mRNA_F-distichus_contig103967.351.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig103967.351.1 vs. uniprot
Match: A0A6H5KNK6_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK6_9PHAE) HSP 1 Score: 240 bits (612), Expect = 8.450e-72 Identity = 116/164 (70.73%), Postives = 135/164 (82.32%), Query Frame = 1
Query: 1 TGNCVGARNYRAFMAFIILLTISSAAVCALSVIHFITRALRLGPRYLTDSFAMPGSRFVSPVLGLWTAMITVLVGALLCFHIYLLSRGQTTNEYLRGEKRRGNVPHGSFFPNCRQLWCGPRPPSLLPNMTELYDRDDSRVDVSFAVDQYTELQDVTTPQGGDLV 492
TGNCVGARNYRAFMAFIIL+TISS+ VCA+SV+H +TR +GP YLTDS +PGSR VSPVLG+WTAMITVLVGALLCFH+YLL++GQTTNEYLRGEKRRGNVPH SF PNCR+LWCG +P S+L +M+E VS+ + YTELQ+V PQGGDLV
Sbjct: 660 TGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSRLVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPASMLADMSEFSTGHTVHGGVSYTANAYTELQEVIRPQGGDLV 823
BLAST of mRNA_F-distichus_contig103967.351.1 vs. uniprot
Match: D7FZN5_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN5_ECTSI) HSP 1 Score: 210 bits (534), Expect = 1.800e-63 Identity = 98/122 (80.33%), Postives = 111/122 (90.98%), Query Frame = 1
Query: 1 TGNCVGARNYRAFMAFIILLTISSAAVCALSVIHFITRALRLGPRYLTDSFAMPGSRFVSPVLGLWTAMITVLVGALLCFHIYLLSRGQTTNEYLRGEKRRGNVPHGSFFPNCRQLWCGPRP 366
TGNCVGARNYR+FMAFIIL+TISS+ VCA+SV+H +TR +GP YLTDS +PGSRFVSPVLGLWTAMITVLVGALLCFH+YLL++GQTTNEYLRGEKRRGNVPH SF PNCR+LWCG +P
Sbjct: 314 TGNCVGARNYRSFMAFIILITISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP 435
BLAST of mRNA_F-distichus_contig103967.351.1 vs. uniprot
Match: D8LTN2_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN2_ECTSI) HSP 1 Score: 150 bits (380), Expect = 5.740e-42 Identity = 77/139 (55.40%), Postives = 99/139 (71.22%), Query Frame = 1
Query: 1 TGNCVGARNYRAFMAFIILLTISSAAVCALSVIHFIT-RALRLGPRYLTDSFAMPGSRFVSPVLGLWTAMITVLVGALLCFHIYLLSRGQTTNEYLRGEKRRGNVPHGSFFPNCRQLWCGPRPPSLLPNMTELYDRDDS 414
TGNC+GARNYRAFMAFI ++TIS CALSV+H + RA +GP L + +PGS+F +L LWTA++ VLVG LL FHI+L+++GQTTNEYLR E G+ F +C +LWCG RPPSLL +MTE + D+S
Sbjct: 149 TGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARPPSLLSDMTESVNTDNS 287
BLAST of mRNA_F-distichus_contig103967.351.1 vs. uniprot
Match: A0A7S3UWP6_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWP6_HETAK) HSP 1 Score: 141 bits (356), Expect = 1.020e-37 Identity = 76/159 (47.80%), Postives = 103/159 (64.78%), Query Frame = 1
Query: 1 TGNCVGARNYRAFMAFIILLTISSAAVCALSVIHFITRALR-LGPRYLT----DSFAMPGSRFVSPVLGLWTAMITVLVGALLCFHIYLLSRGQTTNEYLRGEKRRGNVPHGSFFPNCRQLWCGPRPPSLLPNMTELYDRDDSRVDVSFAVDQYTELQD 462
TGNC+G RNYR F F++ +T SSA V +S +++TR L + +Y D + + G +F++P+L LWT ++T LVGALL FHI LL RGQTTNEYLRGEK RG++PHG+ F NC LWC P S L M E ++D ++ AVD + LQ+
Sbjct: 82 TGNCIGRRNYRFFYLFLMSITASSAYVLVMSA-NYLTRHLTDIDSKYFDAIFKDEWKIKGGQFIAPLLILWTLLVTTLVGALLVFHIILLGRGQTTNEYLRGEKNRGDIPHGNIFTNCGNLWCHDMPESRLLPMWEHPGKEDDDRNLKAAVDAMSSLQE 239
BLAST of mRNA_F-distichus_contig103967.351.1 vs. uniprot
Match: A0A835YZ83_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ83_9STRA) HSP 1 Score: 123 bits (308), Expect = 6.580e-31 Identity = 66/153 (43.14%), Postives = 85/153 (55.56%), Query Frame = 1
Query: 4 GNCVGARNYRAFMAFIILLTISSAAVCALSVIHFITRALRLGPRYLTDSFAMPGSRFVSPVLGLWTAMITVLVGALLCFHIYLLSRGQTTNEYLRGEKRRGNVPHGSFFPNCRQLWCGPRPPSLLPNMTELYDRDDSRVDVSFAVDQYTELQD 462
GNC+G RNYR+F+ F+I+L LS IH +TR +GP LT +PGS +VSP LG+W ++T +VG LL H+YLL +GQTTNE+L+GE G C LWC PPSLLP E +DD + A L D
Sbjct: 180 GNCIGHRNYRSFLRFLIVLAXXXXXXXXLSAIHALTRLGNVGPEDLTSQSGVPGSEYVSPFLGVWALLVTAIVGGLLLLHMYLLFQGQTTNEFLKGEPVH---VRGRVMRKCLLLWCERLPPSLLPPFDEYPTQDDVDANAKRATATLESLSD 329
BLAST of mRNA_F-distichus_contig103967.351.1 vs. uniprot
Match: A0A6H5LMK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMK7_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 2.020e-14 Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 163 GSRFVSPVLGLWTAMITVLVGALLCFHIYLLSRGQTTNEYLRGEKRRGNVPHGSFFPNCRQLWCGPRP 366
GS+FV +L LWTA++ +LVG LLCFH++L+++ QTTN YLR E G+ F +C +LW G RP
Sbjct: 96 GSQFVPHLLALWTAVVMILVGGLLCFHVFLVTKSQTTNLYLRREAPSGSRLGRPFLASCHELWSGARP 163
BLAST of mRNA_F-distichus_contig103967.351.1 vs. uniprot
Match: A0A7R9UDC7_9STRA (Palmitoyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDC7_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.480e-11 Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 4 GNCVGARNYRAFMAFIILLTISSAAVCALSVIHFITRALRLGPRYLTDSFAMPGSRFVSPVLGLWTAMITVLVGALLCFHIYLLSRGQTTNEYLRGEKRR 303
GNC+GARNYR F+ FII ++ V ++S+ F++ L + D A R ++ VL WT ++T LVGAL FH L+ GQTTNEY++ + R
Sbjct: 249 GNCIGARNYRFFLLFIISTVLACVFVLSVSLYAFLSGTGGLIVQVQDDPGADTVLRVLALVLVFWTFLLTALVGALTFFHCSLMCMGQTTNEYVKAARAR 348
BLAST of mRNA_F-distichus_contig103967.351.1 vs. uniprot
Match: A0A812WJG5_SYMMI (Palmitoyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WJG5_SYMMI) HSP 1 Score: 70.5 bits (171), Expect = 3.230e-11 Identity = 52/142 (36.62%), Postives = 72/142 (50.70%), Query Frame = 1
Query: 1 TGNCVGARNYRAFMAFIILLTISSAAVCALSVIHFITRALRLG--PR---YLTDSFAMPGSRFVSPVLGLWTAMITVLVGALLCFHIYLLSRGQTTNEYLRGEKRRGNVPHGSFFPNCRQLWCGPRPPSLLPNMTELYDRDD 411
TG C+G RNY F FI L T+S+A C+ S + A PR Y+ D V+P++ +T ++ VLVG+LL FH++L+ R QTTNE+LRG + + S N +L P S L M E DD
Sbjct: 217 TGTCIGVRNYAYFCVFITLATVSAAFACSTSAYLIVQWAEGRNHEPRLLMYIRD--------VVAPLVCAFTLLVFVLVGSLLAFHLFLIGRQQTTNEFLRGVRPSHSDYKNSTTGNVVKLCNTSIPDSKLLPMWEKCQADD 350
BLAST of mRNA_F-distichus_contig103967.351.1 vs. uniprot
Match: F0Y087_AURAN (Palmitoyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y087_AURAN) HSP 1 Score: 67.8 bits (164), Expect = 2.460e-10 Identity = 35/99 (35.35%), Postives = 56/99 (56.57%), Query Frame = 1
Query: 4 GNCVGARNYRAFMAFIILLTISSAAVCALSVIHFITRALRLGPRYLTDSFAMPGSRFVSPVLGLWTAMITVLVGALLCFHIYLLSRGQTTNEYLRGEKR 300
G CVGARNYRAF+ F++ + VC+ + + + R + ++ G V+ + W+A++ + V L+ FH+YL+ QTTNEYLR E+R
Sbjct: 160 GTCVGARNYRAFVLFLVWTLAGALYVCSRAARYLV----RCSTVHACSAYVDFGRPIVAGISVAWSAVVALPVATLIAFHLYLMGHDQTTNEYLRDERR 254
BLAST of mRNA_F-distichus_contig103967.351.1 vs. uniprot
Match: Q00TM9_OSTTA (S-acyltransferase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q00TM9_OSTTA) HSP 1 Score: 65.9 bits (159), Expect = 1.130e-9 Identity = 54/164 (32.93%), Postives = 76/164 (46.34%), Query Frame = 1
Query: 1 TGNCVGARNYRAFMAFIILLTISSAAVCALSVI---HFITRALRLGPRYLTDSFAMPGSR---FVSPVLGLWTAMITVLVGALLCFHIYLLSRGQTTNEYLRGEKRRGNVPH--GSFFPNCRQLWCGP-RPPSLLPNMTELYDRDDSRVDVSFAVDQYTELQDV 465
TG +G RNYRAF++F T +AA+CA + + + I+ R G TD G+ F+ ++G + VGAL CFH YL+S QTT E R P+ GS F NC ++WC PP + N+ D+ +R E DV
Sbjct: 156 TGTTIGRRNYRAFLSF----TFGTAALCAWTCVGCGYAISYESRGGEA--TDGLKRSGAAIAVFLIAIIGF------LFVGALSCFHAYLVSTNQTTYESFRDAHSWSTNPYNTGSVFKNCLEVWCARIGPPRVRFNVPVSEDQSAARFQAEIEAQTDVERGDV 307 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig103967.351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig103967.351.1 >prot_F-distichus_contig103967.351.1 ID=prot_F-distichus_contig103967.351.1|Name=mRNA_F-distichus_contig103967.351.1|organism=Fucus distichus monoicous|type=polypeptide|length=165bp TGNCVGARNYRAFMAFIILLTISSAAVCALSVIHFITRALRLGPRYLTDSback to top mRNA from alignment at F-distichus_contig103967:290..1882- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig103967.351.1 ID=mRNA_F-distichus_contig103967.351.1|Name=mRNA_F-distichus_contig103967.351.1|organism=Fucus distichus monoicous|type=mRNA|length=1593bp|location=Sequence derived from alignment at F-distichus_contig103967:290..1882- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig103967:290..1882- >mRNA_F-distichus_contig103967.351.1 ID=mRNA_F-distichus_contig103967.351.1|Name=mRNA_F-distichus_contig103967.351.1|organism=Fucus distichus monoicous|type=CDS|length=990bp|location=Sequence derived from alignment at F-distichus_contig103967:290..1882- (Fucus distichus monoicous)back to top |