mRNA_F-distichus_contig105802.489.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig105802.489.1 vs. uniprot
Match: A0A6H5LBY7_9PHAE (Fe/B12 periplasmic-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBY7_9PHAE) HSP 1 Score: 305 bits (782), Expect = 1.530e-100 Identity = 157/227 (69.16%), Postives = 176/227 (77.53%), Query Frame = 1
Query: 1 SVAEVIDSVRLVGRETGFAQEGEAEAQRLETGFAKIRAVVTKNAQGEAALAPAPSGSAGDIRTDGKNG------GQVHGVGKHKKKVAFLEWLEPLFNGGHWIPDMVRAAGGEYTMAEPGNKSVGVTPEELSAYDADIILVAPCGMDRKRAVSDGKNMWRHEWWRNLRAVREGEVYGLDGNAYYARPGPRLLQGSGIIARLLNGDAVGDEIGEEISPRDSWTAIADP 663
SVAEVIDSVRLVGRETGFA+EG AEA+RLE GF KIR+VV K E+ LA A G G V K K+KVAFLEWLEPLFNGGHW+PD+VRAAGGEYTMAEPGNKS+G++ +EL YDADIILVAPCGMDR RA SDG+ MWRH+WWR LRAV++G+VY LDGNAYYARPGPRLLQG GIIARLL+GDA GD IGE+I+PRDSW I P
Sbjct: 135 SVAEVIDSVRLVGRETGFAEEGIAEARRLEAGFDKIRSVVAKL---ESTLATAXXXXXXXXXXXXXXGVVGVAPGGASSVPK-KQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTMAEPGNKSMGMSAKELMDYDADIILVAPCGMDRNRAKSDGEQMWRHDWWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIARLLHGDAAGDAIGEDIAPRDSWFIITAP 357
BLAST of mRNA_F-distichus_contig105802.489.1 vs. uniprot
Match: A0A835YMX1_9STRA (Periplasmic binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMX1_9STRA) HSP 1 Score: 204 bits (518), Expect = 3.460e-61 Identity = 105/220 (47.73%), Postives = 141/220 (64.09%), Query Frame = 1
Query: 4 VAEVIDSVRLVGRETGFAQEGEAEAQRLETGFAKIRAVVTKNAQGEAALAPAPSGSAGDIRTDGKNGGQVHGVGKHKKKVAFLEWLEPLFNGGHWIPDMVRAAGGEYTMAEPGNKSVGVTPEELSAYDADIILVAPCGMDRKRAVSDGKNMWRHEWWRNLRAVREGEVYGLDGNAYYARPGPRLLQGSGIIARLLNGDAVGDEIGEEISPRDSWTAIADP 663
+++VI SVR VGRE G +E + A+ LE GF KI+A V P P S+ ++R D N L +PLFNGGHW+PD++ AG +Y +A+ +S+ +TPE L+A D DIILVAPCG D RA D +++W+H+WW LRAVR+G+VY +DGNAYYARPGPRLLQG GIIARL++G +VG +GEE++PR W + P
Sbjct: 132 LSDVIASVRTVGRECGAEEEADEVARGLEAGFEKIKAAVKG--------LPRPKPSSCNVR-DSCN----------------LLLADPLFNGGHWVPDLLDIAGADYRLAKTKERSIQITPETLAASDPDIILVAPCGFDSTRAHDDAQHLWQHDWWTQLRAVRDGKVYAMDGNAYYARPGPRLLQGCGIIARLIHGKSVGQTLGEELAPR-HWKQVQAP 325
BLAST of mRNA_F-distichus_contig105802.489.1 vs. uniprot
Match: A0A7S4KA17_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KA17_9STRA) HSP 1 Score: 162 bits (409), Expect = 8.640e-43 Identity = 73/146 (50.00%), Postives = 98/146 (67.12%), Query Frame = 1
Query: 223 GKHKKKVAFLEWLEPLFNGGHWIPDMVRAAGGEYTM-AEPGNKSVGVTPEELSAYDADIILVAPCGMDRKRAVSDGKNMWRHE-WWRNLRAVREGEVYGLDGNAYYARPGPRLLQGSGIIARLLNGDAVGDEIGEEISPRDSWTAI 654
G+ + +VAFLEW +P+F GGHWIPDM+ AG EY + G +SVGV E +D D IL+ PCG +R V D + R + WW+ + AVREG VY LDGN+YYARPGPRLLQG+GI+A ++G+ E+GEE+ P + + I
Sbjct: 220 GRPRPRVAFLEWHDPIFAGGHWIPDMLDMAGAEYVFPVKSGERSVGVADEHFVEFDPDFILIGPCGFGLERTVKDTLQLARTKPWWKEMSAVREGNVYALDGNSYYARPGPRLLQGTGIMAACIHGEETAKELGEELCPTEGYCQI 365
BLAST of mRNA_F-distichus_contig105802.489.1 vs. uniprot
Match: A0A812QZJ7_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QZJ7_SYMMI) HSP 1 Score: 143 bits (360), Expect = 3.470e-39 Identity = 61/123 (49.59%), Postives = 81/123 (65.85%), Query Frame = 1
Query: 238 KVAFLEWLEPLFNGGHWIPDMVRAAGGEYTMAEPGNKSVGVTPEELSAYDADIILVAPCGMDRKRAVSDGKNMWRHEWWRNLRAVREGEVYGLDGNAYYARPGPRLLQGSGIIARLLNGDAVG 606
+ LEW +PLF+GGHWIP+M+ AAG E PGNKS + P L+ YD D ILVA CG D R + D + +W WW +LR V+EG+V+ DGN Y+ARPGP L+ G I+AR+++ D G
Sbjct: 30 RCVLLEWADPLFDGGHWIPEMLVAAGSEEGWQSPGNKSKKIEPSVLTDYDPDCILVACCGFDLHRNLEDAQKLWSKPWWTSLRCVKEGKVFAADGNRYFARPGPSLVAGVAIMARIIHDDVPG 152
BLAST of mRNA_F-distichus_contig105802.489.1 vs. uniprot
Match: A0A7S2T5Q4_9CHLO (Hypothetical protein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2T5Q4_9CHLO) HSP 1 Score: 145 bits (365), Expect = 1.670e-38 Identity = 65/131 (49.62%), Postives = 85/131 (64.89%), Query Frame = 1
Query: 226 KHKKKVAFLEWLEPLFNGGHWIPDMVRAAGGEYTMAEPGNKSVGVTPEELSAYDADIILVAPCGMDRKRAVSDGKNMW------RHEWWRNLRAVREGEVYGLDGNAYYARPGPRLLQGSGIIARLLNGDA 600
+ + KVA LEW +PLF GGHWI +MV AGG Y + PG +S +T +L+AYD D+I++APCG D R D K + EWW LRAVRE EVY DGN Y++RP PRL++G I+A +L+G A
Sbjct: 186 RRRPKVALLEWFDPLFTGGHWIHEMVEDAGGSYGLTRPGERSAVMTRSDLAAYDPDVIVLAPCGFDLDRCERDAKKILYDPEGEHFEWWSGLRAVRESEVYACDGNQYFSRPSPRLVEGIEILAEVLHGVA 316
BLAST of mRNA_F-distichus_contig105802.489.1 vs. uniprot
Match: A0A7S4V8M0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V8M0_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.090e-37 Identity = 67/146 (45.89%), Postives = 95/146 (65.07%), Query Frame = 1
Query: 223 GKHKKKVAFLEWLEPLFNGGHWIPDMVRAAGGEYTM-AEPGNKSVGVTPEELSAYDADIILVAPCGMDRKRAVSDGKNMW-RHEWWRNLRAVREGEVYGLDGNAYYARPGPRLLQGSGIIARLLNGDAVGDEIGEEISPRDSWTAI 654
G K +VAF+EW +P+F GGHWI DM+ A G+Y M E +S+ ++ E+ D D+IL+ PCG D R V D ++ +WW NLRAV+EG V+ D N+YYARPGPRLLQG+GI+A ++GD + D + E++ P + I
Sbjct: 193 GCKKPRVAFIEWHDPIFCGGHWIVDMLDIARGDYVMPVEYAGRSIAMSNEDFIKLDPDVILIGPCGFDLARTVKDTIEIFGTKDWWLNLRAVKEGRVFAADANSYYARPGPRLLQGTGIMAAAMHGDNIMDSLDEDLVPASGYCQI 338
BLAST of mRNA_F-distichus_contig105802.489.1 vs. uniprot
Match: A0A7R9WK88_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WK88_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.040e-36 Identity = 62/121 (51.24%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 232 KKKVAFLEWLEPLFNGGHWIPDMVRAAGGEYTMAEPGNKSVGVTPEELSAYDADIILVAPCGMDRKRAVSDGKNMWRHE----WWRNLRAVREGEVYGLDGNAYYARPGPRLLQGSGIIAR 582
K KVAFLEW EP GGHWI DM+ AGG YT+ + G +S +T E+L Y+ D+IL+ PCG +RA +D + H W+NLRAV++ +V+ LDGN+YYARPGPRL+QG+G++A+
Sbjct: 172 KPKVAFLEWHEPFVTGGHWIADMMEIAGGRYTLNKTGCRSECITDEQLVQYNPDVILIGPCGFSVERATNDTLPLLNHSKRGPLWKNLRAVQDEKVFALDGNSYYARPGPRLVQGTGLMAK 292
BLAST of mRNA_F-distichus_contig105802.489.1 vs. uniprot
Match: A0A1Q7QJV2_9CHLR (Fe/B12 periplasmic-binding domain-containing protein n=5 Tax=unclassified Chloroflexi TaxID=189774 RepID=A0A1Q7QJV2_9CHLR) HSP 1 Score: 135 bits (339), Expect = 3.510e-35 Identity = 56/127 (44.09%), Postives = 84/127 (66.14%), Query Frame = 1
Query: 208 QVHGVGKHKKKVAFLEWLEPLFNGGHWIPDMVRAAGGEYTMAEPGNKSVGVTPEELSAYDADIILVAPCGMDRKRAVSDGKNMWRHEWWRNLRAVREGEVYGLDGNAYYARPGPRLLQGSGIIARLL 588
+ G+ + +VA LEWL+PLFNGGHW+P+ V AGG + PG +S + E+ A D++++ PCG D +RA SDG+ + R W + AVR G V+ +DGNA+++RPGPRL+ G+ ++ARL
Sbjct: 153 RTRSAGRSRPRVACLEWLDPLFNGGHWVPEQVEIAGGTDVLGSPGERSREIAWAEVVAASPDVLVLMPCGFDERRAASDGQRLRRLPGWDEVPAVRAGRVHPVDGNAFFSRPGPRLVDGAELLARLF 279
BLAST of mRNA_F-distichus_contig105802.489.1 vs. uniprot
Match: A0A3C0XP01_9CHLR (Cobalamin-binding protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3C0XP01_9CHLR) HSP 1 Score: 129 bits (323), Expect = 1.450e-32 Identity = 59/133 (44.36%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 220 VGKHKKKVAFLEWLEPLFNGGHWIPDMVRAAGGEYTMAEPGNKSVGVTPEELSAYDADIILVAPCGMDRKRAVSDGKNMWRHEWWRNLRAVREGEVYGLDGNAYYARPGPRLLQGSGIIARLLNGDAVGDEIG 618
G + V LEWL PLFN GHW+P+ V AGGE + P S+ V ++L A D + + + PCG D RAV + + W+ LRAVR+G VY LDGNAY++RPGPR++ G ++A LL+ D V +G
Sbjct: 159 AGAGRPTVVCLEWLAPLFNAGHWVPEQVAIAGGEDLLGRPLVPSIDVLWDDLVAADPEFLFLLPCGFDADRAVVEAAAVTARPEWQRLRAVRDGNVYALDGNAYFSRPGPRVVDGIELLASLLHPDRVSAPVG 291
BLAST of mRNA_F-distichus_contig105802.489.1 vs. uniprot
Match: UPI00093152F4 (cobalamin-binding protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI00093152F4) HSP 1 Score: 127 bits (319), Expect = 7.530e-32 Identity = 54/127 (42.52%), Postives = 87/127 (68.50%), Query Frame = 1
Query: 220 VGKHKKKVAFLEWLEPLFNGGHWIPDMVRAAGGEYTMAEPGNKSVGVTPEELSAYDADIILVAPCGMDRKRAVSDGKNMWRHEWWRNLRAVREGEVYGLDGNAYYARPGPRLLQGSGIIARLLNGDA 600
+G +K++AF+EW++P +GGHW+P+++ AGG G S +T ++++A D D+I+VAPCG D + + + +E W+NLRAVR+G+VY DGNAY+ RPGPRL+ + I+A +++ DA
Sbjct: 169 MGLPRKRLAFIEWVDPPMSGGHWMPELISTAGGISLFGVTGESSPWITWKDVAAADPDVIVVAPCGYDIDVTRREVRPLVHYEVWQNLRAVRDGQVYLADGNAYFNRPGPRLIDSAEILAEIMHPDA 295 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105802.489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig105802.489.1 >prot_F-distichus_contig105802.489.1 ID=prot_F-distichus_contig105802.489.1|Name=mRNA_F-distichus_contig105802.489.1|organism=Fucus distichus monoicous|type=polypeptide|length=221bp SVAEVIDSVRLVGRETGFAQEGEAEAQRLETGFAKIRAVVTKNAQGEAALback to top mRNA from alignment at F-distichus_contig105802:235..1788- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig105802.489.1 ID=mRNA_F-distichus_contig105802.489.1|Name=mRNA_F-distichus_contig105802.489.1|organism=Fucus distichus monoicous|type=mRNA|length=1554bp|location=Sequence derived from alignment at F-distichus_contig105802:235..1788- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig105802:235..1788- >mRNA_F-distichus_contig105802.489.1 ID=mRNA_F-distichus_contig105802.489.1|Name=mRNA_F-distichus_contig105802.489.1|organism=Fucus distichus monoicous|type=CDS|length=1326bp|location=Sequence derived from alignment at F-distichus_contig105802:235..1788- (Fucus distichus monoicous)back to top |