mRNA_F-distichus_contig104903.429.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig104903.429.1
Unique NamemRNA_F-distichus_contig104903.429.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig104903.429.1 vs. uniprot
Match: A0A6H5K5L9_9PHAE (Mannosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5L9_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 1.810e-121
Identity = 178/217 (82.03%), Postives = 198/217 (91.24%), Query Frame = 1
Query:    1 QVWIGVRMVHVVCCSFCEVLMYNAVKRKFGRQVGGFFLIFSATSAGIFVAAPALLPSSSSMTLFMLVMSLWLDGRFSLAIMASMLCVFGTGWPFVGIIFFPMLLNCAWLRLTRGVSFAEGLGAATASATWALICAVAVGGLAMWTDSGWYGRTTSPTLNILRYNVLDAGEGRGDELYGVEPASFYVKNLFLNTSLAFPLAVALPLLALLFYPMADKV 651
            Q+W+GVR+ HV+CC+ CEVLMY AVK+KFGR+ GGFFL+ SATSAG+FV+APALLPSSSSMTLFMLVM++WL G+FS AI+ +MLCVFGTGWPFVG+IF PMLLNCAWLRL RG SFAEGLGAATASATWA+ICAVA+  LA W DSGWYGRTTSPT NILRYNVLDAGEGRGDELYGVEPAS+YVKNLFLNTS+AFPLAV LPLLAL  YPMADKV
Sbjct:  134 QIWLGVRLFHVLCCTLCEVLMYLAVKQKFGRRAGGFFLLLSATSAGMFVSAPALLPSSSSMTLFMLVMAMWLQGQFSRAILVAMLCVFGTGWPFVGVIFIPMLLNCAWLRLRRGTSFAEGLGAATASATWAVICAVAIASLATWIDSGWYGRTTSPTFNILRYNVLDAGEGRGDELYGVEPASYYVKNLFLNTSVAFPLAVVLPLLALPLYPMADKV 350          
BLAST of mRNA_F-distichus_contig104903.429.1 vs. uniprot
Match: A0A835YXB7_9STRA (Mannosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXB7_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.180e-47
Identity = 95/208 (45.67%), Postives = 129/208 (62.02%), Query Frame = 1
Query:    4 VWIGVRMVHVVCCSFCEVLMYNAVKRKFGRQVGGFFLIFSATSAGIFVAAPALLPSSSSMTLFMLVMSLWLDGRFSLAIMASMLCVFGTGWPFVGIIFFPMLLNCAWLRLTRGVSFAEGLGAATASATWALICAVAVGGLAMWTDSGWYGRTTSPTLNILRYNVLDAGEGRGDELYGVEPASFYVKNLFLNTSLAFPLAVALPLLALL 627
            VW+G+R    V  +  EV +Y A K + G +VG   L+ S  SAG+F AAPALLPSS++M L  ++ +LW++ +++ AI    LCV GTGWPFV ++  P   NC    +T G     G     A  TW LIC  AVG +    DS +YG +  P  NI++YN L   +G+GDELYGVEP ++YVKNL +NTS A PLA+ LP++ LL
Sbjct:   70 VWMGIRGFWAVLSAAAEVHLYKAAKTRLGGRVGILTLLLSGGSAGMFSAAPALLPSSTAMILTTIMTALWMEWKWNAAIFVGALCVLGTGWPFVAVLMIPFTWNCLRDAMTTG-----GASRVAARITWGLICFGAVGAVTYAVDSSYYGTSAWPNFNIVKYNALS--QGKGDELYGVEPWTYYVKNLLINTSCAAPLALLLPVVMLL 270          
BLAST of mRNA_F-distichus_contig104903.429.1 vs. uniprot
Match: K8YQ02_NANGC (Mannosyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YQ02_NANGC)

HSP 1 Score: 122 bits (306), Expect = 1.830e-28
Identity = 82/215 (38.14%), Postives = 115/215 (53.49%), Query Frame = 1
Query:   19 RMVHVVCCSFCEVLMYNAVKRKFGRQVGGFFLIFSATSAGIFVAAPALLPSSSSMTLFMLVMSLWLDGRFSLAIMASMLCVFGTGWPFVGIIFFPMLLNCAWLRLTRGVSFAEGLGAATASATWAL-ICAVAVGGLAM------WTDSGWYGRTTSPTLNILRYNVLDAGEGRGDELYGVEPASFYVKNLFLNTSLAFPLAVALPLLALLFYPMA 642
            R+V  +  +  E    +AV R+FG + G        TSAG+F A+PALLPSS++    M+  + WL  R++ A +A++  V G GWPFV ++F P+ L+     L   VS + G G A       L + ++ V  L +        D  +Y R   P  +ILRYN+  A  G  D LYGVEP SFY+KNL LN ++  PL + LP L LL  P A
Sbjct:  187 RVVFSLISASSEATFVDAVTRRFGARPGFLTFALLLTSAGMFQASPALLPSSAASNFVMVTTACWLSRRYAWATLAAVTAVVGLGWPFVALLFLPLALH----TLYEAVSHSPGPGVARQCRQGFLYVLSLGVAALVLVLPPVLLVDGFFYRRCVLPVWSILRYNLGGAAVGADDTLYGVEPWSFYLKNLLLNFNVVLPLVLLLPFLLLLVPPPA 397          
BLAST of mRNA_F-distichus_contig104903.429.1 vs. uniprot
Match: A0A7R9BE73_9CRUS (Mannosyltransferase n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BE73_9CRUS)

HSP 1 Score: 109 bits (273), Expect = 4.000e-24
Identity = 81/205 (39.51%), Postives = 110/205 (53.66%), Query Frame = 1
Query:    4 VWIGVRMVHVVCCSFCEVLMYNAVKRKFGRQVGGFFLIFSATSAGIFVAAPALLPSSSSMTLFMLVMSLWLDGRFSLAIMASMLCVFGTGWPFVGIIFFPMLLNCAWLRLTRGVSFAEGLGAATASATWALICAVAVGGLAMWTDSGWYGRTTSPTLNILRYNVLDAGEGRGDELYGVEPASFYVKNLFLNTSLAFPLA-VALPL 615
            V+  +R V    C+ CEV  Y+ +K +FG + G   L    +SAG+F AA A LPSS SM L ML M  W +G + LA+++  +     GWPF  I+  P+ ++   LR      F +      AS    L+    +  L    DS  YG+    + NI++YNVL    G G ELYGVEP SFYV N FLN ++AF  A VALP+
Sbjct:  118 VFFFLRCVLGFACALCEVYFYSGIKERFGARCGRMTLGLLLSSAGMFHAATAFLPSSFSMYLTMLAMGAWFNGLYELAVVSVAISAL-LGWPFAAILGIPIAVDVL-LRKQLIWRFTK------ASVISLLVILAPMTNL----DSYMYGKLVIASWNIIKYNVL----GSGSELYGVEPLSFYVLNGFLNMNIAFLAALVALPI 306          
BLAST of mRNA_F-distichus_contig104903.429.1 vs. uniprot
Match: W5JS21_ANODA (Mannosyltransferase n=1 Tax=Anopheles darlingi TaxID=43151 RepID=W5JS21_ANODA)

HSP 1 Score: 108 bits (270), Expect = 8.530e-24
Identity = 76/203 (37.44%), Postives = 108/203 (53.20%), Query Frame = 1
Query:   19 RMVHVVCCSFCEVLMYNAVKRKFGRQVGGFFLIFSATSAGIFVAAPALLPSSSSMTLFMLVMSLWLDGRFSLAIMASMLCVFGTGWPFVGIIFFPMLLN-CAWLRLTRGVSFAEGLGAATASATWALICAVAVGGLAMWTDSGWYGRTTSPTLNILRYNVLDAGEGRGDELYGVEPASFYVKNLFLNTSLAFPLAVALPLLAL 624
            R +  + C+  E  +Y  +K K G  VG  +L F   S G+F+++ ALLPSS SM + +  M+ W+ GR S A++A        GWPF  I+  P +L    W R      FA+           AL+  +  G   +  DS ++G+ T   LNI+RYNV  +    G +LYGVEPASFYVKNL LN +L   L V  PL+++
Sbjct:   91 RCLLALVCALLEFRLYKVIKLKCGSSVGNMWLFFQLVSPGMFISSAALLPSSFSMFVTIATMTAWMAGR-SRAVIAVTALSGLIGWPFAVIVSIPFVLEQLIWKRQVW--DFAKH----------ALLFGLLWGVPIVLIDSYYFGKPTIAALNIVRYNVFTS---HGPDLYGVEPASFYVKNLLLNHNLLAALTVLFPLVSI 277          
BLAST of mRNA_F-distichus_contig104903.429.1 vs. uniprot
Match: A0A183BUS5_GLOPA (Mannosyltransferase n=1 Tax=Globodera pallida TaxID=36090 RepID=A0A183BUS5_GLOPA)

HSP 1 Score: 108 bits (270), Expect = 1.130e-23
Identity = 74/197 (37.56%), Postives = 102/197 (51.78%), Query Frame = 1
Query:   13 GVRMVHVVCCSFCEVLMYNAVKRKFGRQVGGFFLIFSATSAGIFVAAPALLPSSSSMTLFMLVMSLWLDGRFSLAIMASMLCVFGTGWPFVGIIFFPMLLNCAWLRLTRGVSFAEGLGAATASATWALICAVAVGGLAMWTDSGWYGRTTSPTLNILRYNVLDAGEGRGDELYGVEPASFYVKNLFLNTSLAFPLAV 603
             +R +    C F E+ +Y +V R+ G  VG  FL+FS  S  +F A+ A LPSS SM L  L M+LWL  ++ L+I  +       GWPF  ++  P++L     R    + F       + S   A +CAV         DS  +G+     LNI+ YN+  A    G  LYGVEPASFYV+NL LN ++  PLAV
Sbjct:  158 AIRFLIGALCLFAELSLYESVCRRAGNSVGRAFLLFSLLSPAMFGASCAFLPSSFSMALNALAMALWLREQWFLSIFLTASSAL-VGWPFAALLGLPIVLQMLLFRSQLALKFVL-YSFISGSVLLASLCAV---------DSHLFGKIVIAPLNIVLYNIFSA---HGPTLYGVEPASFYVRNLLLNFNVVVPLAV 340          
BLAST of mRNA_F-distichus_contig104903.429.1 vs. uniprot
Match: A0A2M4AFY8_9DIPT (Mannosyltransferase n=1 Tax=Anopheles triannulatus TaxID=58253 RepID=A0A2M4AFY8_9DIPT)

HSP 1 Score: 107 bits (267), Expect = 2.190e-23
Identity = 74/202 (36.63%), Postives = 109/202 (53.96%), Query Frame = 1
Query:   19 RMVHVVCCSFCEVLMYNAVKRKFGRQVGGFFLIFSATSAGIFVAAPALLPSSSSMTLFMLVMSLWLDGRFSLAIMASMLCVFGTGWPFVGIIFFPMLLNCAWLRLTRGVSFAEGLGAATASATWALICAVAVGGLAMWTDSGWYGRTTSPTLNILRYNVLDAGEGRGDELYGVEPASFYVKNLFLNTSLAFPLAVALPLLAL 624
            R +  + C+  E  +Y  +K K G  VG  +L F   + G+F+++ ALLPSS SM + M +M+ W+ GR S A++A        GWPF  I+  P ++    +   +   FA+           AL+  +  G   +  DS ++G+ T   LNI+RYNV  +    G +LYGVEPASFYVKNL LN +L   L V  PL+A+
Sbjct:   91 RCLLALVCALLEFRLYKVIKVKCGSSVGNTWLFFQLVNPGMFISSAALLPSSFSMFVTMAIMADWISGR-SRAVIAVTALSGLIGWPFAVIVSIPFVVE-ELIGKRKVWDFAKA----------ALLFGLLWGVPIVLIDSFYFGKLTIAALNIVRYNVFTS---HGPDLYGVEPASFYVKNLLLNHNLLAALTVLCPLVAI 277          
BLAST of mRNA_F-distichus_contig104903.429.1 vs. uniprot
Match: A0A1V9YIN8_9STRA (Mannosyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIN8_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.240e-23
Identity = 76/207 (36.71%), Postives = 108/207 (52.17%), Query Frame = 1
Query:    4 VWIGVRMVHVVCCSFCEVLMYNAVKRKFGRQVGGFFLIFSATSAGIFVAAPALLPSSSSMTLFMLVMSLWLDGRFSLAIMASMLCVFGT--GWPFVGIIFFPMLLNCAWLRLTRGVSFAEGLGAATASATWALICAVAVGGLAMWTDSGWYGRTTSPTLNILRYNVLDAGEGRGDELYGVEPASFYVKNLFLNTSLAFPLA-VALPL 615
            ++ G+R      C+F E L Y  V + FG + G + L+  A ++G+F A+ A LPSS  M L ML    W+    S +  A +  V     GWP+VG++  P  L+         V F       T     A++ AV +G     T+  +Y     P +NI+ YNV+ AG     ELYGVEPAS+YV NLFLN ++A PLA +ALP+
Sbjct:  117 IFFGLRTALGFACAFSEALFYRGVVKAFGARTGRYTLLLLAFNSGMFQASTAFLPSSFVMYLLMLSAGFWMSDSTSFSTPALVTGVVAVVCGWPYVGVMCLPFALDAI-------VRFGVVRPILTGIVVLAIVVAVEIG-----TNYYFYRAIVLPAVNIVLYNVVSAGS----ELYGVEPASYYVVNLFLNFNVALPLACLALPI 307          
BLAST of mRNA_F-distichus_contig104903.429.1 vs. uniprot
Match: A0A182ITW3_9DIPT (Mannosyltransferase n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182ITW3_9DIPT)

HSP 1 Score: 105 bits (263), Expect = 7.560e-23
Identity = 72/211 (34.12%), Postives = 110/211 (52.13%), Query Frame = 1
Query:   19 RMVHVVCCSFCEVLMYNAVKRKFGRQVGGFFLIFSATSAGIFVAAPALLPSSSSMTLFMLVMSLWLDGRFSLAIMASMLCVFGTGWPFVGIIFFPMLLNCAWLRLTRGV-SFAEGLGAATASATWALICAVAVGGLAMWTDSGWYGRTTSPTLNILRYNVLDAGEGRGDELYGVEPASFYVKNLFLNTSLAFPLAVALPLLALLFYPMADK 648
            R +  V C+  E  +Y  +++K G  VG  FLIF     G+F+++ ALLPSS +M + +  M+ W++ +    I  +       GWPF  I+  P ++     R  +G+  F +           A++  V  G   +  DS ++GR T   LNI+RYNV  +    G +LYGVEPASFY+KNLFLN ++A  +    PL  +L   +A K
Sbjct:   90 RCLLAVVCAILEYRLYKTIRQKCGTSVGNMFLIFQLICPGMFISSAALLPSSFAMYITIATMTAWMNDQMKTVIAITAFSGL-IGWPFAVIVSIPFVVEQLVKR--KGIMEFVKN----------AILFGVLFGVPIVLIDSAYFGRPTVAALNIVRYNVFTS---HGPDLYGVEPASFYLKNLFLNHNVALVMCSLYPLGVILATALAVK 284          
BLAST of mRNA_F-distichus_contig104903.429.1 vs. uniprot
Match: A0A8H3YET2_9TREE (Mannosyltransferase n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3YET2_9TREE)

HSP 1 Score: 105 bits (261), Expect = 1.820e-22
Identity = 76/204 (37.25%), Postives = 109/204 (53.43%), Query Frame = 1
Query:   34 VCCSFCEVLMYNAVKRKFGRQVGGFFLIFSATSAGIFVAAPALLPSSSSMTLFMLVMSLWLDGRFSLA------IMASMLCVFGT--GWPFVGIIFFPMLLNCAWLR-----LTRGVSFAEGLGAATASATWALICAVAVGGLAMWTDSGWYGRTTSPTLNILRYNVLDAGEGRGDELYGVEPASFYVKNLFLNTSLAFPLAVA 606
            + CS CE   Y +V      +VG + L F   SAG++ A  A LPSS +M L ML  + +LD   + A      +MA++    G   GWPF  ++  P ++   +++     + R V  A  +    A    A++ A AV    +  DS  YG+ T PTLNI+ YN+     G+G ELYG EPA+FY+ NLFLN +LA PLA+A
Sbjct:  156 IICSVCEAKFYRSVVENINERVGRYTLAFMILSAGMWNAGVAFLPSSFAMNLTMLAYAYYLDPSTTDARGDRRVMMATLSFAIGAIVGWPFAALLALPFIVEEVFVKSGDEVVGRDVVVAWRIER-VARLIKAVVFAAAVAVPVIAFDSWAYGKPTFPTLNIVLYNLFS---GKGPELYGTEPATFYLANLFLNFNLALPLALA 355          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig104903.429.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5L9_9PHAE1.810e-12182.03Mannosyltransferase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835YXB7_9STRA2.180e-4745.67Mannosyltransferase n=1 Tax=Tribonema minus TaxID=... [more]
K8YQ02_NANGC1.830e-2838.14Mannosyltransferase n=3 Tax=Monodopsidaceae TaxID=... [more]
A0A7R9BE73_9CRUS4.000e-2439.51Mannosyltransferase n=1 Tax=Notodromas monacha Tax... [more]
W5JS21_ANODA8.530e-2437.44Mannosyltransferase n=1 Tax=Anopheles darlingi Tax... [more]
A0A183BUS5_GLOPA1.130e-2337.56Mannosyltransferase n=1 Tax=Globodera pallida TaxI... [more]
A0A2M4AFY8_9DIPT2.190e-2336.63Mannosyltransferase n=1 Tax=Anopheles triannulatus... [more]
A0A1V9YIN8_9STRA2.240e-2336.71Mannosyltransferase n=1 Tax=Achlya hypogyna TaxID=... [more]
A0A182ITW3_9DIPT7.560e-2334.12Mannosyltransferase n=1 Tax=Anopheles atroparvus T... [more]
A0A8H3YET2_9TREE1.820e-2237.25Mannosyltransferase n=1 Tax=Naganishia liquefacien... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig104903contigF-distichus_contig104903:146..1633 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.7
Seed ortholog evalue9.2e-94
Seed eggNOG ortholog2880.D7FKV5
Preferred nameALG9
KEGG koko:K03846
KEGG ReactionR06259,R06261
KEGG Pathwayko00510,ko00513,ko01100,map00510,map00513,map01100
KEGG ModuleM00055
Hectar predicted targeting categorysignal anchor
GOsGO:0000026,GO:0000030,GO:0003674,GO:0003824,GO:0004376,GO:0004377,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006508,GO:0006511,GO:0006629,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019941,GO:0030163,GO:0030176,GO:0030433,GO:0031224,GO:0031227,GO:0031984,GO:0033554,GO:0034645,GO:0034976,GO:0036211,GO:0036503,GO:0042175,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051603,GO:0051716,GO:0070085,GO:0071704,GO:0097502,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698
EggNOG free text desc.dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
EggNOG OGsKOG2515@1,KOG2515@2759
Ec32 ortholog descriptionAlpha-1,2-mannosyltransferase, family GT22
Ec32 orthologEc-17_001510.1
EC2.4.1.259,2.4.1.261
COG Functional cat.M
CAZyGT22
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Exons4
Model size651
Cds size630
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig104903.429.1prot_F-distichus_contig104903.429.1Fucus distichus monoicouspolypeptideF-distichus_contig104903 146..1612 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928970.1452568-CDS-F-distichus_contig104903:145..3141622928970.1452568-CDS-F-distichus_contig104903:145..314Fucus distichus monoicousCDSF-distichus_contig104903 146..314 -
1690885086.2100954-CDS-F-distichus_contig104903:145..3141690885086.2100954-CDS-F-distichus_contig104903:145..314Fucus distichus monoicousCDSF-distichus_contig104903 146..314 -
1622928970.1600313-CDS-F-distichus_contig104903:662..9071622928970.1600313-CDS-F-distichus_contig104903:662..907Fucus distichus monoicousCDSF-distichus_contig104903 663..907 -
1690885086.2237854-CDS-F-distichus_contig104903:662..9071690885086.2237854-CDS-F-distichus_contig104903:662..907Fucus distichus monoicousCDSF-distichus_contig104903 663..907 -
1622928970.1748102-CDS-F-distichus_contig104903:1259..14041622928970.1748102-CDS-F-distichus_contig104903:1259..1404Fucus distichus monoicousCDSF-distichus_contig104903 1260..1404 -
1690885086.236431-CDS-F-distichus_contig104903:1259..14041690885086.236431-CDS-F-distichus_contig104903:1259..1404Fucus distichus monoicousCDSF-distichus_contig104903 1260..1404 -
1622928970.1909273-CDS-F-distichus_contig104903:1541..16121622928970.1909273-CDS-F-distichus_contig104903:1541..1612Fucus distichus monoicousCDSF-distichus_contig104903 1542..1612 -
1690885086.2448318-CDS-F-distichus_contig104903:1541..16121690885086.2448318-CDS-F-distichus_contig104903:1541..1612Fucus distichus monoicousCDSF-distichus_contig104903 1542..1612 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928970.2027829-UTR-F-distichus_contig104903:1612..16331622928970.2027829-UTR-F-distichus_contig104903:1612..1633Fucus distichus monoicousUTRF-distichus_contig104903 1613..1633 -
1690885086.260193-UTR-F-distichus_contig104903:1612..16331690885086.260193-UTR-F-distichus_contig104903:1612..1633Fucus distichus monoicousUTRF-distichus_contig104903 1613..1633 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig104903.429.1

>prot_F-distichus_contig104903.429.1 ID=prot_F-distichus_contig104903.429.1|Name=mRNA_F-distichus_contig104903.429.1|organism=Fucus distichus monoicous|type=polypeptide|length=210bp
MVHVVCCSFCEVLMYNAVKRKFGRQVGGFFLIFSATSAGIFVAAPALLPS
SSSMTLFMLVMSLWLDGRFSLAIMASMLCVFGTGWPFVGIIFFPMLLNCA
WLRLTRGVSFAEGLGAATASATWALICAVAVGGLAMWTDSGWYGRTTSPT
LNILRYNVLDAGEGRGDELYGVEPASFYVKNLFLNTSLAFPLAVALPLLA
LLFYPMADKV
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mRNA from alignment at F-distichus_contig104903:146..1633-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig104903.429.1 ID=mRNA_F-distichus_contig104903.429.1|Name=mRNA_F-distichus_contig104903.429.1|organism=Fucus distichus monoicous|type=mRNA|length=1488bp|location=Sequence derived from alignment at F-distichus_contig104903:146..1633- (Fucus distichus monoicous)
CAGGTGTGGATAGGTGTGCGAATGGTTCATGTCGTGTGTTGTTCGTTCTG CGAGGTTCTGATGTACAACGCCGTCAAAAGAAAATTCGGAAGGTGCGTTC TGATGCGCTCGTACGAAGCGAACGGCGTGTGTAGGGAACGACGGAGACGC GTGGGAAATTTCGCTTCAGCCCCCTCCTTATACGAAATTGCCTCCCCTAC ATTAATCTCACGTACGTGCCCCTGCGCAGGCAAGTGGGAGGGTTTTTCTT GATTTTTTCTGCTACTTCGGCGGGTATTTTTGTCGCTGCCCCAGCCCTTC TTCCCTCATCTTCGAGCATGACGCTTTTCATGCTCGTTATGTCCTTGTGG CTTGATGGACGCTTCAGCCTCGCGGTGAGGTCTTCATCGCTCGTTAATTG GCCTTCGTGCCCCGACGTTTAAGCTGTATTGTAGTGAACCATCATTTCAT AGCGAGTAACAGTAACGTGCAAGATACCAACTGAAGCAATCAATCCCTGA GCCTACATAGCCCGTAAGTTGTTGTTTTTGTGTGATAAAGCACTCCGCAC TTGCTTTTGATCCTGACTAGCCCTGCATATACTTTCAAGTCGATTAACGC TGTCGAGCTTTCTCCGCTGTGGCAGTGTAGTTATCGGCCCCCATGCCTTA CTTATACATATCTGCCTTACATAACTCGTGAATGATAATTATCCAACCCC TTCCGGCCCGATCGATTGCCGTACAGATCATGGCTTCGATGCTATGCGTG TTCGGCACAGGTTGGCCTTTCGTGGGGATCATCTTCTTTCCGATGTTGCT TAACTGCGCTTGGCTGCGTTTAACTCGTGGGGTTTCGTTTGCCGAAGGAC TCGGGGCAGCGACGGCATCGGCAACGTGGGCCTTGATCTGCGCTGTAGCC GTGGGTGGCCTTGCCATGTGGACGGACAGCGGGTGGTACGGCCGGACTAC GTCACCAACCCTGAACATACTGTGCGTCGTTCCTTCTCGACCGGACCTAG ACTTCGCGCCACCTAGTTGTATGCGAAGCTTTACTTTCGGTACAGTCCAT CTATCAGGACCACTATAATAGTACCACCCTCACATATTCTCATCTCGTGG GCCAGCGATGACCTTCGGCTTGCCCCATCACCAACGCGCATCCTTCTGTC ATTGCCAAGTGCCACCTTTCGGGTGCCGGTGCGCGTGTGCCATCGGCTGC AGTTGTGCTCGACCACGTATGACCGCCGTCTAAACTCGGTGTTTCAACCC TTGATGACCCTTTCTAGTGTTTCCCCTGCGTCGCTCGTGGCAATACATGA TGGATGCGCGATGTTGAAGGAGGTACAACGTTCTCGACGCCGGCGAGGGT CGTGGTGATGAACTGTACGGCGTTGAGCCGGCATCGTTCTACGTGAAGAA TCTGTTCCTCAACACGTCCTTGGCGTTCCCACTCGCTGTAGCACTTCCGC TCCTGGCCTTGCTCTTTTACCCCATGGCGGACAAGGTT
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Coding sequence (CDS) from alignment at F-distichus_contig104903:146..1633-

>mRNA_F-distichus_contig104903.429.1 ID=mRNA_F-distichus_contig104903.429.1|Name=mRNA_F-distichus_contig104903.429.1|organism=Fucus distichus monoicous|type=CDS|length=1260bp|location=Sequence derived from alignment at F-distichus_contig104903:146..1633- (Fucus distichus monoicous)
ATGGTTCATGTCGTGTGTTGTTCGTTCTGCGAGGTTCTGATGTACAACGC
CGTCAAAAGAAAATTCGGAAGATGGTTCATGTCGTGTGTTGTTCGTTCTG
CGAGGTTCTGATGTACAACGCCGTCAAAAGAAAATTCGGAAGGCAAGTGG
GAGGGTTTTTCTTGATTTTTTCTGCTACTTCGGCGGGTATTTTTGTCGCT
GCCCCAGCCCTTCTTCCCTCATCTTCGAGCATGACGCTTTTCATGCTCGT
TATGTCCTTGTGGCTTGATGGACGCTTCAGCCTCGCGGCAAGTGGGAGGG
TTTTTCTTGATTTTTTCTGCTACTTCGGCGGGTATTTTTGTCGCTGCCCC
AGCCCTTCTTCCCTCATCTTCGAGCATGACGCTTTTCATGCTCGTTATGT
CCTTGTGGCTTGATGGACGCTTCAGCCTCGCGATCATGGCTTCGATGCTA
TGCGTGTTCGGCACAGGTTGGCCTTTCGTGGGGATCATCTTCTTTCCGAT
GTTGCTTAACTGCGCTTGGCTGCGTTTAACTCGTGGGGTTTCGTTTGCCG
AAGGACTCGGGGCAGCGACGGCATCGGCAACGTGGGCCTTGATCTGCGCT
GTAGCCGTGGGTGGCCTTGCCATGTGGACGGACAGCGGGTGGTACGGCCG
GACTACGTCACCAACCCTGAACATACTATCATGGCTTCGATGCTATGCGT
GTTCGGCACAGGTTGGCCTTTCGTGGGGATCATCTTCTTTCCGATGTTGC
TTAACTGCGCTTGGCTGCGTTTAACTCGTGGGGTTTCGTTTGCCGAAGGA
CTCGGGGCAGCGACGGCATCGGCAACGTGGGCCTTGATCTGCGCTGTAGC
CGTGGGTGGCCTTGCCATGTGGACGGACAGCGGGTGGTACGGCCGGACTA
CGTCACCAACCCTGAACATACTGAGGTACAACGTTCTCGACGCCGGCGAG
GGTCGTGGTGATGAACTGTACGGCGTTGAGCCGGCATCGTTCTACGTGAA
GAATCTGTTCCTCAACACGTCCTTGGCGTTCCCACTCGCTGTAGCACTTC
CGCTCCTGGCCTTGCTCTTTTACCCCATGGCGGACAAGGTTGAGGTACAA
CGTTCTCGACGCCGGCGAGGGTCGTGGTGATGAACTGTACGGCGTTGAGC
CGGCATCGTTCTACGTGAAGAATCTGTTCCTCAACACGTCCTTGGCGTTC
CCACTCGCTGTAGCACTTCCGCTCCTGGCCTTGCTCTTTTACCCCATGGC
GGACAAGGTT
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