mRNA_F-distichus_contig1026.225.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE) HSP 1 Score: 253 bits (645), Expect = 2.840e-77 Identity = 130/289 (44.98%), Postives = 173/289 (59.86%), Query Frame = 1
Query: 49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
+ WHRRL H+N RS+ +LR+ GV+Y +++S C +C ++K++Q HPK+S+++ E+++ YNM VA G RI+ +R DKGG+ G EF+ N+ I + Y TNTPQQ GVS +DGQTLA RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK DLSGLR IGARAFVH + +K DD AFEGKLCGF DS+ Y + NP+ G VESRN+TF+E+P
Sbjct: 43 DTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDNCKNSAIKLEYAATNTPQQLGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERCRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAGVESRNVTFIESP 331
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE) HSP 1 Score: 258 bits (658), Expect = 3.270e-77 Identity = 131/289 (45.33%), Postives = 175/289 (60.55%), Query Frame = 1
Query: 49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
+ WHRRL H+N RS+ +LR+ GV+Y +++S C +C ++K++Q HPK+S+++ E+++ YNM VA G RI+ +R DKGG+ G EF+ N+ I + Y TNTPQQ GVS +DGQTLA RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK DLSGLR IGARAFVH + + +K DD AFEGKLCGF DS+ Y + NP+ G VVESRN+TF+E+P
Sbjct: 43 DTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESP 331
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE) HSP 1 Score: 257 bits (656), Expect = 7.550e-76 Identity = 131/290 (45.17%), Postives = 175/290 (60.34%), Query Frame = 1
Query: 49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETPA 762
+ WHRRL H+N RS+ +LR+ GV+Y +++S C +C ++K++Q HPK+S+++ E+++ YNM VA G RI+ +R DKGG+ G EF+ N+ I + Y TNTPQQ GVS +DGQTLA RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK DL GLR IGARAFVH + + +K DD AFEGKLCGF DS+ Y + NP+ G VVESRN+TF+E+PA
Sbjct: 239 DTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRSGQLVVIDNMGPANPPAKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIEAIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLLGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESPA 528
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE) HSP 1 Score: 255 bits (651), Expect = 8.970e-76 Identity = 130/289 (44.98%), Postives = 174/289 (60.21%), Query Frame = 1
Query: 49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
+ WHRRL H+N RS+ +LR+ GV+Y +++S C +C ++K++Q HPK+S+++ E+++ YNM VA G RI+ +R DKGG+ G EF+ N+ I + Y TNTPQQ G S +DGQTLA RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK DLSGLR IGARAFVH + + +K DD AFEGKLCGF DS+ Y + NP+ G VVESRN+TF+E+P
Sbjct: 43 DTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGGSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESP 331
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE) HSP 1 Score: 258 bits (658), Expect = 1.280e-75 Identity = 131/289 (45.33%), Postives = 175/289 (60.55%), Query Frame = 1
Query: 49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
+ WHRRL H+N RS+ +LR+ GV+Y +++S C +C ++K++Q HPK+S+++ E+++ YNM VA G RI+ +R DKGG+ G EF+ N+ I + Y TNTPQQ GVS +DGQTLA RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK DLSGLR IGARAFVH + + +K DD AFEGKLCGF DS+ Y + NP+ G VVESRN+TF+E+P
Sbjct: 43 DTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESP 331
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE) HSP 1 Score: 258 bits (658), Expect = 2.070e-75 Identity = 131/289 (45.33%), Postives = 175/289 (60.55%), Query Frame = 1
Query: 49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
+ WHRRL H+N RS+ +LR+ GV+Y +++S C +C ++K++Q HPK+S+++ E+++ YNM VA G RI+ +R DKGG+ G EF+ N+ I + Y TNTPQQ GVS +DGQTLA RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK DLSGLR IGARAFVH + + +K DD AFEGKLCGF DS+ Y + NP+ G VVESRN+TF+E+P
Sbjct: 43 DTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESP 331
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE) HSP 1 Score: 251 bits (640), Expect = 3.460e-73 Identity = 128/289 (44.29%), Postives = 174/289 (60.21%), Query Frame = 1
Query: 49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
+ WHRRL H+N RS+ +LR+ GV++ +++S C +C ++K +Q HPK+S+++ E+++ YN+ VA G RI+ +R DKGG+ G EF+ N+ I + Y TNTPQQ GVS +DGQTLA RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK DLS LR IGARAFVH++ + +K DD AFEGKLCGF DS+ Y + NP+ G VVESRN+TF+E+P
Sbjct: 43 DTWHRRLGHLNARSLDILRKDTGTGVDFRDSLSPCGVCQIAKYKQSPHPKQSTRELSRPGQLVVIDNVGPVNPPAKYNGGSFPYACKITDDYTKVKEVYLLRKKSNTTEAVHTYNICVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSRLRVIGARAFVHQERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESP 331
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.110e-72 Identity = 132/307 (43.00%), Postives = 179/307 (58.31%), Query Frame = 1
Query: 13 VPGVVYAATADG------NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
+ G +AA++ G + WHRRL H+N RS+ LR+ GV+Y +++S C +C ++K++Q HPK+S+++ E+++ YNM VA G RI+ +R DKGG+ G EF+ N+ I + Y TNTPQQ GVS +DGQTLA RCL+K G+FPPS+W EL+ TAAYL NR H ALGGATP+ ++HN+ DLSGLR IGARAFVH + + +K DD AFEGKLCGF DS+ Y + NP+ VVESRN+TF+E P
Sbjct: 366 ISGRNFAASSTGVGLLSADTWHRRLGHLNARSLDTLRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENAGSEFRNYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSSHSALGGATPYSKLHNQSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYWVLNPSNRAVVESRNVTFIEFP 672
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5KF63_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF63_9PHAE) HSP 1 Score: 226 bits (576), Expect = 4.200e-69 Identity = 107/189 (56.61%), Postives = 138/189 (73.02%), Query Frame = 1
Query: 193 PKKSSKDAESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
P+K S E+++ YNM VA G +I+ +R DKGG+ G +F+ N+ I + Y TNTPQQ GVS +DGQTLA RCL+K G+FPPS+W E++ TAAYL NR PH ALGGATP+ ++HNK DLSGLR IGARAFVH + + +K DD AFEGKLCGF DS+ Y + +P+ G VVESRN+TF+E+P
Sbjct: 97 PRKKSDTTEAVHTYNMCVAAAGGYQIETIRCDKGGENTGSDFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGEIMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLDPSNGAVVESRNVTFIESP 285
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5JL01_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL01_9PHAE) HSP 1 Score: 234 bits (596), Expect = 2.180e-67 Identity = 126/295 (42.71%), Postives = 171/295 (57.97%), Query Frame = 1
Query: 31 AATADGNIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSK----------------------------------------------------DAESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
A + ++WHRRL H+NP +M++LRR GV+Y VS CD C ++K+++ PKK+S+ ++++ YNM VA G RI++LR DKGG+ G+E + + I + + VTNTPQ+ GVS +DGQTLA R L++ G+FP +W EL+ TAAYL+NR PH ALGGATP+ +M+N DLS LRAIGARAFVH + + +K DD AFEGKLCG+ PDS+ Y IY K V ESRN+TF+ETP
Sbjct: 228 AMSVSADLWHRRLGHINPSAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAVTNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIETP 521 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig1026.225.1 >prot_F-distichus_contig1026.225.1 ID=prot_F-distichus_contig1026.225.1|Name=mRNA_F-distichus_contig1026.225.1|organism=Fucus distichus monoicous|type=polypeptide|length=111bp MKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRback to top mRNA from alignment at F-distichus_contig1026:21586..22500- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig1026.225.1 ID=mRNA_F-distichus_contig1026.225.1|Name=mRNA_F-distichus_contig1026.225.1|organism=Fucus distichus monoicous|type=mRNA|length=915bp|location=Sequence derived from alignment at F-distichus_contig1026:21586..22500- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig1026:21586..22500- >mRNA_F-distichus_contig1026.225.1 ID=mRNA_F-distichus_contig1026.225.1|Name=mRNA_F-distichus_contig1026.225.1|organism=Fucus distichus monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at F-distichus_contig1026:21586..22500- (Fucus distichus monoicous)back to top |