mRNA_F-distichus_contig10254.220.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10254.220.1
Unique NamemRNA_F-distichus_contig10254.220.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10254.220.1 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 1.210e-121
Identity = 191/214 (89.25%), Postives = 200/214 (93.46%), Query Frame = 1
Query:    4 GFGFVNFEEHESAVKAIDTFNGTEMPDGEGTTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSG-QSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG-MPPRGLPMA--GQGMYSMPYWMGAQPGMPQQPRQYMVPHMMPRGPRGPMP 633
            GFGFVNFEEHESAVKAI+  N  EMPDGEGTTTLYCARAQKKSER RELQSKH+QVKMERMNKFQGVNVYVKNLDEGVT+D MREAF+PYGTITSARVMVDN++  QSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG MPPRG+PMA   QGMY MPYWMGAQPGMPQQPRQ+M+P MMPRGPRGPMP
Sbjct:  274 GFGFVNFEEHESAVKAIEALNNAEMPDGEGTTTLYCARAQKKSERARELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAPGAQGMYGMPYWMGAQPGMPQQPRQFMMPQMMPRGPRGPMP 487          
BLAST of mRNA_F-distichus_contig10254.220.1 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA)

HSP 1 Score: 229 bits (583), Expect = 7.410e-68
Identity = 134/218 (61.47%), Postives = 161/218 (73.85%), Query Frame = 1
Query:    1 RGFGFVNFEEHESAVKAIDTFNG-TEMPDGEGTTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPPRGLPMAGQ--GMYSM--PYWMGAQPG-MPQQPRQY---MVPHMMPRGPRG 624
            RGFGF+NFE+HE+A  A+   NG T       T  L+C RAQK++ERQRELQ+K+E +K+ERMNK+QGVN+YVKNLDE V +  +REAF+  GTITS R+M D  +G SKGFGFVCFS+PEEATKA+ EMN +M+ +KPIYVALAQR+EVRR QLEAQ+AQ R G+ PRG PM     GMY M  PY M  QPG MPQ PR     M+P MM  GPRG
Sbjct:  282 RGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRG-PMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMM--GPRG 496          
BLAST of mRNA_F-distichus_contig10254.220.1 vs. uniprot
Match: A0A6A3LR95_9STRA (Polyadenylate-binding protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LR95_9STRA)

HSP 1 Score: 227 bits (578), Expect = 4.210e-67
Identity = 135/218 (61.93%), Postives = 163/218 (74.77%), Query Frame = 1
Query:    1 RGFGFVNFEEHESAVKAIDTFNGTEMPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMVPH-MMPRG-PRGPMP 633
            RGFGFVN+E+ ESA KA+D  NG   P GEG  T +Y  +AQK+SER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ +TDD +REAF+  GTITS+RVM D  +G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ AQ R GM   RG+PM    MY        QPG MP Q RQ +M P  MMPRG  RGP+P
Sbjct:  297 RGFGFVNYEDSESAHKAVDALNGKSYPAGEGLETEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLTDDELREAFAECGTITSSRVMRD-PNGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQQRAGMVVGRGMPMGQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIP 513          
BLAST of mRNA_F-distichus_contig10254.220.1 vs. uniprot
Match: D0RMB6_PHYIT (Polyadenylate-binding protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0RMB6_PHYIT)

HSP 1 Score: 224 bits (572), Expect = 6.310e-67
Identity = 133/218 (61.01%), Postives = 163/218 (74.77%), Query Frame = 1
Query:    1 RGFGFVNFEEHESAVKAIDTFNGTEMPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMVPH-MMPRG-PRGPMP 633
            RGFGFVN+EE ++A KA+D  NG   P GEG  T +Y  +AQK+SER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ ++DD +REAF+  GTITS+RVM D  +G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ AQ R GM   RG+PM    MY        QPG +P Q RQ +M P  MMPRG  RGPMP
Sbjct:  210 RGFGFVNYEESDAAHKAVDALNGKSYPAGEGLDTEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAFAECGTITSSRVMRD-PNGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQQRAGMVVGRGMPMGQPPMYGAAPMFYGQPGQLPPQARQGFMYPQQMMPRGVQRGPMP 426          
BLAST of mRNA_F-distichus_contig10254.220.1 vs. uniprot
Match: A0A7S2V0G2_9STRA (Polyadenylate-binding protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G2_9STRA)

HSP 1 Score: 222 bits (565), Expect = 1.840e-65
Identity = 121/208 (58.17%), Postives = 158/208 (75.96%), Query Frame = 1
Query:    4 GFGFVNFEEHESAVKAIDTFNGTEM--PDGEGTTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG-MPPRGLPMAGQGMYSMPYWMGAQPGM---PQQPRQY-MVPHMM 606
            G+GFVN+ +HESAVKA++  NG ++  PDGE    +Y  RAQKK+ER+REL++K E +K ER+NK+QGVN+YVKNLD+ +TD+ +RE F+ YGTITSARVM D+ +G S+GFGFVC+SAPEEATKA++E NGK++  KP+Y+ALAQRREVRR QLEAQ+A+  G +PPRG+P+   GMY         PG    PQ  R Y M+P MM
Sbjct:  246 GYGFVNYADHESAVKAVEAMNGLKLKHPDGE-EREMYAGRAQKKAERERELRAKFESLKAERINKYQGVNLYVKNLDDSITDEGLREEFTAYGTITSARVMRDS-NGNSRGFGFVCYSAPEEATKAVSEANGKLINGKPVYIALAQRREVRRAQLEAQYARSVGGLPPRGIPLGQPGMYGAMPMYAMPPGQGIPPQASRGYPMMPAMM 451          
BLAST of mRNA_F-distichus_contig10254.220.1 vs. uniprot
Match: M4B4S0_HYAAE (Polyadenylate-binding protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=M4B4S0_HYAAE)

HSP 1 Score: 219 bits (559), Expect = 1.220e-64
Identity = 129/218 (59.17%), Postives = 163/218 (74.77%), Query Frame = 1
Query:    1 RGFGFVNFEEHESAVKAIDTFNGTEMPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMVPH-MMPRG-PRGPMP 633
            RGFGFVN+++ +SA +A+D  NG   P G+G  T +Y  +AQK++ER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ ++DD +REAF   GTITS+RVM D  +G S+GFGFVCFS PEEA KA+ EMNGK+++ KP+YVALAQR+EVRR QLEAQ AQ R GM   RG+PM    MY        QPG MP Q RQ +M P  MMPRG  RGP+P
Sbjct:  256 RGFGFVNYDDSDSAHRAVDALNGKAYPVGDGVETDIYVGKAQKRTERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAFVECGTITSSRVMRD-PNGNSRGFGFVCFSTPEEANKAVAEMNGKLIVGKPVYVALAQRKEVRRAQLEAQHAQQRAGMAMGRGMPMGQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIP 472          
BLAST of mRNA_F-distichus_contig10254.220.1 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN)

HSP 1 Score: 216 bits (549), Expect = 3.260e-63
Identity = 119/201 (59.20%), Postives = 150/201 (74.63%), Query Frame = 1
Query:    1 RGFGFVNFEEHESAVKAIDTFNGT--EMPDGEGTTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLPMAGQGMYSMPYWMGAQPG-MPQQPRQYMV 594
            +GFGFVNFE+ E A KA++  NG   + PDG     LY  RAQK+SER+REL++K EQ+KMER++K+QGVN+YVKNLD+ +TD+ +REAF  +GTITS+R+M D T+G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ AQR G+  RG+PM    MY       AQP  +P Q RQ  V
Sbjct:  245 KGFGFVNFEKSEGAHKAVEALNGKVYKNPDG-SDVELYVGRAQKRSERERELRNKFEQLKMERLSKYQGVNLYVKNLDDQLTDEELREAFGSFGTITSSRIMRD-TAGVSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQRAGLMGRGIPMGQPPMYGAAPMFYAQPNQLPPQARQGFV 443          
BLAST of mRNA_F-distichus_contig10254.220.1 vs. uniprot
Match: A0A6G0WN78_9STRA (Polyadenylate-binding protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WN78_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.000e-61
Identity = 129/220 (58.64%), Postives = 159/220 (72.27%), Query Frame = 1
Query:    1 RGFGFVNFEEHESAVKAIDTFNGTEMPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR--TGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQYMV--PHMMPRG--PRGPMP 633
            RGFGFVNFEE E+A +A +  N   +   +G    LY  +AQK+SER+REL+ K E +KMER+NK+QGVN+YVKNLD+ +TD+ +REAF+P GTITS R+M D  +G S+GFGFVCF+ PEEATKA+TEM+GK++  KPIYVALAQR+EVRR QLEAQ AQ+  TGM   RG+PM    MY       AQP  MP Q RQ  V    MMPRG  PRGP+P
Sbjct:  291 RGFGFVNFEEPEAAREACEKLNNKVVSTEDGVEIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFAPVGTITSCRIMRD-PAGNSRGFGFVCFATPEEATKAVTEMSGKLISGKPIYVALAQRKEVRRAQLEAQHAQQRATGMVVGRGMPMQQPPMYGAAPMFYAQPNQMPPQARQGFVYPQQMMPRGGLPRGPIP 509          
BLAST of mRNA_F-distichus_contig10254.220.1 vs. uniprot
Match: K3X8Z0_GLOUD (Polyadenylate-binding protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8Z0_GLOUD)

HSP 1 Score: 209 bits (532), Expect = 1.050e-60
Identity = 124/211 (58.77%), Postives = 151/211 (71.56%), Query Frame = 1
Query:    1 RGFGFVNFEEHESAVKAIDTFNGTEMPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFA-QRTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQYMV--PHMMPRG 615
            RGFGFVNFEE E A KA++  NG      +G+   LY  +AQK+SER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ + DD +REAF+  GTITS+RVM D  +G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ A QR G+   RGLPM    MY        QP  MP Q RQ  V    M+PRG
Sbjct:  250 RGFGFVNFEESEGAHKAVEALNGKVYQTADGSDLELYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLNDDELREAFASAGTITSSRVMRDQ-NGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAHQRAGLVVGRGLPMGQPPMYGAAPMFYTQPNQMPPQARQGFVYPQQMLPRG 459          
BLAST of mRNA_F-distichus_contig10254.220.1 vs. uniprot
Match: A0A6U3UAG5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3UAG5_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.530e-60
Identity = 117/201 (58.21%), Postives = 147/201 (73.13%), Query Frame = 1
Query:    4 GFGFVNFEEHESAVKAIDTFNGTE---MPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLP-----MAGQGMYSMPYWMGAQPGMPQQP 579
            GFGFV+F EH++AV A++  NG E   M +GE  +  LY  RAQKK+ER+REL++K+E  KM+R++KFQGVN+YVKNLD+ VTDD +R+ FS  GTITSARVM D   GQS+GFGFVC++ PEEAT+A+ EMNGK+L NKPI+VALAQRREVRR QLEAQ   R G P +G P     M G  M +   + GA P   Q+P
Sbjct:    2 GFGFVSFMEHDAAVDAVEALNGMEFKTMMNGEEVSQELYVGRAQKKAERERELRAKYEAEKMDRISKFQGVNLYVKNLDDTVTDDILRDEFSQMGTITSARVMKDLKDGQSRGFGFVCYATPEEATRAVNEMNGKLLANKPIFVALAQRREVRRAQLEAQHNSR-GQPQQGQPGQPGMMRGGPMGAXXXYPGAMPMYMQRP 201          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10254.220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD5_ECTSI1.210e-12189.25Polyadenylate-binding protein n=2 Tax=Ectocarpus T... [more]
A0A835YVH9_9STRA7.410e-6861.47Polyadenylate-binding protein n=1 Tax=Tribonema mi... [more]
A0A6A3LR95_9STRA4.210e-6761.93Polyadenylate-binding protein n=5 Tax=Phytophthora... [more]
D0RMB6_PHYIT6.310e-6761.01Polyadenylate-binding protein n=1 Tax=Phytophthora... [more]
A0A7S2V0G2_9STRA1.840e-6558.17Polyadenylate-binding protein n=2 Tax=Fibrocapsa j... [more]
M4B4S0_HYAAE1.220e-6459.17Polyadenylate-binding protein n=19 Tax=Peronospora... [more]
A0A2D4BDJ5_PYTIN3.260e-6359.20Polyadenylate-binding protein n=2 Tax=Pythium TaxI... [more]
A0A6G0WN78_9STRA2.000e-6158.64Polyadenylate-binding protein n=2 Tax=Aphanomyces ... [more]
K3X8Z0_GLOUD1.050e-6058.77Polyadenylate-binding protein n=2 Tax=Pythiaceae T... [more]
A0A6U3UAG5_9STRA1.530e-6058.21Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10254contigF-distichus_contig10254:1339..2730 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.1
Seed ortholog evalue1.7e-100
Seed eggNOG ortholog2880.D8LTD5
Preferred namePAB1
KEGG koko:K13126
KEGG Pathwayko03013,ko03015,ko03018,map03013,map03015,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0003727,GO:0003729,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005737,GO:0005840,GO:0006403,GO:0006405,GO:0006406,GO:0006417,GO:0006446,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008143,GO:0008150,GO:0008152,GO:0008428,GO:0009889,GO:0009894,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010608,GO:0015031,GO:0015833,GO:0015931,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031326,GO:0031329,GO:0031503,GO:0032268,GO:0032991,GO:0033036,GO:0034248,GO:0034613,GO:0035770,GO:0036464,GO:0042886,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044092,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0051028,GO:0051168,GO:0051169,GO:0051171,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051252,GO:0051641,GO:0051649,GO:0060211,GO:0060255,GO:0061013,GO:0065007,GO:0065009,GO:0070717,GO:0070727,GO:0071014,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0097159,GO:0098772,GO:1900151,GO:1901363,GO:1903311,GO:1990841,GO:1990904,GO:2000112
EggNOG free text desc.RNA binding
EggNOG OGsKOG0123@1,KOG0123@2759
Ec32 ortholog descriptionpoly(A) binding protein
Ec32 orthologEc-02_005930.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03041
Exons2
Model size633
Cds size633
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928942.5128098-CDS-F-distichus_contig10254:1338..14101622928942.5128098-CDS-F-distichus_contig10254:1338..1410Fucus distichus monoicousCDSF-distichus_contig10254 1339..1410 +
1690885075.8810837-CDS-F-distichus_contig10254:1338..14101690885075.8810837-CDS-F-distichus_contig10254:1338..1410Fucus distichus monoicousCDSF-distichus_contig10254 1339..1410 +
1622928942.5264676-CDS-F-distichus_contig10254:2169..27301622928942.5264676-CDS-F-distichus_contig10254:2169..2730Fucus distichus monoicousCDSF-distichus_contig10254 2170..2730 +
1690885075.897727-CDS-F-distichus_contig10254:2169..27301690885075.897727-CDS-F-distichus_contig10254:2169..2730Fucus distichus monoicousCDSF-distichus_contig10254 2170..2730 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10254.220.1prot_F-distichus_contig10254.220.1Fucus distichus monoicouspolypeptideF-distichus_contig10254 1339..2730 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10254.220.1

>prot_F-distichus_contig10254.220.1 ID=prot_F-distichus_contig10254.220.1|Name=mRNA_F-distichus_contig10254.220.1|organism=Fucus distichus monoicous|type=polypeptide|length=211bp
RGFGFVNFEEHESAVKAIDTFNGTEMPDGEGTTTLYCARAQKKSERQREL
QSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVM
VDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVR
RTQLEAQFAQRTGMPPRGLPMAGQGMYSMPYWMGAQPGMPQQPRQYMVPH
MMPRGPRGPMP
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mRNA from alignment at F-distichus_contig10254:1339..2730+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10254.220.1 ID=mRNA_F-distichus_contig10254.220.1|Name=mRNA_F-distichus_contig10254.220.1|organism=Fucus distichus monoicous|type=mRNA|length=1392bp|location=Sequence derived from alignment at F-distichus_contig10254:1339..2730+ (Fucus distichus monoicous)
CGCGGCTTTGGCTTCGTGAACTTCGAAGAGCATGAATCCGCCGTCAAGGC CATCGACACCTTTAACGGCACCGTGAGTTCGATGAGGGGGGGGGGCGTTT GCGTCCTTGTAGTGCTGAGCATTGTTTTCTCTATGAATAGATTGGAAATC CATAAGGTAAAAGGTGTTCTTGACCAAGGCTCTCGCCCAAGCGTGGGTTA CCGTCCACGATATCTGATGGAAGTGCCAGTGTTCGCCGTATTTGTACCGA CCATCCGCCGGTTCGGTGTTGCTTGTATTTTTTGTTGTTACGAAGCTATA TGATATTGTTAAGAGTAGTGTTTCGCTGTCTCACGACGCATCCAACCGGT CCCCATTGGGGGCGAGCCGCCATCTGACCTCAGGGCTCGACCCCAAGTGT GACACGGGAGAGTAAACATCGCTGAAATTCATGGCCAGGGCCTTTACAAC GCATCACTTATTCTGGTAGTGCCCTCTTACACCGGCGAAACATGCCATCA GTCCTAAAAACTAGGAGCAAATAGCCACCGAAACCTTGGTGGATGAGCGT TCTTTTCCTTCTTGATATTGAAACTGATTAAAGTTTTCCATAGGCAGCGT CATTGAGACAACTTCGCTTCCTTCAGTTGTTCTCTAGTTATTGATTAATC TTCTTGGTAAACTCATTATAGAGATTTCAACCAAAGGTGCGCAGGGGATA CCTCTTTAAAAAACAGTCTTTTGTTTGCGAGCTTCAGGTATGTCCTGTTA TTAGGATTCCCGCTTTATTCACATACTGCCTGCACAACATTGTACCTCAC TTACTATCGCCCTCGCGGGCGACAACCTCAGGAGATGCCGGACGGTGAAG GCACCACGACGCTGTATTGCGCGCGCGCCCAGAAGAAGAGTGAGCGCCAG CGCGAGCTGCAGTCGAAGCACGAGCAAGTGAAGATGGAGCGCATGAACAA GTTCCAGGGCGTTAACGTATACGTGAAGAACCTGGACGAGGGCGTGACGG ATGACACCATGCGCGAGGCGTTTTCCCCTTACGGTACTATCACCAGCGCT CGCGTCATGGTGGACAACACCTCCGGCCAGAGCAAGGGTTTCGGGTTTGT GTGCTTTTCTGCCCCCGAAGAGGCGACGAAGGCCATAACGGAGATGAACG GGAAGATGCTTCTGAACAAGCCCATCTATGTTGCCCTAGCCCAGCGCCGG GAGGTGCGCCGCACCCAGCTGGAGGCTCAGTTCGCCCAACGCACAGGCAT GCCTCCTCGCGGCCTGCCCATGGCCGGCCAGGGCATGTACAGCATGCCGT ATTGGATGGGCGCGCAACCCGGTATGCCGCAGCAGCCCAGGCAATACATG GTGCCGCACATGATGCCTAGGGGGCCTCGTGGGCCCATGCCT
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Coding sequence (CDS) from alignment at F-distichus_contig10254:1339..2730+

>mRNA_F-distichus_contig10254.220.1 ID=mRNA_F-distichus_contig10254.220.1|Name=mRNA_F-distichus_contig10254.220.1|organism=Fucus distichus monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at F-distichus_contig10254:1339..2730+ (Fucus distichus monoicous)
CGCGGCTTTGGCTTCGTGAACTTCGAAGAGCATGAATCCGCCGTCAAGGC
CATCGACACCTTTAACGGCACCCGCGGCTTTGGCTTCGTGAACTTCGAAG
AGCATGAATCCGCCGTCAAGGCCATCGACACCTTTAACGGCACCGAGATG
CCGGACGGTGAAGGCACCACGACGCTGTATTGCGCGCGCGCCCAGAAGAA
GAGTGAGCGCCAGCGCGAGCTGCAGTCGAAGCACGAGCAAGTGAAGATGG
AGCGCATGAACAAGTTCCAGGGCGTTAACGTATACGTGAAGAACCTGGAC
GAGGGCGTGACGGATGACACCATGCGCGAGGCGTTTTCCCCTTACGGTAC
TATCACCAGCGCTCGCGTCATGGTGGACAACACCTCCGGCCAGAGCAAGG
GTTTCGGGTTTGTGTGCTTTTCTGCCCCCGAAGAGGCGACGAAGGCCATA
ACGGAGATGAACGGGAAGATGCTTCTGAACAAGCCCATCTATGTTGCCCT
AGCCCAGCGCCGGGAGGTGCGCCGCACCCAGCTGGAGGCTCAGTTCGCCC
AACGCACAGGCATGCCTCCTCGCGGCCTGCCCATGGCCGGCCAGGGCATG
TACAGCATGCCGTATTGGATGGGCGCGCAACCCGGTATGCCGCAGCAGCC
CAGGCAATACATGGTGCCGCACATGATGCCTAGGGGGCCTCGTGGGCCCA
TGCCTGAGATGCCGGACGGTGAAGGCACCACGACGCTGTATTGCGCGCGC
GCCCAGAAGAAGAGTGAGCGCCAGCGCGAGCTGCAGTCGAAGCACGAGCA
AGTGAAGATGGAGCGCATGAACAAGTTCCAGGGCGTTAACGTATACGTGA
AGAACCTGGACGAGGGCGTGACGGATGACACCATGCGCGAGGCGTTTTCC
CCTTACGGTACTATCACCAGCGCTCGCGTCATGGTGGACAACACCTCCGG
CCAGAGCAAGGGTTTCGGGTTTGTGTGCTTTTCTGCCCCCGAAGAGGCGA
CGAAGGCCATAACGGAGATGAACGGGAAGATGCTTCTGAACAAGCCCATC
TATGTTGCCCTAGCCCAGCGCCGGGAGGTGCGCCGCACCCAGCTGGAGGC
TCAGTTCGCCCAACGCACAGGCATGCCTCCTCGCGGCCTGCCCATGGCCG
GCCAGGGCATGTACAGCATGCCGTATTGGATGGGCGCGCAACCCGGTATG
CCGCAGCAGCCCAGGCAATACATGGTGCCGCACATGATGCCTAGGGGGCC
TCGTGGGCCCATGCCT
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