMEEKMVKALKYKMTIASIHCFMMRYLKAGHADRRMVWLASYVAERMLQEYAMLKYLPSMVAACAVYIARKNLGRNAWSPTLLHYAQYTESSLRACLEEMSSVIHSTKGSLQAVKKKYSSEKYGQVALM 263
BLAST of mRNA_F-distichus_contig10582.492.1 vs. uniprot
Match: B8BZ02_THAPS (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ02_THAPS) HSP 1 Score: 312 bits (799), Expect = 6.080e-96 Identity = 149/264 (56.44%), Postives = 202/264 (76.52%), Query Frame = 3
Query: 753 PTDIDQRDADEPLAVTEYVEDLYQFLRERETSTRVDRSYMDDQPNVNERMRAILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLESEEVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALGFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSMIACCAIYVARKNMGRTCWSPTLEKYTKYQVEDLMPCLEEISRVLNLEGGDLEAVKKKFSSSKFGSVATMEIS 1544
P DID+RD+D+PL T YV+D+Y+ R +E T V YM+DQ +NERMR+IL+DWLVEVHLKFKLVP+TLYLTV +ID+YL EV+R LQLVGVTA+L+ASKYEEIYPP++RDLV+I DRAY++++ILEME + +L +++T+P+ + FL+RYLKAAHADKKIVQLSCF+ + LQ ML +LPS +A A+++AR+ +GR WSPTL KY +Y+ ED+MP + + +L AV KK++SS++G VA + IS
Sbjct: 15 PDDIDERDSDDPLCATSYVQDMYEHFRGKEVFTSVRPVYMEDQQFINERMRSILVDWLVEVHLKFKLVPETLYLTVNVIDRYLAKTEVSRPKLQLVGVTALLIASKYEEIYPPELRDLVYICDRAYSKNEILEMEEIILKSLEYQITIPSAHAFLVRYLKAAHADKKIVQLSCFILDGTLQSYNMLHYLPSQLAAAAVFIARRTVGRNAWSPTLLKYAQYREEDIMPVARAVLAEKSSSSTELRAVNKKYTSSRYGGVANISIS 278
BLAST of mRNA_F-distichus_contig10582.492.1 vs. uniprot
Match: A0A1E7FEB9_9STRA (Cyclin_N-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEB9_9STRA) HSP 1 Score: 308 bits (790), Expect = 8.660e-95 Identity = 145/262 (55.34%), Postives = 203/262 (77.48%), Query Frame = 3
Query: 759 DIDQRDADEPLAVTEYVEDLYQFLRERETSTRVDRSYMDDQPNVNERMRAILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLESEEVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALGFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSMIACCAIYVARKNMGRTCWSPTLEKYTKYQVEDLMPCLEEISRVLNLEGGDLEAVKKKFSSSKFGSVATMEIS 1544
+ID+RDA++PL TEYV+D+Y+ R +E ST V YMD+Q ++NERMR+IL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE +EV+R LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY R +I+EME + L + +T+P+ + FL+R+LKAAHADK+IVQLSC++ + LQ +L +LPS +A A+++AR+ +GR WSPTL KY KY+ ED+MP + + +L AV KK++SS++G VA++ +S
Sbjct: 6 NIDERDAEDPLCATEYVQDMYEHFRLKEGSTSVRPLYMDNQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRTEIIEMEEKILKTLEYNITIPSAHAFLVRFLKAAHADKRIVQLSCYILDGTLQSYNLLHYLPSQLAAAAVFIARRTVGRNSWSPTLLKYAKYREEDIMPIAKAVMNEKANAAQELRAVNKKYTSSRYGGVASLTLS 267
BLAST of mRNA_F-distichus_contig10582.492.1 vs. uniprot
Match: A0A7S2PNA7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PNA7_9STRA) HSP 1 Score: 304 bits (779), Expect = 3.170e-91 Identity = 150/268 (55.97%), Postives = 198/268 (73.88%), Query Frame = 3
Query: 759 DIDQRDADEPLAVTEYVEDLYQFLRERETSTRVDRSYMDDQPNVNERMRAILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLESEEVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALGFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSMIACCAIYVARKNMGRTCWSPTLEKYTKYQVEDLMPCLEEISRVLNLEGGDLEAVKKKFSSSKFGSVATMEISVLPDDL 1562
DID+RD D+PL VT YV+D+Y+ R +E ST V YM+DQ +NERMR+IL+DWLVEVHLKFKLVP+TLYLTV +ID+YL EVTR LQLVGVTA+L+ASKYEEIYPP++RDLV+I DRAY++++ILEME + L +++T+P+ + FL+RYLKAAHADKKIVQLSC++ + LQ ML +LPS +A +I +AR+ +GR WSPTL KY +Y ED+ P + +L AV KK++SS++G VA + LP D
Sbjct: 145 DIDERDTDDPLCVTSYVQDMYEHFRTKEGSTSVRPVYMEDQQYINERMRSILVDWLVEVHLKFKLVPETLYLTVNIIDRYLAKTEVTRPKLQLVGVTALLIASKYEEIYPPELRDLVYICDRAYSKNEILEMEEVVLKKLQYQITIPSAHAFLVRYLKAAHADKKIVQLSCYILDGTLQSYNMLHYLPSQLAAASICIARRTVGRNSWSPTLLKYAQYCEEDIKPVARAVLAEKASASTELRAVNKKYTSSRYGGVANLP---LPTDF 409
BLAST of mRNA_F-distichus_contig10582.492.1 vs. uniprot
Match: A0A7S4AAP4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AAP4_9STRA) HSP 1 Score: 302 bits (774), Expect = 7.510e-91 Identity = 141/261 (54.02%), Postives = 200/261 (76.63%), Query Frame = 3
Query: 759 DIDQRDADEPLAVTEYVEDLYQFLRERETSTRVDRSYMDDQPNVNERMRAILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLESEEVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALGFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSMIACCAIYVARKNMGRTCWSPTLEKYTKYQVEDLMPCLEEISRVLNLEGGDLEAVKKKFSSSKFGSVATMEI 1541
+ID+RDA++PL TEYV+D+Y RE+E T V YM++Q ++NERMR+IL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE +EV+R LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY R +I+EME + L + +T+P+ + FL+RYLKAAHADK+IVQLSCF+ + LQ +L +LPS +A A+++AR+ +GR WSPTL +Y Y+ E++ P + + + +L AV KK++SS++G+VA + +
Sbjct: 119 NIDERDAEDPLCATEYVQDMYDHFREKEAITSVRPLYMENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRKEIIEMEEQILKTLEYNITIPSAHAFLVRYLKAAHADKRIVQLSCFILDGTLQSYNLLHYLPSQLAAAAVFIARRTVGRNSWSPTLLRYAVYREEEIAPVAKAVMAEKSSAAHELRAVNKKYTSSRYGAVANLAL 379
BLAST of mRNA_F-distichus_contig10582.492.1 vs. uniprot
Match: A0A448ZSV9_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSV9_9STRA) HSP 1 Score: 298 bits (764), Expect = 2.340e-89 Identity = 140/262 (53.44%), Postives = 199/262 (75.95%), Query Frame = 3
Query: 759 DIDQRDADEPLAVTEYVEDLYQFLRERETSTRVDRSYMDDQPNVNERMRAILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLESEEVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALGFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSMIACCAIYVARKNMGRTCWSPTLEKYTKYQVEDLMPCLEEISRVLNLEGGDLEAVKKKFSSSKFGSVATMEIS 1544
+ID+RDA++PL TEYV+D+Y R +E T V YM++Q ++NERMR+IL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE +EV+R LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY R +I+EME + L + +T+P+ + FL+R+LKAAHADK+IVQLSCF+ + LQ +L +LPS +A A+++AR+ +GR WSPTL +Y Y+ E++ P + + +L AV KK++SS++G+VA + +S
Sbjct: 122 NIDERDAEDPLCATEYVQDMYDHFRAKEGITSVRPLYMENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRKEIIEMEEQILKTLEYNITIPSAHAFLVRFLKAAHADKRIVQLSCFILDGTLQSYNLLHYLPSQLAAAAVFIARRTVGRNSWSPTLLRYAIYREEEIAPIARAVMAEKSSAAHELRAVNKKYTSSRYGAVANLALS 383
BLAST of mRNA_F-distichus_contig10582.492.1 vs. uniprot
Match: A0A7S3Q0F9_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0F9_9STRA) HSP 1 Score: 297 bits (760), Expect = 4.320e-89 Identity = 144/262 (54.96%), Postives = 194/262 (74.05%), Query Frame = 3
Query: 744 TRTPTDIDQRDADEPLAVTEYVEDLYQFLRERETSTRVDRSYMDDQPNVNERMRAILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLESEEVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALGFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSMIACCAIYVARKNMGRTCWSPTLEKYTKYQVEDLMPCLEEISRVLNLEGGDLEAVKKKFSSSKFGSVA 1529
T T DID+RD ++PL VT YV+D+Y+ ++E ST V YM+DQ N+NERMR+IL+DWLVEVHLKFKLVP+TLYLT+ LID++LE E+++R LQLVGVT++L+ASKYEEIYPP++RDLV+I D AY+++ ILEME M L +R+T+P+ + FL+RYLKAAHAD+KIVQLSC++ + LQ +L LPS +A ++ +ARK +GR WSPTL KY Y ED+ P I +L AV KK+ S ++G+VA
Sbjct: 94 TGTVDDIDERDKNDPLCVTSYVQDMYEHFADKEQSTSVRPVYMEDQSNINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRFLEKEDISRPKLQLVGVTSLLIASKYEEIYPPELRDLVYICDHAYSKELILEMEYKMLTTLEYRITIPSAHAFLVRYLKAAHADRKIVQLSCYILDGTLQSYNLLHFLPSQLAAASVLIARKAVGRNAWSPTLLKYATYCEEDITPVARAILAEKTSSTQELRAVNKKYQSQRYGAVA 355
BLAST of mRNA_F-distichus_contig10582.492.1 vs. uniprot
Match: A0A6V2LUR7_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2LUR7_9STRA) HSP 1 Score: 297 bits (761), Expect = 4.510e-89 Identity = 142/261 (54.41%), Postives = 197/261 (75.48%), Query Frame = 3
Query: 759 DIDQRDADEPLAVTEYVEDLYQFLRERETSTRVDRSYMDDQPNVNERMRAILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLESEEVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALGFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSMIACCAIYVARKNMGRTCWSPTLEKYTKYQVEDLMPCLEEISRVLNLEGGDLEAVKKKFSSSKFGSVATMEI 1541
+ID+RD D+PL VT+YV+D+Y+ RERE T V YM+ Q ++NERMR+IL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE EV+R LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY++ +IL+ME + L +++T+P+ + FL+RYLKAAHADKKIVQLSC++ + LQ +L +LPS +A A+++AR+ +GR WSPTL +Y Y E+++P + +L AV KK++SS++G VA I
Sbjct: 111 NIDERDRDDPLCVTDYVQDMYEHFREREIHTSVRPIYMEGQQHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLEKREVSRPKLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYSKQEILDMEEVILKTLEYQITIPSAHAFLVRYLKAAHADKKIVQLSCYILDGTLQSYNLLHYLPSQLAAAAVFIARRVVGRNSWSPTLLQYAGYCEEEVIPVARAVLAEKASTSPELRAVNKKYTSSRYGGVANTVI 371 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10582.492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10582.492.1 >prot_F-distichus_contig10582.492.1 ID=prot_F-distichus_contig10582.492.1|Name=mRNA_F-distichus_contig10582.492.1|organism=Fucus distichus monoicous|type=polypeptide|length=434bp MHTRRNTVAPENTGFGTGSAMNENAPACAKPSDLGSKGGGLGGAGKKGLGback to top mRNA from alignment at F-distichus_contig10582:1872..7948+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10582.492.1 ID=mRNA_F-distichus_contig10582.492.1|Name=mRNA_F-distichus_contig10582.492.1|organism=Fucus distichus monoicous|type=mRNA|length=6077bp|location=Sequence derived from alignment at F-distichus_contig10582:1872..7948+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10582:1872..7948+ >mRNA_F-distichus_contig10582.492.1 ID=mRNA_F-distichus_contig10582.492.1|Name=mRNA_F-distichus_contig10582.492.1|organism=Fucus distichus monoicous|type=CDS|length=2604bp|location=Sequence derived from alignment at F-distichus_contig10582:1872..7948+ (Fucus distichus monoicous)back to top |