mRNA_F-distichus_contig101971.160.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig101971.160.1 vs. uniprot
Match: D7FRE2_ECTSI (Checkpoint protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE2_ECTSI) HSP 1 Score: 228 bits (581), Expect = 4.400e-73 Identity = 113/132 (85.61%), Postives = 123/132 (93.18%), Query Frame = 1
Query: 1 AGLIGAIEKIGEACIVHLTESTLHLSIHESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANEASYYRPPEVQMPQ 396
AG+IGAIEKIG AC+VHLTE+ +HLS+ ESGSEGVDVYAEL QDMLFHEYRIESRAGN ILFEANASLLLQALNSG+T+PTCQIKLAKRAGQPCLS+ETRALEI+VVHDIPVKVMPANEA YY PP+V PQ
Sbjct: 16 AGVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQDMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPKVHSPQ 147
BLAST of mRNA_F-distichus_contig101971.160.1 vs. uniprot
Match: A0A7S3YAY1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAY1_HETAK) HSP 1 Score: 136 bits (343), Expect = 7.750e-38 Identity = 65/132 (49.24%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 1 AGLIGAIEKIGEACIVHLTESTLHLSIHESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANEASYYRPPEVQMPQ 396
+GLI +EK+ + C+++LTES++ +SI ES + + V++E+ Q+ LF +YRIES + N IL E + L +AL SGR AP CQ+KLAKR G+PCL+VETRALE+D+ HD+PVK++ + ++ PEV PQ
Sbjct: 17 SGLISILEKVSQVCVIYLTESSMRISIKES-QDDIQVFSEISQERLFTDYRIESLSNNCILLEVGTANLGRALASGRRAPACQLKLAKRGGRPCLAVETRALEVDIAHDLPVKLLRPGDVRFHLAPEVPRPQ 147
BLAST of mRNA_F-distichus_contig101971.160.1 vs. uniprot
Match: A0A7S2SUZ2_9STRA (Checkpoint protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUZ2_9STRA) HSP 1 Score: 130 bits (328), Expect = 2.370e-34 Identity = 67/133 (50.38%), Postives = 91/133 (68.42%), Query Frame = 1
Query: 4 GLIGAIEKIGEACIVHLTESTLHLSIHESGSEGVDV--YAELQQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANEASYYRPPEVQMPQ 396
G+ +EKIG +VHL+++++ L I +G DV ++ L+Q LFH++RIES++GN IL + LL AL+S R AP CQ+KL KR GQ L +ETRALE+DV+HDIPV VM A+E YY PP+V PQ
Sbjct: 60 GVAATLEKIGPLGVVHLSDTSIQLCIRNDSGQGDDVLAFSALEQKELFHDWRIESQSGNCILLQLTLQNLLDALHSARNAPQCQLKLTKRNGQAALCLETRALEVDVIHDIPVTVMRASEYQYYCPPDVPQPQ 192
BLAST of mRNA_F-distichus_contig101971.160.1 vs. uniprot
Match: W7TDG5_9STRA (Checkpoint protein hus1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDG5_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.210e-32 Identity = 56/130 (43.08%), Postives = 92/130 (70.77%), Query Frame = 1
Query: 4 GLIGAIEKIGEACIVHLTESTLHLSIHESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANEASYYRPPEVQMP 393
G+ E+ G +C+++L+E ++ + + GS+ V ++E+QQ+ +F EYRI S A N ILFE S L++A +S +TA ++KLAKRAGQPC+ +E RAL+++++H++P++VM A + YY PP+V MP
Sbjct: 17 GVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMP 146
BLAST of mRNA_F-distichus_contig101971.160.1 vs. uniprot
Match: A0A4D9CSQ4_9STRA (Checkpoint protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSQ4_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.370e-32 Identity = 57/130 (43.85%), Postives = 92/130 (70.77%), Query Frame = 1
Query: 4 GLIGAIEKIGEACIVHLTESTLHLSIHESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANEASYYRPPEVQMP 393
G+ E+ G +C+++L+E ++ + + GS+ V ++E+QQ+ +F EYRI S A N ILFE S L++A +S +TA +IKLAKRAGQPC+ +E RAL+++++H++P++VM A + YY PP+V MP
Sbjct: 17 GVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRIKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMP 146
BLAST of mRNA_F-distichus_contig101971.160.1 vs. uniprot
Match: A0A7S1TZY9_9STRA (Checkpoint protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY9_9STRA) HSP 1 Score: 117 bits (294), Expect = 9.310e-30 Identity = 65/134 (48.51%), Postives = 84/134 (62.69%), Query Frame = 1
Query: 4 GLIGAIEKIGEAC----IVHLTESTLHLSIHESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANEASYYRPPEVQMP 393
G+I +EK ++HL+ L++ + +E V+AEL D LF EYRIES++ + IL EA + L +A SGR AP C +KL KR GQPCL +ETRALE+DV HDIPVKV+ A E Y PPEV P
Sbjct: 17 GVIMCLEKATAGATPTVLLHLSPGGAKLALPTASTEEPQVFAELAADKLFAEYRIESQSDDCILLEAGLANLARAFRSGRAAPLCLLKLTKRRGQPCLCLETRALEVDVTHDIPVKVLKAAEIEAYAPPEVPAP 150
BLAST of mRNA_F-distichus_contig101971.160.1 vs. uniprot
Match: A0A7R9U1B3_9STRA (Checkpoint protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1B3_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 2.580e-18 Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 1
Query: 223 SGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANEASYYRPPEVQMP 393
SGRTAP CQ+KL KR GQPCL +ETRALE+DV HDIPVKV+ A+E Y PPEV P
Sbjct: 2 SGRTAPLCQLKLTKRGGQPCLCLETRALEVDVTHDIPVKVLKASEIEAYAPPEVPSP 58
BLAST of mRNA_F-distichus_contig101971.160.1 vs. uniprot
Match: M4BAP0_HYAAE (Checkpoint protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAP0_HYAAE) HSP 1 Score: 81.3 bits (199), Expect = 7.840e-16 Identity = 43/119 (36.13%), Postives = 68/119 (57.14%), Query Frame = 1
Query: 40 CIVHLTESTLHLSIHESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANEASYYRPPEVQMPQ 396
C+ +LT TL +++ G+E + ++ L LFH+ ++S+A N I F + L QAL+SG+ A ++L KR G L + RA++ID+V IP+KV+ + YR P V PQ
Sbjct: 35 CVFNLTPQTLSIALKSGGAEELQSFSRLPITRLFHDVVVQSQAENHIGFLCDVRHLQQALSSGKDASAVMLRLLKRDGSNFLCLRMRAVDIDIVQSIPIKVVAMSTLEQYREPSVPAPQ 153
BLAST of mRNA_F-distichus_contig101971.160.1 vs. uniprot
Match: G7E5C8_MIXOS (Checkpoint protein n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7E5C8_MIXOS) HSP 1 Score: 71.2 bits (173), Expect = 5.470e-12 Identity = 38/118 (32.20%), Postives = 65/118 (55.08%), Query Frame = 1
Query: 7 LIGAIEKIGEACIVHLTESTLHLSIHESGSEGVDVYAELQQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALE-----IDVVHDIPVKVM 345
++ ++ + + CI+ LT +H+ S V+A++ +++F EYRIES AGN I E L +ALNSG+ A I+L K+ P LS+ ++ ID++ +I V+V+
Sbjct: 16 IVSSVSTLAKQCIIKLTAEKVHIICMGDISSSTQVWAQIDVNVIFAEYRIESSAGNMIYLEVVTEALKRALNSGQGATEAVIRLTKKGATPILSLAIKSASHTGKAIDILQEISVRVL 133
BLAST of mRNA_F-distichus_contig101971.160.1 vs. uniprot
Match: A0A2C9L6C6_BIOGL (Checkpoint protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9L6C6_BIOGL) HSP 1 Score: 69.7 bits (169), Expect = 6.970e-12 Identity = 45/134 (33.58%), Postives = 69/134 (51.49%), Query Frame = 1
Query: 7 LIGAIEKIGEACIVHLTESTLHLSIHES-GSEGVDVYAELQQDMLFHEYRIE--SRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRAL-----EIDVVHDIPVKVMPANEASYYRPPEV 384
++G I K+ + CI+ +TE + + E G G ++ EL Q F EY ++ S NEI E L+L+AL + +A ++KL K+ PCL++E + VVHDIPV V+P Y PE+
Sbjct: 19 IVGTISKLVKTCIMRITEDKVFFILSERIGDGGAQMWCELDQSHFFDEYAMDGVSAEANEIYLEVMPDLMLKALKTAHSAKWIKLKLTKK-NTPCLTMEIDLPTGGPHQRQVVHDIPVNVVPRKHWPDYTEPEM 151 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101971.160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig101971.160.1 >prot_F-distichus_contig101971.160.1 ID=prot_F-distichus_contig101971.160.1|Name=mRNA_F-distichus_contig101971.160.1|organism=Fucus distichus monoicous|type=polypeptide|length=132bp AGLIGAIEKIGEACIVHLTESTLHLSIHESGSEGVDVYAELQQDMLFHEYback to top mRNA from alignment at F-distichus_contig101971:735..1933+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig101971.160.1 ID=mRNA_F-distichus_contig101971.160.1|Name=mRNA_F-distichus_contig101971.160.1|organism=Fucus distichus monoicous|type=mRNA|length=1199bp|location=Sequence derived from alignment at F-distichus_contig101971:735..1933+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig101971:735..1933+ >mRNA_F-distichus_contig101971.160.1 ID=mRNA_F-distichus_contig101971.160.1|Name=mRNA_F-distichus_contig101971.160.1|organism=Fucus distichus monoicous|type=CDS|length=792bp|location=Sequence derived from alignment at F-distichus_contig101971:735..1933+ (Fucus distichus monoicous)back to top |