mRNA_F-distichus_contig101782.148.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig101782.148.1
Unique NamemRNA_F-distichus_contig101782.148.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig101782.148.1 vs. uniprot
Match: D1GJT1_FUCVE (50S ribosomal protein L4, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJT1_FUCVE)

HSP 1 Score: 392 bits (1008), Expect = 7.310e-136
Identity = 211/215 (98.14%), Postives = 213/215 (99.07%), Query Frame = 1
Query:    1 MISEKTLTFPIKLLTGNESKDKITLTLKVKDGNETNNYVIHRAYLTQRLNERQGTASTLTRAEVRGGGRKPWRQKGMGRARAGSNRSPLWKGGGVSFGPKPKLYSNKINRKEWKLGLRSLLISKQNNIIIIDNLNITEYKTKNIIKILKIFNINLSEKTLFILPKIEENLLRSTNNIKTIKLTIASNLNLKQILLAKNLLVTKDSLKIIEDTYNG 645
            MISEKTLTFPIKLLTGNESKDKITLTLKVKD NETNNYVIHRAYLTQRLNERQGTASTLTRAEVRGGGRKP RQKGMGRARAGSNRSPLWKGGGVSFGPKPKLYSNKINRKEWKLGLRSLLISKQNNIII+DNLNITEYKTKNIIKILKIFNINLSEKTLFILPKIE+NLLRSTNNIKTIKLTIASNLNLKQILLAKNLLVTKDSLKIIEDTYNG
Sbjct:    1 MISEKTLTFPIKLLTGNESKDKITLTLKVKDANETNNYVIHRAYLTQRLNERQGTASTLTRAEVRGGGRKPLRQKGMGRARAGSNRSPLWKGGGVSFGPKPKLYSNKINRKEWKLGLRSLLISKQNNIIIVDNLNITEYKTKNIIKILKIFNINLSEKTLFILPKIEKNLLRSTNNIKTIKLTIASNLNLKQILLAKNLLVTKDSLKIIEDTYNG 215          
BLAST of mRNA_F-distichus_contig101782.148.1 vs. uniprot
Match: A0A141BSP0_9PHAE (50S ribosomal protein L4, chloroplastic n=13 Tax=Sargassum TaxID=3015 RepID=A0A141BSP0_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 3.760e-107
Identity = 172/215 (80.00%), Postives = 195/215 (90.70%), Query Frame = 1
Query:    1 MISEKTLTFPIKLLTGNESKDKITLTLKVKDGNETNNYVIHRAYLTQRLNERQGTASTLTRAEVRGGGRKPWRQKGMGRARAGSNRSPLWKGGGVSFGPKPKLYSNKINRKEWKLGLRSLLISKQNNIIIIDNLNITEYKTKNIIKILKIFNINLSEKTLFILPKIEENLLRSTNNIKTIKLTIASNLNLKQILLAKNLLVTKDSLKIIEDTYNG 645
            M+S+K LTF IK L G+   DK TL+LKVK+ N+TNNYVI RAYLTQRLNERQGTA+TLTRAEVRGGGRKPWRQKGMGRARAGSN SPLWKGGGVSFGPKPKLY NKINRKEWKLGLR+LL++K+ NI +I+N++ITEYKTKNIIKIL+ F+INL++ TL ILP IE+ LLRST+NIKTIKLT+A+NLNLKQILLAKNLLV KDSLKIIEDTYNG
Sbjct:    1 MVSKKILTFTIKSLKGDT--DKTTLSLKVKELNDTNNYVIQRAYLTQRLNERQGTANTLTRAEVRGGGRKPWRQKGMGRARAGSNTSPLWKGGGVSFGPKPKLYLNKINRKEWKLGLRNLLVAKEKNITVIENISITEYKTKNIIKILEDFSINLAKDTLIILPTIEKELLRSTSNIKTIKLTLANNLNLKQILLAKNLLVIKDSLKIIEDTYNG 213          
BLAST of mRNA_F-distichus_contig101782.148.1 vs. uniprot
Match: A0A0R6LUU1_UNDPI (50S ribosomal protein L4, chloroplastic n=28 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUU1_UNDPI)

HSP 1 Score: 312 bits (800), Expect = 3.100e-104
Identity = 163/215 (75.81%), Postives = 185/215 (86.05%), Query Frame = 1
Query:    1 MISEKTLTFPIKLLTGNESKDKITLTLKVKDGNETNNYVIHRAYLTQRLNERQGTASTLTRAEVRGGGRKPWRQKGMGRARAGSNRSPLWKGGGVSFGPKPKLYSNKINRKEWKLGLRSLLISKQNNIIIIDNLNITEYKTKNIIKILKIFNINLSEKTLFILPKIEENLLRSTNNIKTIKLTIASNLNLKQILLAKNLLVTKDSLKIIEDTYNG 645
            M  +K LTFP+K+LTG ES D+ITLTLK+K+   T NYVI RAYL QR NERQGTA+TLTRAEV+GGGRKPWRQKG GRARAGSNRSPLWKGGGVSFGPKPK YS+KINRKEW+L LRSLLI+KQ +I I+DN N  EYKT NIIK+L  FNINL E TL ++PKI+E LL+ST NIKTIKL +A+NLNLKQILLAKNLL+TKDSLK IE+TYNG
Sbjct:    1 MALQKILTFPVKILTGEESGDEITLTLKLKEATNTINYVIQRAYLAQRSNERQGTANTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPKFYSSKINRKEWQLSLRSLLIAKQKDITIVDNFNFLEYKTSNIIKVLNTFNINLFENTLIVVPKIDEKLLKSTRNIKTIKLIVANNLNLKQILLAKNLLITKDSLKTIEETYNG 215          
BLAST of mRNA_F-distichus_contig101782.148.1 vs. uniprot
Match: A0A8F0F722_AKKLU (Ribosomal protein L4 n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F722_AKKLU)

HSP 1 Score: 311 bits (798), Expect = 6.240e-104
Identity = 167/215 (77.67%), Postives = 187/215 (86.98%), Query Frame = 1
Query:    1 MISEKTLTFPIKLLTGNESKDKITLTLKVKDGNETNNYVIHRAYLTQRLNERQGTASTLTRAEVRGGGRKPWRQKGMGRARAGSNRSPLWKGGGVSFGPKPKLYSNKINRKEWKLGLRSLLISKQNNIIIIDNLNITEYKTKNIIKILKIFNINLSEKTLFILPKIEENLLRSTNNIKTIKLTIASNLNLKQILLAKNLLVTKDSLKIIEDTYNG 645
            MI +K LTFPIKLLTG ES DKITLTLK K+  + +NYVI RAYLTQR NERQGTA+TLTRAEV+GGGRKPWRQKG GRARAGSN SPLWKGGGVSFGPKPKLYSNKINRKEW+L LRSLLI+KQ +I +IDN+N  EYKT NIIK L  F+INL + TL I+PKIE+ LL+ST NIKTIK+ +A+NLNLKQILLAKNLLVTKDSLK IE+TYNG
Sbjct:    1 MILQKILTFPIKLLTGKESGDKITLTLKSKEITDKSNYVIQRAYLTQRYNERQGTANTLTRAEVKGGGRKPWRQKGTGRARAGSNTSPLWKGGGVSFGPKPKLYSNKINRKEWQLSLRSLLIAKQKDITVIDNINPLEYKTDNIIKTLNSFDINLFDNTLLIVPKIEDKLLKSTRNIKTIKVIVANNLNLKQILLAKNLLVTKDSLKTIEETYNG 215          
BLAST of mRNA_F-distichus_contig101782.148.1 vs. uniprot
Match: A0A8F0FA21_9PHAE (Ribosomal protein L4 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FA21_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 1.020e-102
Identity = 160/215 (74.42%), Postives = 188/215 (87.44%), Query Frame = 1
Query:    1 MISEKTLTFPIKLLTGNESKDKITLTLKVKDGNETNNYVIHRAYLTQRLNERQGTASTLTRAEVRGGGRKPWRQKGMGRARAGSNRSPLWKGGGVSFGPKPKLYSNKINRKEWKLGLRSLLISKQNNIIIIDNLNITEYKTKNIIKILKIFNINLSEKTLFILPKIEENLLRSTNNIKTIKLTIASNLNLKQILLAKNLLVTKDSLKIIEDTYNG 645
            MI +K +TFPIK +TG ES DKITL LK+KD   TNNYVI RAYLTQRLNERQGTA+TLTRAEV+GGGRKPW+QKG GRARAGSN SPLWKGGGVSFGPKPKLYSNKINRKEW+L LRSLL++K+ +I +++N N+ +YKT +IIKIL+ FNINL E TL I+PKIEE L++ST NIKTIK+ +A+NLNLKQILLA+NL +TKDSLK IE+TYNG
Sbjct:    1 MILQKLITFPIKSITGKESGDKITLNLKLKDVVTTNNYVIQRAYLTQRLNERQGTANTLTRAEVKGGGRKPWKQKGTGRARAGSNTSPLWKGGGVSFGPKPKLYSNKINRKEWQLSLRSLLVAKEKDITVLENFNLLDYKTNDIIKILQSFNINLFENTLIIVPKIEEKLIKSTKNIKTIKVLVANNLNLKQILLAQNLFITKDSLKTIEETYNG 215          
BLAST of mRNA_F-distichus_contig101782.148.1 vs. uniprot
Match: A0A8F0FAT9_9PHAE (Ribosomal protein L4 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAT9_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 1.680e-101
Identity = 161/215 (74.88%), Postives = 185/215 (86.05%), Query Frame = 1
Query:    1 MISEKTLTFPIKLLTGNESKDKITLTLKVKDGNETNNYVIHRAYLTQRLNERQGTASTLTRAEVRGGGRKPWRQKGMGRARAGSNRSPLWKGGGVSFGPKPKLYSNKINRKEWKLGLRSLLISKQNNIIIIDNLNITEYKTKNIIKILKIFNINLSEKTLFILPKIEENLLRSTNNIKTIKLTIASNLNLKQILLAKNLLVTKDSLKIIEDTYNG 645
            M  EK LTFPIKLLTG ES D ITLTLK K+ + T+NY+IHRAYLTQ  NERQG A+TLTR+EVRGGGRKPW+QKG GRARAGS  SPLWKGGGVSFGPKPKLYSNKINRKEW+LGLR+LLI+KQ +I II+N + T YKT +IIK LK+FNI + EKTL I+PKI+E LL+ST NIKTIKL +A+NLN+KQILLAKNL +TKDSLK IE+TYNG
Sbjct:    1 MSLEKILTFPIKLLTGEESGDNITLTLKSKELSNTSNYIIHRAYLTQLYNERQGNANTLTRSEVRGGGRKPWKQKGTGRARAGSKSSPLWKGGGVSFGPKPKLYSNKINRKEWQLGLRNLLIAKQKDITIINNFSSTNYKTNDIIKALKVFNIKIFEKTLIIVPKIDEKLLKSTRNIKTIKLIVANNLNIKQILLAKNLFITKDSLKTIEETYNG 215          
BLAST of mRNA_F-distichus_contig101782.148.1 vs. uniprot
Match: A0A1L2F1P9_9PHAE (Ribosomal protein L4 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1P9_9PHAE)

HSP 1 Score: 289 bits (739), Expect = 5.270e-95
Identity = 158/215 (73.49%), Postives = 180/215 (83.72%), Query Frame = 1
Query:    1 MISEKTLTFPIKLLTGNESKDKITLTLKVKDGNETNNYVIHRAYLTQRLNERQGTASTLTRAEVRGGGRKPWRQKGMGRARAGSNRSPLWKGGGVSFGPKPKLYSNKINRKEWKLGLRSLLISKQNNIIIIDNLNITEYKTKNIIKILKIFNINLSEKTLFILPKIEENLLRSTNNIKTIKLTIASNLNLKQILLAKNLLVTKDSLKIIEDTYNG 645
            MISEK LTF IK L G+   DKITL+LKVKD N TNNYVI RAYLTQR+NERQGTA+TLTRAEVRGGG K WRQKGMGRARAGSN SPLWKGGGVSFGPKPKLY NKINRKEWKLGLR+LLI+K+NNI +++N+ ITEYKTKNIIK+L+ F+I+L+E TL ILP I++ LL+STNNIKTIKLT+A+             L+ KDSLKIIEDTYNG
Sbjct:    1 MISEKILTFTIKSLKGDT--DKITLSLKVKDLNNTNNYVIQRAYLTQRINERQGTANTLTRAEVRGGGSKTWRQKGMGRARAGSNNSPLWKGGGVSFGPKPKLYLNKINRKEWKLGLRNLLIAKENNITVVENIRITEYKTKNIIKMLEGFSIDLAEDTLIILPMIQKELLQSTNNIKTIKLTLANXXXXXXXXXXXXXLIMKDSLKIIEDTYNG 213          
BLAST of mRNA_F-distichus_contig101782.148.1 vs. uniprot
Match: A0A8F0JXJ6_9PHAE (Ribosomal protein L4 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JXJ6_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 3.470e-92
Identity = 148/218 (67.89%), Postives = 182/218 (83.49%), Query Frame = 1
Query:    1 MISEKTLTFPIKLLTGNESKDKITLTLKVKDGNETNNYVIHRAYLTQRLNERQGTASTLTRAEVRGGGRKPWRQKGMGRARAGSNRSPLWKGGGVSFGPKPKLYSNKINRKEWKLGLRSLLISKQNNIIIIDNLNITEYKTKNIIKILKIFNINLSEKTLFILPKIEENLLRSTNNIKTIKLTIASNLNLKQILLAKNLLVTKDSLKIIEDTYNG*NK 654
            M+SEK LTFPIK LTG ES  KI + LK+ + N T+NY+I RAYLTQR NERQGTA+TLTRAEVRGGGRKPWRQKG G+ARAGSN SPLW+ GGVSFGPKPK YSNKINRKEW+LGLR+LLI KQNNI+++++ N   ++TK I + L+ F+I L E TLFI+ K+E++LL++T NIK IK+ +A+NLN+KQIL AKNL +T+ SLKIIE+TYNG NK
Sbjct:    1 MVSEKILTFPIKDLTGAESGKKIKVILKLTEQNNTSNYIIQRAYLTQRYNERQGTANTLTRAEVRGGGRKPWRQKGTGKARAGSNTSPLWRNGGVSFGPKPKEYSNKINRKEWQLGLRNLLIKKQNNIVVLNDFNFVNFRTKTIKQSLETFDIKLFENTLFIVSKLEKDLLKATCNIKNIKVLLANNLNIKQILFAKNLFITETSLKIIEETYNGPNK 218          
BLAST of mRNA_F-distichus_contig101782.148.1 vs. uniprot
Match: A0A8E6D2Q2_9PHAE (50S ribosomal protein L4, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D2Q2_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 3.050e-85
Identity = 143/216 (66.20%), Postives = 174/216 (80.56%), Query Frame = 1
Query:    1 MISEKTLTFPIKLLTGNESKDKITLTLKVKDGNE-TNNYVIHRAYLTQRLNERQGTASTLTRAEVRGGGRKPWRQKGMGRARAGSNRSPLWKGGGVSFGPKPKLYSNKINRKEWKLGLRSLLISKQNNIIIIDNLNITEYKTKNIIKILKIFNINLSEKTLFILPKIEENLLRSTNNIKTIKLTIASNLNLKQILLAKNLLVTKDSLKIIEDTYNG 645
            M SEKTL F +K L+G ESKD   +TLK K  NE T+NY+IHRA+LTQR NERQGTA+TLTR+EVRGGGRKPWRQKG GRARAGSN SPLWKGGGVSFGPKPK++SNKINRKE KL LRSLL +K+ NII+ +NLN T  KT  + K L    I+L E  L ++PKIE NL +S  NI+TI++T+A+NLN++QIL+AK + + K+SL+IIEDTYNG
Sbjct:    1 MSSEKTLIFSVKDLSGEESKDTTAITLKSKKKNEATDNYLIHRAFLTQRHNERQGTANTLTRSEVRGGGRKPWRQKGTGRARAGSNTSPLWKGGGVSFGPKPKIFSNKINRKERKLALRSLLFAKRENIIVANNLNYTTCKTSLLKKNLDTLGIDLRENVLIVVPKIERNLFKSAQNIRTIRVTMANNLNIRQILIAKYIFIAKESLQIIEDTYNG 216          
BLAST of mRNA_F-distichus_contig101782.148.1 vs. uniprot
Match: A0A7T8G5K9_SCYLO (50S ribosomal protein L4, chloroplastic n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8G5K9_SCYLO)

HSP 1 Score: 259 bits (661), Expect = 1.470e-82
Identity = 137/213 (64.32%), Postives = 171/213 (80.28%), Query Frame = 1
Query:   10 EKTLTFPIKLLTGNESKDKITLTLKVKDGNETNNYVIHRAYLTQRLNERQGTASTLTRAEVRGGGRKPWRQKGMGRARAGSNRSPLWKGGGVSFGPKPKLYSNKINRKEWKLGLRSLLISKQNNIIIIDN-LNITEYKTKNIIKILKIFNINLSEKTLFILPKIEENLLRSTNNIKTIKLTIASNLNLKQILLAKNLLVTKDSLKIIEDTYNG 645
            +K LTFPIK L G ++K+  TLTL+VK+  ET NY+I+RAY+ QR+NERQGT STLTRAEV+GGGRKPWRQKG GRARAGSNRSPLWKGGGVSFGPKPKLY+NK+NRKEW+L +RSL++ K+  I +ID+  N  + KTK  I + K  NIN S+   FI+P+IEE+L ++T NIKT+KL  A  LNL  IL + +LL++KDSLKIIE+TYNG
Sbjct:   44 DKVLTFPIKPLVGGDNKETATLTLQVKEKQETENYIIYRAYIAQRINERQGTVSTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWKGGGVSFGPKPKLYTNKLNRKEWQLAVRSLIMLKEPIINVIDHDFNSMDIKTKAFINLFKTCNINFSQNITFIVPRIEESLFKATRNIKTVKLMRADTLNLITILRSDHLLISKDSLKIIEETYNG 256          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101782.148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1GJT1_FUCVE7.310e-13698.1450S ribosomal protein L4, chloroplastic n=3 Tax=Fu... [more]
A0A141BSP0_9PHAE3.760e-10780.0050S ribosomal protein L4, chloroplastic n=13 Tax=S... [more]
A0A0R6LUU1_UNDPI3.100e-10475.8150S ribosomal protein L4, chloroplastic n=28 Tax=L... [more]
A0A8F0F722_AKKLU6.240e-10477.67Ribosomal protein L4 n=1 Tax=Akkesiphycus lubricus... [more]
A0A8F0FA21_9PHAE1.020e-10274.42Ribosomal protein L4 n=1 Tax=Chorda asiatica TaxID... [more]
A0A8F0FAT9_9PHAE1.680e-10174.88Ribosomal protein L4 n=1 Tax=Desmarestia aculeata ... [more]
A0A1L2F1P9_9PHAE5.270e-9573.49Ribosomal protein L4 n=1 Tax=Coccophora langsdorfi... [more]
A0A8F0JXJ6_9PHAE3.470e-9267.89Ribosomal protein L4 n=1 Tax=Protohalopteris sp. T... [more]
A0A8E6D2Q2_9PHAE3.050e-8566.2050S ribosomal protein L4, chloroplastic n=1 Tax=Is... [more]
A0A7T8G5K9_SCYLO1.470e-8264.3250S ribosomal protein L4, chloroplastic n=5 Tax=Sc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101782contigF-distichus_contig101782:477..1419 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.1
Seed ortholog evalue3.9e-63
Seed eggNOG ortholog2880.D1J751
Preferred namerpl4
KEGG koko:K02926
KEGG Pathwayko03010,map03010
KEGG ModuleM00178
Hectar predicted targeting categoryother localisation
GOsGO:0000311,GO:0000313,GO:0000315,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0009058,GO:0009059,GO:0009507,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009547,GO:0009570,GO:0009579,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022626,GO:0031976,GO:0031984,GO:0032991,GO:0034357,GO:0034641,GO:0034645,GO:0042651,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0055035,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG0088@1,KOG1624@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons1
Model size943
Cds size648
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928932.981289-UTR-F-distichus_contig101782:476..7711622928932.981289-UTR-F-distichus_contig101782:476..771Fucus distichus monoicousUTRF-distichus_contig101782 477..771 -
1690885072.493858-UTR-F-distichus_contig101782:476..7711690885072.493858-UTR-F-distichus_contig101782:476..771Fucus distichus monoicousUTRF-distichus_contig101782 477..771 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928932.9948313-CDS-F-distichus_contig101782:771..14191622928932.9948313-CDS-F-distichus_contig101782:771..1419Fucus distichus monoicousCDSF-distichus_contig101782 772..1419 -
1690885072.5093253-CDS-F-distichus_contig101782:771..14191690885072.5093253-CDS-F-distichus_contig101782:771..1419Fucus distichus monoicousCDSF-distichus_contig101782 772..1419 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101782.148.1prot_F-distichus_contig101782.148.1Fucus distichus monoicouspolypeptideF-distichus_contig101782 772..1419 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig101782.148.1

>prot_F-distichus_contig101782.148.1 ID=prot_F-distichus_contig101782.148.1|Name=mRNA_F-distichus_contig101782.148.1|organism=Fucus distichus monoicous|type=polypeptide|length=216bp
MISEKTLTFPIKLLTGNESKDKITLTLKVKDGNETNNYVIHRAYLTQRLN
ERQGTASTLTRAEVRGGGRKPWRQKGMGRARAGSNRSPLWKGGGVSFGPK
PKLYSNKINRKEWKLGLRSLLISKQNNIIIIDNLNITEYKTKNIIKILKI
FNINLSEKTLFILPKIEENLLRSTNNIKTIKLTIASNLNLKQILLAKNLL
VTKDSLKIIEDTYNG*
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mRNA from alignment at F-distichus_contig101782:477..1419-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig101782.148.1 ID=mRNA_F-distichus_contig101782.148.1|Name=mRNA_F-distichus_contig101782.148.1|organism=Fucus distichus monoicous|type=mRNA|length=943bp|location=Sequence derived from alignment at F-distichus_contig101782:477..1419- (Fucus distichus monoicous)
ATGATCTCAGAAAAAACTCTTACATTTCCTATTAAACTTTTAACAGGAAA TGAAAGCAAAGATAAAATAACATTAACTTTAAAAGTAAAAGACGGGAATG AGACAAATAATTATGTTATTCATCGTGCCTATTTAACGCAAAGATTAAAT GAAAGACAAGGTACTGCAAGTACTTTAACTAGAGCTGAAGTTCGAGGTGG GGGGAGAAAGCCTTGGCGACAAAAAGGAATGGGACGAGCTCGTGCAGGTT CGAATCGATCACCTTTGTGGAAAGGGGGAGGAGTTTCTTTTGGACCTAAA CCTAAATTATATTCAAATAAGATAAATCGTAAAGAATGGAAATTAGGTTT GCGAAGTTTATTAATTTCAAAACAAAATAATATAATTATAATAGATAATC TTAATATTACAGAATATAAGACTAAAAATATTATTAAAATATTAAAGATT TTTAATATAAACTTATCTGAAAAGACATTATTTATCCTTCCAAAGATTGA AGAAAATTTACTACGATCAACTAATAATATAAAAACAATTAAATTAACAA TTGCTAGTAATTTAAATTTAAAACAAATTCTATTAGCTAAAAATTTATTA GTCACTAAAGATAGTTTAAAAATAATTGAGGATACTTATAATGGTTAAAA TAAAATTGAGTTCAATTATTGATTTAATTAAATACCCAGTAACAACTCCC AAAACTCTTTTATTACTAGAAAATAATCAATATACATTTTTGGTAGACCC TAAACTTAATAAACTTAATATAAAAAAAGCAATAGAATTTTTATTTAATG TAAAAGTTATCAAGGTTAATAGTTGTAATCTACCGAAAAAAAAACGTCGT GTAGGACGATTTATTGGTATTCGACCTCGATATAAAAAGGTGATAGTTAA ATTAGCAAAAGATGATAAAATTAACCTCTTTTCTAAGAATTCA
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Coding sequence (CDS) from alignment at F-distichus_contig101782:477..1419-

>mRNA_F-distichus_contig101782.148.1 ID=mRNA_F-distichus_contig101782.148.1|Name=mRNA_F-distichus_contig101782.148.1|organism=Fucus distichus monoicous|type=CDS|length=1296bp|location=Sequence derived from alignment at F-distichus_contig101782:477..1419- (Fucus distichus monoicous)
ATGATCTCAGAAAAAACTCTTACATTTCCTATTAAACTTTTAACAGGAAA
TGAAAGCAAAGATAAAATAACATTAACTTTAAAAGTAAAAGACGGGAATG
AGACAAATAATTATGTTATTCATCGTGCCTATTTAACGCAAAGATTAAAT
GAAAGACAAGGTACTGCAAGTACTTTAACTAGAGCTGAAGTTCGAGGTGG
GGGGAGAAAGCCTTGGCGACAAAAAGGAATGGGACGAGCTCGTGCAGGTT
CGAATCGATCACCTTTGTGGAAAGGGGGAGGAGTTTCTTTTGGACCTAAA
CCTAAATTATATTCAAATAAGATAAATCGTAAAGAATGGAAATTAGGTTT
GCGAAGTTTATTAATTTCAAAACAAAATAATATAATTATAATAGATAATC
TTAATATTACAGAATATAAGACTAAAAATATTATTAAAATATTAAAGATT
TTTAATATAAACTTATCTGAAAAGACATTATTTATCCTTCCAAAGATTGA
AGAAAATTTACTACGATCAACTAATAATATAAAAACAATTAAATTAACAA
TTGCTAGTAATTTAAATTTAAAACAAATTCTATTAGCTAAAAATTTATTA
GTCACTAAAGATAGTTTAAAAATAATTGAGGATACTTATAATGGTTAAAT
GATCTCAGAAAAAACTCTTACATTTCCTATTAAACTTTTAACAGGAAATG
AAAGCAAAGATAAAATAACATTAACTTTAAAAGTAAAAGACGGGAATGAG
ACAAATAATTATGTTATTCATCGTGCCTATTTAACGCAAAGATTAAATGA
AAGACAAGGTACTGCAAGTACTTTAACTAGAGCTGAAGTTCGAGGTGGGG
GGAGAAAGCCTTGGCGACAAAAAGGAATGGGACGAGCTCGTGCAGGTTCG
AATCGATCACCTTTGTGGAAAGGGGGAGGAGTTTCTTTTGGACCTAAACC
TAAATTATATTCAAATAAGATAAATCGTAAAGAATGGAAATTAGGTTTGC
GAAGTTTATTAATTTCAAAACAAAATAATATAATTATAATAGATAATCTT
AATATTACAGAATATAAGACTAAAAATATTATTAAAATATTAAAGATTTT
TAATATAAACTTATCTGAAAAGACATTATTTATCCTTCCAAAGATTGAAG
AAAATTTACTACGATCAACTAATAATATAAAAACAATTAAATTAACAATT
GCTAGTAATTTAAATTTAAAACAAATTCTATTAGCTAAAAATTTATTAGT
CACTAAAGATAGTTTAAAAATAATTGAGGATACTTATAATGGTTAA
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