mRNA_F-distichus_contig1026.225.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig1026.225.1
Unique NamemRNA_F-distichus_contig1026.225.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 2.840e-77
Identity = 130/289 (44.98%), Postives = 173/289 (59.86%), Query Frame = 1
Query:   49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
            + WHRRL H+N RS+ +LR+    GV+Y +++S C +C ++K++Q  HPK+S+++                                                     E+++ YNM VA   G RI+ +R DKGG+  G EF+    N+ I + Y  TNTPQQ GVS +DGQTLA   RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK  DLSGLR IGARAFVH +   +K DD AFEGKLCGF  DS+ Y + NP+ G  VESRN+TF+E+P
Sbjct:   43 DTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDNCKNSAIKLEYAATNTPQQLGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERCRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAGVESRNVTFIESP 331          
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 3.270e-77
Identity = 131/289 (45.33%), Postives = 175/289 (60.55%), Query Frame = 1
Query:   49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
            + WHRRL H+N RS+ +LR+    GV+Y +++S C +C ++K++Q  HPK+S+++                                                     E+++ YNM VA   G RI+ +R DKGG+  G EF+    N+ I + Y  TNTPQQ GVS +DGQTLA   RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK  DLSGLR IGARAFVH + + +K DD AFEGKLCGF  DS+ Y + NP+ G VVESRN+TF+E+P
Sbjct:   43 DTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESP 331          
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 7.550e-76
Identity = 131/290 (45.17%), Postives = 175/290 (60.34%), Query Frame = 1
Query:   49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETPA 762
            + WHRRL H+N RS+ +LR+    GV+Y +++S C +C ++K++Q  HPK+S+++                                                     E+++ YNM VA   G RI+ +R DKGG+  G EF+    N+ I + Y  TNTPQQ GVS +DGQTLA   RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK  DL GLR IGARAFVH + + +K DD AFEGKLCGF  DS+ Y + NP+ G VVESRN+TF+E+PA
Sbjct:  239 DTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRSGQLVVIDNMGPANPPAKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIEAIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLLGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESPA 528          
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 8.970e-76
Identity = 130/289 (44.98%), Postives = 174/289 (60.21%), Query Frame = 1
Query:   49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
            + WHRRL H+N RS+ +LR+    GV+Y +++S C +C ++K++Q  HPK+S+++                                                     E+++ YNM VA   G RI+ +R DKGG+  G EF+    N+ I + Y  TNTPQQ G S +DGQTLA   RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK  DLSGLR IGARAFVH + + +K DD AFEGKLCGF  DS+ Y + NP+ G VVESRN+TF+E+P
Sbjct:   43 DTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGGSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESP 331          
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 1.280e-75
Identity = 131/289 (45.33%), Postives = 175/289 (60.55%), Query Frame = 1
Query:   49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
            + WHRRL H+N RS+ +LR+    GV+Y +++S C +C ++K++Q  HPK+S+++                                                     E+++ YNM VA   G RI+ +R DKGG+  G EF+    N+ I + Y  TNTPQQ GVS +DGQTLA   RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK  DLSGLR IGARAFVH + + +K DD AFEGKLCGF  DS+ Y + NP+ G VVESRN+TF+E+P
Sbjct:   43 DTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESP 331          
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 2.070e-75
Identity = 131/289 (45.33%), Postives = 175/289 (60.55%), Query Frame = 1
Query:   49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
            + WHRRL H+N RS+ +LR+    GV+Y +++S C +C ++K++Q  HPK+S+++                                                     E+++ YNM VA   G RI+ +R DKGG+  G EF+    N+ I + Y  TNTPQQ GVS +DGQTLA   RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK  DLSGLR IGARAFVH + + +K DD AFEGKLCGF  DS+ Y + NP+ G VVESRN+TF+E+P
Sbjct:   43 DTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESP 331          
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 3.460e-73
Identity = 128/289 (44.29%), Postives = 174/289 (60.21%), Query Frame = 1
Query:   49 NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
            + WHRRL H+N RS+ +LR+    GV++ +++S C +C ++K +Q  HPK+S+++                                                     E+++ YN+ VA   G RI+ +R DKGG+  G EF+    N+ I + Y  TNTPQQ GVS +DGQTLA   RCL+K G+FPPS+W EL+ TAAYL NR PH ALGGATP+ ++HNK  DLS LR IGARAFVH++ + +K DD AFEGKLCGF  DS+ Y + NP+ G VVESRN+TF+E+P
Sbjct:   43 DTWHRRLGHLNARSLDILRKDTGTGVDFRDSLSPCGVCQIAKYKQSPHPKQSTRELSRPGQLVVIDNVGPVNPPAKYNGGSFPYACKITDDYTKVKEVYLLRKKSNTTEAVHTYNICVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSRLRVIGARAFVHQERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESP 331          
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 1.110e-72
Identity = 132/307 (43.00%), Postives = 179/307 (58.31%), Query Frame = 1
Query:   13 VPGVVYAATADG------NIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSKD----------------------------------------------------AESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
            + G  +AA++ G      + WHRRL H+N RS+  LR+    GV+Y +++S C +C ++K++Q  HPK+S+++                                                     E+++ YNM VA   G RI+ +R DKGG+  G EF+    N+ I + Y  TNTPQQ GVS +DGQTLA   RCL+K G+FPPS+W EL+ TAAYL NR  H ALGGATP+ ++HN+  DLSGLR IGARAFVH + + +K DD AFEGKLCGF  DS+ Y + NP+   VVESRN+TF+E P
Sbjct:  366 ISGRNFAASSTGVGLLSADTWHRRLGHLNARSLDTLRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENAGSEFRNYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSSHSALGGATPYSKLHNQSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYWVLNPSNRAVVESRNVTFIEFP 672          
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5KF63_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF63_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 4.200e-69
Identity = 107/189 (56.61%), Postives = 138/189 (73.02%), Query Frame = 1
Query:  193 PKKSSKDAESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
            P+K S   E+++ YNM VA   G +I+ +R DKGG+  G +F+    N+ I + Y  TNTPQQ GVS +DGQTLA   RCL+K G+FPPS+W E++ TAAYL NR PH ALGGATP+ ++HNK  DLSGLR IGARAFVH + + +K DD AFEGKLCGF  DS+ Y + +P+ G VVESRN+TF+E+P
Sbjct:   97 PRKKSDTTEAVHTYNMCVAAAGGYQIETIRCDKGGENTGSDFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGEIMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLDPSNGAVVESRNVTFIESP 285          
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Match: A0A6H5JL01_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL01_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 2.180e-67
Identity = 126/295 (42.71%), Postives = 171/295 (57.97%), Query Frame = 1
Query:   31 AATADGNIWHRRLEHMNPRSMKLLRRKERNGVEYTETVSNCDICALSKNRQQKHPKKSSK----------------------------------------------------DAESMYQYNMTVAVPLGLRIQILRFDKGGKYIGKEFKTLSVNADINVVYTVTNTPQQNGVS*KDGQTLAQTIRCLMKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLRAIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESRNMTFLETP 759
            A +   ++WHRRL H+NP +M++LRR    GV+Y   VS CD C ++K+++   PKK+S+                                                      ++++ YNM VA   G RI++LR DKGG+  G+E +     + I + + VTNTPQ+ GVS +DGQTLA   R L++ G+FP  +W EL+ TAAYL+NR PH ALGGATP+ +M+N   DLS LRAIGARAFVH + + +K DD AFEGKLCG+ PDS+ Y IY   K  V ESRN+TF+ETP
Sbjct:  228 AMSVSADLWHRRLGHINPSAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTETTQALHAYNMQVASE-GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAVTNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYKKKLDDRAFEGKLCGYGPDSKTYRIYVEGKDKVYESRNVTFIETP 521          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1026.225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCM0_9PHAE2.840e-7744.98Integrase catalytic domain-containing protein n=5 ... [more]
A0A6H5K500_9PHAE3.270e-7745.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JSL6_9PHAE7.550e-7645.17Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K1R7_9PHAE8.970e-7644.98Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JJR8_9PHAE1.280e-7545.33Integrase catalytic domain-containing protein n=11... [more]
A0A6H5KCT3_9PHAE2.070e-7545.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRJ1_9PHAE3.460e-7344.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J8P7_9PHAE1.110e-7243.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF63_9PHAE4.200e-6956.61Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JL01_9PHAE2.180e-6742.71Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig1026contigF-distichus_contig1026:21586..22500 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score72.0
Seed ortholog evalue2e-10
Seed eggNOG ortholog35725.K2RFY9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Encoded by
EggNOG OGs39W4B@33154,3P15U@4751,3QR1M@4890,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelAscomycota
Best eggNOG OGNA|NA|NA
Exons2
Model size768
Cds size333
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig1026.225.1prot_F-distichus_contig1026.225.1Fucus distichus monoicouspolypeptideF-distichus_contig1026 21586..21918 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928942.9246135-CDS-F-distichus_contig1026:21585..219181622928942.9246135-CDS-F-distichus_contig1026:21585..21918Fucus distichus monoicousCDSF-distichus_contig1026 21586..21918 -
1690885076.0207531-CDS-F-distichus_contig1026:21585..219181690885076.0207531-CDS-F-distichus_contig1026:21585..21918Fucus distichus monoicousCDSF-distichus_contig1026 21586..21918 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928942.9394267-UTR-F-distichus_contig1026:21918..221491622928942.9394267-UTR-F-distichus_contig1026:21918..22149Fucus distichus monoicousUTRF-distichus_contig1026 21919..22149 -
1690885076.0333924-UTR-F-distichus_contig1026:21918..221491690885076.0333924-UTR-F-distichus_contig1026:21918..22149Fucus distichus monoicousUTRF-distichus_contig1026 21919..22149 -
1622928942.9588468-UTR-F-distichus_contig1026:22296..225001622928942.9588468-UTR-F-distichus_contig1026:22296..22500Fucus distichus monoicousUTRF-distichus_contig1026 22297..22500 -
1690885076.0427043-UTR-F-distichus_contig1026:22296..225001690885076.0427043-UTR-F-distichus_contig1026:22296..22500Fucus distichus monoicousUTRF-distichus_contig1026 22297..22500 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig1026.225.1

>prot_F-distichus_contig1026.225.1 ID=prot_F-distichus_contig1026.225.1|Name=mRNA_F-distichus_contig1026.225.1|organism=Fucus distichus monoicous|type=polypeptide|length=111bp
MKYGNFPPSLWEELIFTAAYLSNRPPHLALGGATPFFRMHNKDADLSGLR
AIGARAFVHRKTWTRKPDDGAFEGKLCGFSPDSRAYMIYNPAKGTVVESR
NMTFLETPAYN
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mRNA from alignment at F-distichus_contig1026:21586..22500-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig1026.225.1 ID=mRNA_F-distichus_contig1026.225.1|Name=mRNA_F-distichus_contig1026.225.1|organism=Fucus distichus monoicous|type=mRNA|length=915bp|location=Sequence derived from alignment at F-distichus_contig1026:21586..22500- (Fucus distichus monoicous)
TTCCACGACGATGTACCTGGGGTCGTTTACGCCGCCACAGCTGACGGCAA CATCTGGCACCGAAGACTAGAACACATGAATCCCCGCAGCATGAAATTAC TTCGCCGAAAGGAAAGAAATGGGGTGGAGTACACCGAGACCGTATCCAAC TGCGACATCTGTGCCCTGTCGAAGAACAGACAACAGAAGCACCCCAAGAA GAGTGTGTGGATGACCACCAGGCCGATGCAACGTATCTACACCGACTTCA TGGGACCATTCACGCCTCCTGCGAAAGGAGGATACGTGTACGTCAGCAAG TTCACTGACGACTACTCATGCATGAAGAAAGGCTACCTGGCCAGGAACAA GTCCAAAGACGCCGAGTCGATGTACCAGTACAACATGACCGTGGCCGTCC CTCTAGGACTCCGTATCCAGATCCTCAGGTTTGACAAGGGCGGCAAGTAC ATCGGAAAGGAGTTCAAGACTCTGTCCGTCAACGCCGACATCAACGTCGT GTACACCGTGACCAATACGCCACAGCAGAACGGGGTATCTTAGAAGGATG GACAGACACTGGCCCAGACCATCCGATGCTTGATGAAGTATGGGAACTTC CCGCCGTCGCTGTGGGAAGAGCTAATTTTCACGGCGGCATACTTGTCCAA CAGGCCACCTCACTTAGCGCTGGGAGGAGCCACGCCGTTCTTCAGGATGC ACAACAAAGATGCAGACCTCTCGGGACTGCGAGCCATCGGAGCCCGAGCA TTCGTCCACCGCAAGACCTGGACGAGGAAGCCGGACGACGGGGCGTTCGA AGGAAAGCTGTGCGGATTCAGTCCAGACAGTAGAGCCTACATGATCTACA ACCCAGCCAAGGGGACGGTCGTTGAAAGCCGCAACATGACCTTTTTGGAG ACGCCGGCATACAAC
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Coding sequence (CDS) from alignment at F-distichus_contig1026:21586..22500-

>mRNA_F-distichus_contig1026.225.1 ID=mRNA_F-distichus_contig1026.225.1|Name=mRNA_F-distichus_contig1026.225.1|organism=Fucus distichus monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at F-distichus_contig1026:21586..22500- (Fucus distichus monoicous)
ATGAAGTATGGGAACTTCCCGCCGTCGCTGTGGGAAGAGCTAATTTTCAC
GGCGGCATACTTGTCCAACAGGCCACCTCACTTAGCGCTGGGAGGAGCCA
CGCCGTTCTTCAGGATGCACAACAAAGATGCAGACCTCTCGGGACTGCGA
GCCATCGGAGCCCGAGCATTCGTCCACCGCAAGACCTGGACGAGGAAGCC
GGACGACGGGGCGTTCGAAGGAAAGCTGTGCGGATTCAGTCCAGACAGTA
GAGCCTACATGATCTACAACCCAGCCAAGGGGACGGTCGTTGAAAGCCGC
AACATGACCTTTTTGGAGACGCCGGCATACAACATGAAGTATGGGAACTT
CCCGCCGTCGCTGTGGGAAGAGCTAATTTTCACGGCGGCATACTTGTCCA
ACAGGCCACCTCACTTAGCGCTGGGAGGAGCCACGCCGTTCTTCAGGATG
CACAACAAAGATGCAGACCTCTCGGGACTGCGAGCCATCGGAGCCCGAGC
ATTCGTCCACCGCAAGACCTGGACGAGGAAGCCGGACGACGGGGCGTTCG
AAGGAAAGCTGTGCGGATTCAGTCCAGACAGTAGAGCCTACATGATCTAC
AACCCAGCCAAGGGGACGGTCGTTGAAAGCCGCAACATGACCTTTTTGGA
GACGCCGGCATACAAC
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