mRNA_F-distichus_contig102620.227.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig102620.227.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI) HSP 1 Score: 56.2 bits (134), Expect = 1.470e-7 Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 10 FVAFFSGLVQLLAKTAQGEMMRFCGMRSNLVVIVKSIKFLELVSSNMLAFTNLAICINLALII 198
F + SGLV L + M+ C S+L+ +K++KF+E VSSNM+A T+LAIC+NLALI+
Sbjct: 54 FAHWLSGLVWGLCFVVEDMMVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIV 116
BLAST of mRNA_F-distichus_contig102620.227.1 vs. uniprot
Match: A0A6H5JZY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY2_9PHAE) HSP 1 Score: 55.1 bits (131), Expect = 2.800e-7 Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 19 FFSGLVQLLAKTAQGEMMRFCGMRSNLVVIVKSIKFLELVSSNMLAFTNLAICINLALII 198
F GL+ L Q M+ C +NL+ ++K+ KFLEL S NMLA TNLAICINLAL++
Sbjct: 8 FSCGLLYQLLILMQATMISVCWAGANLIKLIKTFKFLELASVNMLATTNLAICINLALVV 67
BLAST of mRNA_F-distichus_contig102620.227.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI) HSP 1 Score: 54.7 bits (130), Expect = 4.540e-7 Identity = 30/67 (44.78%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 10 FVAFFSGLVQLLAKTAQGEMMRFCGMRSNLVVIVKSIKFLELVSSNMLAFTNLAICINLALIIYVRR 210
F + SGL+ L + M+ C +L ++K++KF EL +SNMLA TNLAIC+NLALI+ R
Sbjct: 80 FSHWLSGLLHQLVFMTEATMVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHR 146
BLAST of mRNA_F-distichus_contig102620.227.1 vs. uniprot
Match: D8LNN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN5_ECTSI) HSP 1 Score: 53.1 bits (126), Expect = 5.810e-7 Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 25 SGLVQLLAKTAQGEMMRFCGMRSNLVVIVKSIKFLELVSSNMLAFTNLAICINLALII 198
SG V L+ + M+ C SNL+ ++K IKFLEL ++NMLA TNL ICINLALI+
Sbjct: 21 SGAVLGLSYLTEDVMVSSCYAASNLLGLIKFIKFLELAAANMLAITNLGICINLALIV 78
BLAST of mRNA_F-distichus_contig102620.227.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI) HSP 1 Score: 52.0 bits (123), Expect = 2.200e-6 Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 1
Query: 58 QGEMMRFCGMRSNLVVIVKSIKFLELVSSNMLAFTNLAICINLALII 198
Q M+ C +NL+ ++K+ KFLEL S NMLA TNLAIC+NLAL++
Sbjct: 2 QATMISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVV 48
BLAST of mRNA_F-distichus_contig102620.227.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI) HSP 1 Score: 52.4 bits (124), Expect = 2.670e-6 Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 67 MMRFCGMRSNLVVIVKSIKFLELVSSNMLAFTNLAICINLALIIYVRR 210
M+ C NL +K++KFLEL +SNMLA TNLAIC+NL+LI+ RR
Sbjct: 1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRR 48
BLAST of mRNA_F-distichus_contig102620.227.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI) HSP 1 Score: 51.2 bits (121), Expect = 8.530e-6 Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 67 MMRFCGMRSNLVVIVKSIKFLELVSSNMLAFTNLAICINLALIIYVRR 210
M+ C SN+ VK++KFLELV+SNMLA TNLAIC NLAL+I R
Sbjct: 1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHR 48
BLAST of mRNA_F-distichus_contig102620.227.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE) HSP 1 Score: 50.4 bits (119), Expect = 1.560e-5 Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 25 SGLVQLLAKTAQGEMMRFCGMRSNLVVIVKSIKFLELVSSNMLAFTNLAICINLALII 198
SG + LA + M+ C +NLV ++K+I F+ + SSNMLA TNL ICINLALI+
Sbjct: 9 SGTLVCLALMTEDVMVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIV 66
BLAST of mRNA_F-distichus_contig102620.227.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE) HSP 1 Score: 50.1 bits (118), Expect = 2.140e-5 Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 58 QGEMMRFCGMRSNLVVIVKSIKFLELVSSNMLAFTNLAICINLALII 198
QG M+ C + L +K++K+LE SSNMLA TNLAICINLAL++
Sbjct: 5 QGTMISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVV 51
BLAST of mRNA_F-distichus_contig102620.227.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI) HSP 1 Score: 49.7 bits (117), Expect = 2.950e-5 Identity = 26/58 (44.83%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 25 SGLVQLLAKTAQGEMMRFCGMRSNLVVIVKSIKFLELVSSNMLAFTNLAICINLALII 198
+G++ L + M+ C NL ++K++KF+EL SS+MLA T+LAIC+NLALI+
Sbjct: 10 TGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIV 67 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102620.227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig102620.227.1 >prot_F-distichus_contig102620.227.1 ID=prot_F-distichus_contig102620.227.1|Name=mRNA_F-distichus_contig102620.227.1|organism=Fucus distichus monoicous|type=polypeptide|length=70bp LCCFVAFFSGLVQLLAKTAQGEMMRFCGMRSNLVVIVKSIKFLELVSSNMback to top mRNA from alignment at F-distichus_contig102620:1765..1974- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig102620.227.1 ID=mRNA_F-distichus_contig102620.227.1|Name=mRNA_F-distichus_contig102620.227.1|organism=Fucus distichus monoicous|type=mRNA|length=210bp|location=Sequence derived from alignment at F-distichus_contig102620:1765..1974- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig102620:1765..1974- >mRNA_F-distichus_contig102620.227.1 ID=mRNA_F-distichus_contig102620.227.1|Name=mRNA_F-distichus_contig102620.227.1|organism=Fucus distichus monoicous|type=CDS|length=420bp|location=Sequence derived from alignment at F-distichus_contig102620:1765..1974- (Fucus distichus monoicous)back to top |