mRNA_F-distichus_contig10268.236.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10268.236.1
Unique NamemRNA_F-distichus_contig10268.236.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10268.236.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 3.520e-71
Identity = 128/266 (48.12%), Postives = 160/266 (60.15%), Query Frame = 2
Query:    2 CGNNYGWVRFEGSRCTEYSEDAYGPCADVDRSGITPPAFEYCHVDYDSSPSSEDEYTGGNDICGDRSIVGNTVIGGHVYRGQAFFDLLYGAYVFADHSLRNIYYIKMNDDGTWDKGTIISDRSVAVLSFAEDMNGELFIIDSNSEILYLPCGDLCIDPDIPEDDDTASYTYLGCYGD--------NKDRIFSGNSLQQYAEMTTEFCSGFCQ--GSAYFGTQYNRECWCGEATDDPTILGTTTCNKPCFGDASQICGGTWAMSVYE 769
            CGNNYGW RFEGSRC E  E   GPC D DRS  T P +EYCH DY S  + E ++  G DICG R + G  VIGG+VYRG  F D+LYGAYVF D++  NIYYI + D+G W  GTIISD SV+V+ FAED NGEL +ID +  I  LPCGD+C    + + D   +Y  LGC+ D        N D I +   L     M+   C+ +C   G+ Y G QY  EC+CG  +D      +TTCN  C G  S+ CGG +++ VYE
Sbjct:  348 CGNNYGWSRFEGSRCQEAQESRDGPCLDTDRSAFTFPIYEYCHPDYSSDDADEADFVAGVDICGTRMVSGTAVIGGYVYRGTYFADVLYGAYVFGDNTSNNIYYI-VQDNGVWSVGTIISDSSVSVIGFAEDNNGELMVIDQDYNIYQLPCGDMCASTCLDQSDQQPTYESLGCFVDVLGDRALENDDAIRA--CLVDERVMSPAICASYCYTLGATYAGVQYGFECFCGVDSDYSRHGTSTTCNMECTGYPSESCGGVFSIEVYE 610          
BLAST of mRNA_F-distichus_contig10268.236.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 6.750e-67
Identity = 121/265 (45.66%), Postives = 166/265 (62.64%), Query Frame = 2
Query:    2 CGNNYGWVRFEGSRCTEYSED-AYGPCAD-VDRSGITPPAFEYCHVDYDSSPSSEDEYTGGNDICGDRSIVGNTVIGGHVYRGQAFFDLLYGAYVFADHSLRNIYYIKMNDDGTWDKGTIISDRSVAVLSFAEDMNGELFIIDSNSEILYLPCGDLCIDPDIPEDDDTASYTYLGCYGDNKDRIFSGNSLQQYAE----MTTEFCSGFC--QGSAYFGTQYNRECWCGEATDDPTILGT---TTCNKPCFGDASQICGGTWAMSV 763
            CGNNYGW RFEGSRC E  ED  + P  D + RSG T P +EYCH DY S+   +DE+T GNDICGDR ++GN VIGG+VYRG  F DLL GAY+F D +++NIYY+ + +DG W  GTIISD SV ++SF+ED+NGE+ ++D    I ++PCGDLC    + + +D  +Y  +GC+ D  D     +      E    M+   C+ +C  QG+ YFG +++ EC+CG +T D    G+   + C   C  +  Q CGG  A+ V
Sbjct:  411 CGNNYGWSRFEGSRCQEAVEDNEFNPACDGISRSGFTFPLYEYCHPDYQST--GDDEFTAGNDICGDRVLLGNAVIGGYVYRGNYFSDLLNGAYIFGDSTMKNIYYL-VEEDGGWSLGTIISDASVQIISFSEDINGEIVLLDLQHNIYHMPCGDLCATTCLDQTEDQPTYDSVGCFADEVDDRALPDQADNCGEGETAMSPSICASYCETQGATYFGVEFSYECFCGSSTADFDKHGSLPDSECEYLCDANPDQFCGGFGAIEV 672          
BLAST of mRNA_F-distichus_contig10268.236.1 vs. uniprot
Match: D7G961_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 1.450e-60
Identity = 117/266 (43.98%), Postives = 159/266 (59.77%), Query Frame = 2
Query:    2 CGNNYGWVRFEGSRCTEYSEDAY--GPCADVDRSGITPPAFEYCHVDYDSSPSSEDEYTGGNDICGDRSIVGNTVIGGHVYRGQAFFDLLYGAYVFADHSLRNIYYIKMNDDGTWDKGTIISDRSVAVLSFAEDMNGELFIIDSNSEILYLPCGDLCIDPDIPEDDDTASYTYLGCYGDN-KDRIF---SGNSLQQYAEMTTEFCSGFCQ--GSAYFGTQYNRECWCGEATDDPTILGTTTCNKPCFGDASQICGGTWAMSVYEYE 775
            CGNNYGW RFEGSRC E  +D     PC  VDRS  T P FEYCH D+DS+ + E E+TGG D CG+R +VGN VIGG+VYRG  F DLL GAY+F D ++RNIY++K  +DG W  GTI+SD SV ++SFAED+NGE+ ++D N +I ++PCGDLC+   + + +D  +Y  LGC+ D+  DR     + N       M+   C+ +C+  GS +FG QY+ + +                         + CGG   M V+  E
Sbjct:  329 CGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSDFTYPLFEYCHPDFDSTDADEQEFTGGADTCGNRFVVGNCVIGGYVYRGNFFSDLLDGAYIFGDSTMRNIYFLKEEEDG-WAVGTIVSDASVQIISFAEDVNGEIVLLDYNHDIYHMPCGDLCVTTCLDQAEDQPAYESLGCFADDVNDRALPTEADNCGVGETAMSPAICASYCETLGSTFFGVQYSFQAY-----------------------PDEFCGGFSTMEVFTIE 570          
BLAST of mRNA_F-distichus_contig10268.236.1 vs. uniprot
Match: A0A6H5KT40_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT40_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 1.630e-53
Identity = 95/171 (55.56%), Postives = 121/171 (70.76%), Query Frame = 2
Query:    2 CGNNYGWVRFEGSRCTEYSEDAY--GPCADVDRSGITPPAFEYCHVDYDSSPSSEDEYTGGNDICGDRSIVGNTVIGGHVYRGQAFFDLLYGAYVFADHSLRNIYYIKMNDDGTWDKGTIISDRSVAVLSFAEDMNGELFIIDSNSEILYLPCGDLCIDPDIPEDDDTASY 508
            CGNNYGW RFEGSRC E  +D     PC  VDRSG T P FEYCH DYDS+ + E E+TGG D CGDR +VGN VIGG+VYRG  F DLL GAY+F D ++RNIY+++  + G W  GTIISD SV ++SFAED+NGE+ ++D    + ++PCGDLC    + + +D  +Y
Sbjct:  288 CGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTYPLFEYCHPDYDSTDADEQEFTGGADTCGDRFVVGNCVIGGYVYRGNFFSDLLDGAYIFGDSTMRNIYFLREEEAG-WAVGTIISDASVQIVSFAEDVNGEIMMLDYQHRMYHMPCGDLCATTCLEQAEDQPTY 457          
BLAST of mRNA_F-distichus_contig10268.236.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 3.240e-49
Identity = 106/273 (38.83%), Postives = 155/273 (56.78%), Query Frame = 2
Query:    2 CGNNYGWVRFEGSRCTEYSEDAYG-PCADVDRSGITPPAFEYCHVDYDSSPSSEDEYTGGNDICGDRSIVGNTVIGGHVYRGQAFFDLLYGAYVFADHSLRNIYYIKMNDDGTWDKGTIISDRSVAVLSFAEDMNGELFIIDSNSEILYLPCGDLCIDPD---------IPEDDDTASYTYLGCYGDNKDRIFSGNSLQQY-AEMTTEFCSGFC---QGSAYFGTQYNRECWCGEATDDPTILGT----TTCNKPCFGDASQICGGTWAMSVY 766
            CG +YGW  FEGSRC +  E   G  C+ +DR+    P FEYCHVDYDSS   ++E+    D CGDR++ G +VIGGHVYRG  + D+L G Y+FADHS+ +++++     G W  GT++S     +  FAE  +GEL+++     I  LPCGDLC   +         +P+ D T ++  +GC+ D + +  + ++       M  E C+ FC   +G+ +FG QY REC+CG   DD    G       C+ PC G  +Q+CGG   M+V+
Sbjct:  421 CGKDYGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPVFEYCHVDYDSS---QEEF----DACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTVLSSIP-KIGGFAEGNDGELYMVGYQGNIYDLPCGDLCESGEEQKEASSACLPQSDTTPTFEEIGCFLDGEPKTMTLSTAPGCDGTMNAEMCASFCATVEGATHFGLQYQRECYCGGEGDDYVQYGDQLDDAECDMPCSGFPTQMCGGRSKMNVF 685          
BLAST of mRNA_F-distichus_contig10268.236.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 2.190e-40
Identity = 82/136 (60.29%), Postives = 98/136 (72.06%), Query Frame = 2
Query:    2 CGNNYGWVRFEGSRCTEYSED-AYGP-CADVDRSGITPPAFEYCHVDYDSSPSSEDEYTGGNDICGDRSIVGNTVIGGHVYRGQAFFDLLYGAYVFADHSLRNIYYIKMNDDGTWDKGTIISDRSVAVLSFAEDMN 403
            CGNNYGW RFEGSRC E  E+  Y P C  VDRSG T P +EYCH DY S    +DE+T G DICGDR ++GN VIGG+VYRG  F DLLYG Y+F D +++NI+Y+    DG W  GTIISD SV ++SFAED+N
Sbjct:  348 CGNNYGWSRFEGSRCQEAVENNEYNPPCDGVDRSGFTFPLYEYCHPDYSSV--GDDEFTAGVDICGDRVLLGNAVIGGYVYRGNFFSDLLYGHYIFGDSTMKNIFYLVKEGDG-WSLGTIISDASVQIISFAEDVN 480          
BLAST of mRNA_F-distichus_contig10268.236.1 vs. uniprot
Match: D7G960_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G960_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 4.860e-34
Identity = 87/265 (32.83%), Postives = 119/265 (44.91%), Query Frame = 2
Query:    2 CGNNYGWVRFEGSRCTEYSEDAY--GPCADVDRSGITPPAFEYCHVDYDSSPSSEDEYTGGNDICGDRSIVGNTVIGGHVYRGQAFFDLLYGAYVFADHSLRNIYYIKMNDDGTWDKGTIISDRSVAVLSFAEDMNGELFIIDSNSEILYLPCGDLCIDPDIPEDDDTASYTYLGCYGDNKDRIFSGNSLQQYAEMTTEFCSGFCQ--GSAYFGTQYNRECWCGEATDDPT---ILGTTTCNKPCFGDASQICGGTWAMSVYEYE 775
            CGNNYGW RFEGSRC E  +D     PC  + RSG T P FEYCH D+DS+ + E ++TGG D CG+R +                                        DDG W  GTIISD S+ ++SFAED +GE+ ++D N  I  +PCG+LC    + + +D  +Y                           E C+  C+  GS + G Q + +C+CG +T D      L +  C   C       CGG   M V+  +
Sbjct:  249 CGNNYGWSRFEGSRCQEAVQDNEFNPPCDGISRSGFTFPLFEYCHPDFDSTDADEQKFTGGADTCGNRFVE--------------------------------------KDDGGWAVGTIISDASIQIISFAEDADGEIMLLDYNHNIYPMPCGNLCATICLDQAEDLPAY---------------------------EICASHCKTLGSTFSGVQNSFQCFCGPSTADYAKHGSLSSDNCEYLCHAHPEDFCGGFSTMEVFRID 448          
BLAST of mRNA_F-distichus_contig10268.236.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 7.060e-23
Identity = 60/166 (36.14%), Postives = 94/166 (56.63%), Query Frame = 2
Query:  296 LRNIYYIKMNDDGTWDKGTIISDRSVAVLSFAEDMNGELFIIDSNSEILYLPCGDLCIDPDIPEDDDTASYTYLGCYGDN-KDR---IFSGNSLQQYAEMTTEFCSGFCQ--GSAYFGTQYNRECWCGEAT---DDPTILGTTTCNKPCFGDASQICGGTWAMSVY 766
            + NIY+++  +DG W  GTIISD SV ++SFAED+NGE+ ++D    + ++PCGDLC    + + +D  +Y  LGCY D+  DR   I   N  +    M+   C+ +C+  GS +FG Q++ +C+CG +T   D    L +  C   C  +    CGG   + V+
Sbjct:  362 IENIYFLREEEDG-WAVGTIISDASVQIVSFAEDVNGEIMLLDYQHNMYHMPCGDLCATTCLDQAEDQPTYESLGCYADDVNDRALPIQGPNCGEGETAMSPAICASYCETLGSTFFGVQFSFQCFCGPSTADYDKHGSLSSDNCEYLCDANPDFFCGGFSTIEVF 526          
BLAST of mRNA_F-distichus_contig10268.236.1 vs. uniprot
Match: A0A6H5KQV8_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV8_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 9.350e-19
Identity = 52/101 (51.49%), Postives = 59/101 (58.42%), Query Frame = 2
Query:  470 DPDIPEDDDTASYTYLGCYGDNKD-RIFSGNSLQQYAEMTTEFCSGFCQGSAYFGTQYNRECWCGEATDDPTILGTTTCNKPCFGDASQICGGTWAMSVYE 769
            D D  E DD +   YLGCY D  D R+F        A MT E CS  C GSAY+GTQY+ ECWCG    D    G   C+ PC GDA +ICGG +AMSVYE
Sbjct:  154 DADDGESDDPS---YLGCYSDPADSRVFVQGVSS--AAMTAEICSAACAGSAYYGTQYSVECWCGAEGADYDANGAGVCDMPCGGDADEICGGFYAMSVYE 249          
BLAST of mRNA_F-distichus_contig10268.236.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.680e-18
Identity = 43/92 (46.74%), Postives = 62/92 (67.39%), Query Frame = 2
Query:  506 YTYLGCYGDNKDRIFSGNSLQQY-AEMTTEFCSGFCQGSAYFGTQYNRECWCGEATDDPTILGTTT-CNKPCFGDASQICGGTWAMSVYEYE 775
            Y++ GCY D+ DR+ SG+S+    + MTT +C+ FC+GS YFG Q+  EC+C  + D P  LG +  C   C GD+S+ICGG++A+ VYEY 
Sbjct:  177 YSFAGCYVDSPDRVLSGDSMMSVNSVMTTAYCADFCEGSDYFGVQFGYECFCSSSGDTPDELGESEDCEMACSGDSSEICGGSYAIQVYEYS 268          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10268.236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6T7_ECTSI3.520e-7148.12WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4P3_ECTSI6.750e-6745.66Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
D7G961_ECTSI1.450e-6043.98Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
A0A6H5KT40_9PHAE1.630e-5355.56GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FJP1_ECTSI3.240e-4938.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZF5_9PHAE2.190e-4060.29GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G960_ECTSI4.860e-3432.83Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
D7G957_ECTSI7.060e-2336.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQV8_9PHAE9.350e-1951.49WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LC73_ECTSI1.680e-1846.74Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10268contigF-distichus_contig10268:2326..5594 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score122.5
Seed ortholog evalue1.8e-25
Seed eggNOG ortholog2880.D7G6T7
KEGG rclassRC00194
KEGG koko:K04618,ko:K08254,ko:K11244,ko:K20929
KEGG ReactionR01098
KEGG Pathwayko00052,ko04011,ko04139,map00052,map04011,map04139
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC1.1.3.9,1.2.3.15,3.2.1.59
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size1618
Cds size471
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10268.236.1prot_F-distichus_contig10268.236.1Fucus distichus monoicouspolypeptideF-distichus_contig10268 3154..4737 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928943.8168285-UTR-F-distichus_contig10268:2325..31531622928943.8168285-UTR-F-distichus_contig10268:2325..3153Fucus distichus monoicousUTRF-distichus_contig10268 2326..3153 -
1690885076.3663504-UTR-F-distichus_contig10268:2325..31531690885076.3663504-UTR-F-distichus_contig10268:2325..3153Fucus distichus monoicousUTRF-distichus_contig10268 2326..3153 -
1622928943.9155552-UTR-F-distichus_contig10268:4737..47561622928943.9155552-UTR-F-distichus_contig10268:4737..4756Fucus distichus monoicousUTRF-distichus_contig10268 4738..4756 -
1690885076.4238417-UTR-F-distichus_contig10268:4737..47561690885076.4238417-UTR-F-distichus_contig10268:4737..4756Fucus distichus monoicousUTRF-distichus_contig10268 4738..4756 -
1622928943.940324-UTR-F-distichus_contig10268:5087..51631622928943.940324-UTR-F-distichus_contig10268:5087..5163Fucus distichus monoicousUTRF-distichus_contig10268 5088..5163 -
1690885076.4325182-UTR-F-distichus_contig10268:5087..51631690885076.4325182-UTR-F-distichus_contig10268:5087..5163Fucus distichus monoicousUTRF-distichus_contig10268 5088..5163 -
1622928943.9667585-UTR-F-distichus_contig10268:5370..55941622928943.9667585-UTR-F-distichus_contig10268:5370..5594Fucus distichus monoicousUTRF-distichus_contig10268 5371..5594 -
1690885076.4415946-UTR-F-distichus_contig10268:5370..55941690885076.4415946-UTR-F-distichus_contig10268:5370..5594Fucus distichus monoicousUTRF-distichus_contig10268 5371..5594 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928943.8391683-CDS-F-distichus_contig10268:3153..32941622928943.8391683-CDS-F-distichus_contig10268:3153..3294Fucus distichus monoicousCDSF-distichus_contig10268 3154..3294 -
1690885076.3794067-CDS-F-distichus_contig10268:3153..32941690885076.3794067-CDS-F-distichus_contig10268:3153..3294Fucus distichus monoicousCDSF-distichus_contig10268 3154..3294 -
1622928943.857525-CDS-F-distichus_contig10268:3616..36731622928943.857525-CDS-F-distichus_contig10268:3616..3673Fucus distichus monoicousCDSF-distichus_contig10268 3617..3673 -
1690885076.390886-CDS-F-distichus_contig10268:3616..36731690885076.390886-CDS-F-distichus_contig10268:3616..3673Fucus distichus monoicousCDSF-distichus_contig10268 3617..3673 -
1622928943.8736463-CDS-F-distichus_contig10268:4155..43441622928943.8736463-CDS-F-distichus_contig10268:4155..4344Fucus distichus monoicousCDSF-distichus_contig10268 4156..4344 -
1690885076.4040723-CDS-F-distichus_contig10268:4155..43441690885076.4040723-CDS-F-distichus_contig10268:4155..4344Fucus distichus monoicousCDSF-distichus_contig10268 4156..4344 -
1622928943.89609-CDS-F-distichus_contig10268:4653..47371622928943.89609-CDS-F-distichus_contig10268:4653..4737Fucus distichus monoicousCDSF-distichus_contig10268 4654..4737 -
1690885076.4148316-CDS-F-distichus_contig10268:4653..47371690885076.4148316-CDS-F-distichus_contig10268:4653..4737Fucus distichus monoicousCDSF-distichus_contig10268 4654..4737 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10268.236.1

>prot_F-distichus_contig10268.236.1 ID=prot_F-distichus_contig10268.236.1|Name=mRNA_F-distichus_contig10268.236.1|organism=Fucus distichus monoicous|type=polypeptide|length=157bp
MNDDGTWDKGTIISDRSVAVLSFAEDMNGELFIIDSNSEILYLPCGDLCI
DPDIPEDDDTASYTYLGCYGDNKDRIFSGNSLQQYAEMTTEFCSGFCQGS
AYFGTQYNRECWCGEATDDPTILGTTTCNKPCFGDASQICGGTWAMSVYE
YEFVTL*
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mRNA from alignment at F-distichus_contig10268:2326..5594-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10268.236.1 ID=mRNA_F-distichus_contig10268.236.1|Name=mRNA_F-distichus_contig10268.236.1|organism=Fucus distichus monoicous|type=mRNA|length=3269bp|location=Sequence derived from alignment at F-distichus_contig10268:2326..5594- (Fucus distichus monoicous)
GTGTGGAAATAACTACGGCTGGGTGCGATTCGAAGGGTCGCGATGCACGG AATACTCGGAGGACGCCTACGGCCCTTGCGCAGATGTTGACCGTTCAGGC ATCACTCCGCCTGCATTCGAGTACTGCCACGTCGACTACGACTCTAGCCC ATCCTCCGAGGATGAGTACACGGGTGGCAACGACATCTGTGGTGATCGGA GTATTGTTGGCAACACGGTCATTGGTGAGCTTGCTATGATAACTGACTCG ATTGGTCGGAGGAGACTGTGCCATTTCGAAATACATTGGGGCAGGAATTG GCTCCAAAATCATGTGAAGTATCAGTCAGTCAAAACGACCGGGGGCGTTT TTCACACTGTGCGTGAATGGACATTTTGTTTAGAACTAAGTGCTTGCATC ACCATTGGTTGACTTGCTATTTCCCCTCCAGGAGGACACGTATACCGAGG GCAAGCGTTCTTTGACCTGTTGTACGGTGCTTATGTCTTCGCCGACCACT CGCTCAGGTCAGTACAATAGTATATGTATATATATAAAGGCACATATATG GCTGCATAAGGGTGCGCCCCCTACGTCGTCCGCGTCCTATTATGCGGTCT CCGAATGTGCACAGTAGAGAATGGAAAAAGTCGCCCAAATGCTGGATCTT CCACTATAATATTAGGGGGGGAAACAGCTTAACGAGTCCGTCCACACTTT TCCACAGAGCTAAATGACCGGTCAGCGCCGACGGAGCATGTGACGCATTG GATGTGTCACCAGATGTAACAGTATTCACCAATTGAGCGTCATGACCCCG TATCCGATCCTTGCCCGCCCACTTGCTTTGCATGTCAGGAATATTTACTA CATCAAGATGAACGACGACGGAACATGGGACAAGGGTACTATCATCAGCG ACCGAAGCGTGGCCGTGTTGTCCTTTGCGGAGGACATGAACGTGAGCCAT AAACTTAGACAACGACATGTGGGGCATTTCCGTTTGGCTCAGGACTTTCT ACCTAAGTTGTTATGGACAAAGAAAGTATTTTGCAATGTGATATAGTCTC CCACCATCATCCATGTATGTACGGTCACACATACAGCAAGAGTATAGATC AACCGGGTAAAGCTGCCAATCTTGCACGTGGTCAGCTGAATGGGGAAAAA TGAAAATTTCCCTGCTCGCGATCGTATCCCTTAGCTATCCTCCACCTTAC GGACCATTTGCGTTACTATTTATCACTGCTTGCCCACCTCGGCGTCGCAG GGGGAGCTGTTCATCATCGACAGCAACAGCGAGATCTTATACCTGCCGTG CGGTGATCTCTGCATAGATCCGGATATACCCGAAGACGACGACACAGCGT CTTACACCTATCTCGGGTGCTACGGTGACAACAAAGATCGTATCTTTTCA GGGAATTCCTTGCAACAGTATGCCGAGATGACCACAGAGGTAAGCCCTGA CTGGGCTTTGGAGTCGAGTCTGTTTTATTTCGTGGGTTAATCGCGCAAGA CCTCGAAAAGCTGGGAGATTTTGAAATATAAAGTATAGCGTTTCTTCTGG ATCAGACTGTAGCGTATCCATCACATGCAAGGTGACGCCATTTATTTTTA TGTCACAGATGGAGCGGTGCATGATAAACGTATGAAGTTCTCTAGTTATG TTGGTAAGTAGTTTTGAGCACAGCGAGAAACCGGTGTAATTGTCGAAACG CCGTTAATGTACAGTGTCTGGTTCATTCTTGCCCCCTAGAGTACCAGATA TTGTGCCCATCGAACAATAAAGACGATTCGACCTAGATCACCTTCCCTCC ACAGCCGAAAATTTACGATGAGCAGCTGTAGCCTTTTTACTGCGATCATA AGGAAACTAACGTACTCAACCGTCCCTCTTCGTCGGAACCTCCTGAATCT CCTACCGTTGGGTGTACTCAGTTTTGTTCTGGGTTCTGCCAGGGATCGGC CTACTTCGGCACCCAGTACAATCGCGAGGTGAGTTACCATCGTCCCGGAA ACCTCCTCGATATGCCAAGGCAGTTTTCCTTTATAGCGCTACGTACACTC TTTTGTGACGGGCTGAATAAGCATGTACTGCCTACAAAACTGTTTCAAAA CCTAGAAGAGGTGGAGCAAGCTGGGGGTTTGAGGTAGAGATCAGGTGACA TAGCTCCGAAAAACACCAGCGAAATGTTGTGGCGACTCTGTGCAGCGCGC GAAGAGCGTCATATAGCCATGATATTTTTAACACCCTTGTCTCCTTTCGC TGCCGTCATCTTCGTGTTTTCGTATTATTAAATCCTTATGTTTTGAGCAG TGTTGGTGCGGAGAAGCGACGGATGATCCTACGATCCTTGGTACTACAAC CTGTAACAAGCCCTGCTTTGGCGATGCATCACAGATTTGCGGTGGAACCT GGGCTATGTCCGTTTACGAGTACGAGTTCGTAACTCTATAATAGTAACTT CGAGACTGGTCATCAGCGAAGTTGTAATAAATAGATTTTGACCTTACTCC TGAAAGGCAAATAAGGGTTTTGGTGCCTGTCTCTACCTATGATGGACTCC TCGTAACCAGCATGTTTTGCCAGTGCCCGCCCCAAGCGGTTGTATTGCCT ACAATCGGTAGGATGTGGTCGGGTCTTGCCGGCATTAGTCGAGTCAAAAA CATCCAGTAGAGCTCGGCATTGTTCTGTCATCTTTTGTACGTTTATATAT TGTTTTTATTTTGTAAAAAAAAAACGGCGGTGCGTGTAAGGCAGTTTTTA CATGCGCGACATAACTTCGCATACGTTGGAGGTGCTTGATACAAGGCCAC GTACATGGACGTTGTCTTTTTGCATTTTCTCCCGAGACCTTGTAACACCA GTTGTTCTCTTAAACCTTTGGGCATTGGCTTTTGATTGATATAAGGGATA TCCAGAAGTAGTTTGGAGCTTACATGAAAACCGCGTTTCATTTTAGGTGG GTGAGCCAGTCTAACTGGCGTTTTTGTTTGTCTGGGGCGAGAATACTGGT ACTACTTTGGCGGTAGCTGCCCCCCAAACCGTCGATTGCATTAACGAGAA ATGAAGATTATATACCGTTACAGGTGGCCAAATTGAAAAAAACAATCGCG ATAAGACTTGTATTTATTATCAAGAAAATCCACATGAACGGGTCGAGCCA GCAAAAAAAAACAACAAATGAGGGAGGAAAGGCGCGGAATCGGTTTTGAA ACCGTCGCTGGCATGGGGGGGAACTATCGTAGAAACACTCAGCGCTGGAA GTGGCTACGCTTCCCACCT
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Coding sequence (CDS) from alignment at F-distichus_contig10268:2326..5594-

>mRNA_F-distichus_contig10268.236.1 ID=mRNA_F-distichus_contig10268.236.1|Name=mRNA_F-distichus_contig10268.236.1|organism=Fucus distichus monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at F-distichus_contig10268:2326..5594- (Fucus distichus monoicous)
ATGAACGACGACGGAACATGGGACAAGGGTACTATCATCAGCGACCGAAG
CGTGGCCGTGTTGTCCTTTGCGGAGGACATGAACATGAACGACGACGGAA
CATGGGACAAGGGTACTATCATCAGCGACCGAAGCGTGGCCGTGTTGTCC
TTTGCGGAGGACATGAACGGGGAGCTGTTCATCATCGACAGCAACAGCGA
GATCTTATACCTGCCGTGCGGTGATCTCTGCATAGATCCGGATATACCCG
AAGACGACGACACAGCGTCTTACACCTATCTCGGGTGCTACGGTGACAAC
AAAGATCGTATCTTTTCAGGGAATTCCTTGCAACAGTATGCCGAGATGAC
CACAGAGGGGGAGCTGTTCATCATCGACAGCAACAGCGAGATCTTATACC
TGCCGTGCGGTGATCTCTGCATAGATCCGGATATACCCGAAGACGACGAC
ACAGCGTCTTACACCTATCTCGGGTGCTACGGTGACAACAAAGATCGTAT
CTTTTCAGGGAATTCCTTGCAACAGTATGCCGAGATGACCACAGAGTTTT
GTTCTGGGTTCTGCCAGGGATCGGCCTACTTCGGCACCCAGTACAATCGC
GAGTTTTGTTCTGGGTTCTGCCAGGGATCGGCCTACTTCGGCACCCAGTA
CAATCGCGAGTGTTGGTGCGGAGAAGCGACGGATGATCCTACGATCCTTG
GTACTACAACCTGTAACAAGCCCTGCTTTGGCGATGCATCACAGATTTGC
GGTGGAACCTGGGCTATGTCCGTTTACGAGTACGAGTTCGTAACTCTATA
ATGTTGGTGCGGAGAAGCGACGGATGATCCTACGATCCTTGGTACTACAA
CCTGTAACAAGCCCTGCTTTGGCGATGCATCACAGATTTGCGGTGGAACC
TGGGCTATGTCCGTTTACGAGTACGAGTTCGTAACTCTATAA
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