mRNA_F-distichus_contig10148.118.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10148.118.1 vs. uniprot
Match: A0A6H5KPQ7_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPQ7_9PHAE) HSP 1 Score: 335 bits (860), Expect = 2.130e-98 Identity = 233/495 (47.07%), Postives = 271/495 (54.75%), Query Frame = 2
Query: 218 QQLIEQQAAEEMRKSAKRAANRKSASTCRAKKKFLVDNMAEANNRMRKRLRVLSLLPDMILAMRRDGVVTYASKNCRQFLKFTREEVQGANIFDIVESGSHERLRRLLEENLGSVSKETIASALRHQGTTFQDLLARCEKANEQGDTRFFAASGEALRVLPGPVPSKRAKIAAATTGATNGVSKGDRGRTSASISDNGGGIRKMTSGSGSAGTAEVDGSTDDWESEVNSMSAYE-------------------------------------VGG------------------GGIARKADVTSLGRVKKSFRPFG------------TAGRGAEMKSRNGSDHGVGPASISGRTLATLSAAAALVSPAECKKAKGGDTTRS--STGGSDSSGDGSVTG----------SQGAVSVDRDLQSKINAFTNSHKELCKLEVVRQDKKSDWYEVRSSMRLVWLKNKQEIAPVEVICSFQPIHMDGPAGSANSIVARLQR 1465
QQL+ QQA EEMRKSAKRAANR+SA+TCR +KKF V+NMA+AN RMRKR RVLSLLPDMILAMRRDGV+TYAS+NCRQFL+FTR+EV+G NIFD+VESGSH RL RLLEENLGSVSKE IASALRHQGTTF+ LLAR EKA EQGD+ FF SGEA R PGP T +G GD G GSTDDWESE S+ VG GG+ + D G+ ++SF P G G G+ + G T A + L A ++ G T S +S+G G ++ V+VDRDLQSKINAFTN+ K+LCKLE++RQD+K +WYEVRSSMRL WLK KQ I PVEVICSFQ +H D PAGSAN IVARLQR
Sbjct: 55 QQLLAQQA-EEMRKSAKRAANRRSANTCRLRKKFFVENMADANERMRKRARVLSLLPDMILAMRRDGVITYASENCRQFLQFTRQEVEGTNIFDLVESGSHNRLWRLLEENLGSVSKEAIASALRHQGTTFESLLARAEKAKEQGDSGFFTMSGEAPR-FPGPTR---------TGSGGSGXXAGDMG-----------------------------GSTDDWESEGASLVGASQRRTXXXXXXXXXXXXXXXXXXXXXXXXXRKIKRWSTVGSXXXXXXXXXXXXXXXXXXGGVGKGKDA---GKYRRSFPPLGPPAFPVLASGEKVTGGGSXXXXXXXXXXXXXANGVVGGTRHAKGAGSLLPEGARAREVGGAATKLELCSDAQGESAGGGPISXXXXXXXXXXXKASMVNVDRDLQSKINAFTNTQKDLCKLEIMRQDQKFEWYEVRSSMRLAWLKAKQMIIPVEVICSFQQMHTDCPAGSANGIVARLQR 506
BLAST of mRNA_F-distichus_contig10148.118.1 vs. uniprot
Match: D7FNF3_ECTSI (PAS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNF3_ECTSI) HSP 1 Score: 316 bits (810), Expect = 1.340e-91 Identity = 224/473 (47.36%), Postives = 259/473 (54.76%), Query Frame = 2
Query: 260 SAKRAANRKSASTCRAKKKFLVDNMAEANNRMRKRLRVLSLLPDMILAMRRDGVVTYASKNCRQFLKFTREEVQGANIFDIVESGSHERLRRLLEENLGSVSKETIASALRHQGTTFQDLLARCEKANEQGDTRFFAASGEALRVLPGPVPSKRAKIAAATTGATNGVSKGDRGRTSASISDNGGGIRKMTSGSGSAGTAEVDGSTDDWESEVNSMSAYEVG---GGG------------------IARKADVTSLGRVKKS-------FRPFGTAGRGAEMKSRNGSDHGVGPASI----SGRTLA-------------------------TLSAAAALVSPAECKKAKGGDTTRSSTGGSDSSGD----GSVTGSQ----------GAVSVDRDLQSKINAFTNSHKELCKLEVVRQDKKSDWYEVRSSMRLVWLKNKQEIAPVEVICSFQPIHMDGPAGSANSIVARLQR 1465
SAKRAANR+SA+TCR +KKF V+NMA+AN RMRKR RVLSLLPDMILAMRRDGV+TYAS+NCRQFL+FTR+EV+G NIFD+VESGSH RLRRLLEENLGSVSKE IASALRHQGTTF+ LLAR EKA EQGD FF SGEA R PGP + R GD G GSTDDWESE S++ G G I R + V S G S AG+G + S +GP + SG + + P K + G R SD+ G+ G ++G V+VDRDLQSKINAFTN+ K+LCKLE++RQD+K +WYEVRSSMRL WLK KQ I PVEVICSFQ +H D PAGSAN IVARLQR
Sbjct: 52 SAKRAANRRSANTCRLRKKFFVENMADANERMRKRARVLSLLPDMILAMRRDGVITYASENCRQFLQFTRQEVEGTNIFDLVESGSHNRLRRLLEENLGSVSKEAIASALRHQGTTFESLLARAEKAKEQGDFGFFTMSGEAPR-FPGPTRTGRGXX----XXXXXXXXVGDMG-----------------------------GSTDDWESEAASLAGESQGRKTGASXXXXXXXXXXXXXXXXRKIKRWSTVGSSGSGGLSDXXXXXXXXXXXXAGKGKDAWKYRRSFPPLGPPAFPVVASGERVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLLPEGAKAREVGGAARKLELCSDAQGERAGGGPISGGXXXXXXXXXKASMVNVDRDLQSKINAFTNTQKDLCKLEIMRQDQKFEWYEVRSSMRLAWLKAKQMIIPVEVICSFQQMHTDCPAGSANGIVARLQR 490
BLAST of mRNA_F-distichus_contig10148.118.1 vs. uniprot
Match: A0A6H5KM69_9PHAE (PAS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KM69_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 1.340e-15 Identity = 50/113 (44.25%), Postives = 77/113 (68.14%), Query Frame = 2
Query: 215 MQQLIEQQAAEEMRKSAKRAANRKSASTCRAKKKFLVDNMAEANNRMRKRLRVLSLLPDMILAMRRDGVVTYASKNCRQFLKFTREEVQGANIFDIVESGSHERLRRLLEENL 553
+ ++IE+ ++ ++ KRAANRKSAST RA+KK VD+M N RM++ VLS+LPD++LA+ R G +TY S C+ L + E++ GANIF++V H LR+++ +NL
Sbjct: 18 LSRIIEEHRRQDEKRRVKRAANRKSASTSRARKKAYVDDMTAKNERMKQHALVLSMLPDLVLAVCRTGEMTYVSPACQWLLLHSPEDMTGANIFELVAPECHPLLRKIISDNL 130
BLAST of mRNA_F-distichus_contig10148.118.1 vs. uniprot
Match: A0A835Z9B4_9STRA (BZIP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B4_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.860e-14 Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 2
Query: 266 KRAANRKSASTCRAKKKFLVDNMAEANNRMRKRLRVLSLLPDMILAMRRDGVVTYASKNCRQFLKFTREEVQGANIFDIVESGSHERLRRLL 541
KRAANRKSAS RA+KK V+ M+ N+RMR+ ++L+LLPD+I+A+ R G V+Y S C FL+ EE++G ++FD+V H L LL
Sbjct: 2 KRAANRKSASASRARKKTFVEEMSIENDRMRRNAQILALLPDLIVALCRRGTVSYVSGACEAFLQKRSEEMRGMSMFDLVTPECHGALSLLL 93
BLAST of mRNA_F-distichus_contig10148.118.1 vs. uniprot
Match: A0A7S2V9B7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V9B7_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.740e-13 Identity = 50/142 (35.21%), Postives = 83/142 (58.45%), Query Frame = 2
Query: 254 RKSAKRAANRKSASTCRAKKKFLVDNMAEANNRMRKRLRVLSLLPDMILAMRRDGVVTYASKNCRQFLKFTREEVQGANIFDIVESGSHERLRRLLEENLGSVSKETIASALRHQGTTFQDLLARCEKANEQGDTRFFAASG 679
+++AKR ANRKSAST RA+KK V M E N R++++ +LSLLPDM++A+ G +T+ S + L+F E+ GAN+ +++ S E+L RL++ LG K A+ + +G +A++ G++ + G
Sbjct: 257 KRNAKRIANRKSASTSRARKKAYVQEMTELNARLKRQALILSLLPDMVIAIGESGDITFCSAQVERVLRFDSAELVGANLSNLLVPSSKEKLNRLIKRLLGGSPKVASAATGQVRGLKTAASATAAAEASDPGESNNTVSGG 398
BLAST of mRNA_F-distichus_contig10148.118.1 vs. uniprot
Match: A0A835Z3F0_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3F0_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.280e-12 Identity = 45/102 (44.12%), Postives = 67/102 (65.69%), Query Frame = 2
Query: 248 EMRKSAKRAANRKSASTCRAKKKFLVDNMAEANNRMRKRLRVLSLLPDMILAMRRDGVVTYASKNCRQFLKFTREEVQGANIFDIVESGSHERLRRLLEENL 553
E +K KRAANRKSAS RA+KK V+ M N RMR+ ++L+LLPD+I+A+ R G V+Y S C L+ + E+++G ++F +V H+ LR L+ + L
Sbjct: 40 EEKKLLKRAANRKSASASRARKKTFVEEMTIENERMRRNAQILALLPDLIVALSRAGAVSYVSGACETLLQRSTEDMRGTSLFALVTPDCHDTLRALIADTL 141
BLAST of mRNA_F-distichus_contig10148.118.1 vs. uniprot
Match: A0A7S2UHM5_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHM5_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 2.150e-11 Identity = 48/113 (42.48%), Postives = 73/113 (64.60%), Query Frame = 2
Query: 248 EMRKSAKRAANRKSASTCRAKKKFLVDNMAEANNRMRKRLRVLSLLPDMILAMRRDGVVTYASKNCRQFLKFTREEVQGANIFDIVESGSHERLRRLLEENLGSV-SKETIAS 583
E +++AKR ANRKSA T RA+KK LV+ M + N R+R++ +LSLLPDM++A+ DG +T+ S + L+ ++ GA + DI+ S E L RL + + + SKET A+
Sbjct: 407 EEKRTAKRVANRKSACTSRARKKALVEEMTKTNARLRRQAMILSLLPDMVVAITEDGEITFCSAQVERILRHPVTDLVGAKLTDILVPSSREALDRLTSDLVATEESKETDAN 519
BLAST of mRNA_F-distichus_contig10148.118.1 vs. uniprot
Match: A0A1Z5KQK3_FISSO (PAS domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQK3_FISSO) HSP 1 Score: 76.3 bits (186), Expect = 3.230e-10 Identity = 43/119 (36.13%), Postives = 71/119 (59.66%), Query Frame = 2
Query: 224 LIEQQAAEEMRKSAKRAANRKSASTCRAKKKFLVDNMAEANNRMRKRLRVLSLLPDMILAMRRDGVVTYASKNCRQFLKFTREEVQGANIFDIVESGSHERLRRLLEENLGSVSKETIA 580
++ + E +K AKR ANRKSAST RA+KK LV M E N R++++ +LSLLPD+++ + DGVVT+ ++ + L ++ G + +I+ S RL L++ S ++ I+
Sbjct: 126 MLSEMKRREEKKHAKRLANRKSASTSRARKKALVQEMTELNARLKRQALILSLLPDLVIVVNLDGVVTFCNEQVERVLSHKSSDLVGTKLVNILVPSSRRRLENLMKTLSKSSHRDPIS 244
BLAST of mRNA_F-distichus_contig10148.118.1 vs. uniprot
Match: A0A7S0FQU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FQU9_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 5.610e-9 Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 2
Query: 248 EMRKSAKRAANRKSASTCRAKKKFLVDNMAEANNRMRKRLRVLSLLPDMILAMRRDGVVTYASKNCRQFLKFTREEV 478
E R+ KRA+NR+SAST RA+KK LV+ M N ++R++ +LSLLPDM+LA+ DGV+T+ S + L+ E++
Sbjct: 97 EERRINKRASNRRSASTSRARKKALVEEMTRLNAQLRRQALILSLLPDMVLAINVDGVITFCSAQAERILQHNSEDL 173
BLAST of mRNA_F-distichus_contig10148.118.1 vs. uniprot
Match: A0A7S3VAF3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAF3_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.530e-8 Identity = 38/100 (38.00%), Postives = 66/100 (66.00%), Query Frame = 2
Query: 248 EMRKSAKRAANRKSASTCRAKKKFLVDNMAEANNRMRKRLRVLSLLPDMILAMRRDGVVTYASKNCRQFLKFTREEVQGANIFDIVESGSHERLRRLLEE 547
E +++AKR ANR+SA T RA+KK LV M + N R+R++ +LSLLPD+++A++ DG +T+ S + L+ ++ GANI +++ S + L+++
Sbjct: 624 EEKRAAKRIANRRSACTSRARKKALVAEMTKTNARLRRQAVILSLLPDLVIAIKVDGEITFCSAQVERVLRHKVRDMVGANIGEVLTPSSRAHISGLIDK 723 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10148.118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10148.118.1 >prot_F-distichus_contig10148.118.1 ID=prot_F-distichus_contig10148.118.1|Name=mRNA_F-distichus_contig10148.118.1|organism=Fucus distichus monoicous|type=polypeptide|length=694bp MPSAVGHHPAYLHHQTPHVHPHPHYQAVAAAAAAATVAPAPSVHMQQLIEback to top mRNA from alignment at F-distichus_contig10148:1775..6893+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10148.118.1 ID=mRNA_F-distichus_contig10148.118.1|Name=mRNA_F-distichus_contig10148.118.1|organism=Fucus distichus monoicous|type=mRNA|length=5119bp|location=Sequence derived from alignment at F-distichus_contig10148:1775..6893+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10148:1775..6893+ >mRNA_F-distichus_contig10148.118.1 ID=mRNA_F-distichus_contig10148.118.1|Name=mRNA_F-distichus_contig10148.118.1|organism=Fucus distichus monoicous|type=CDS|length=4164bp|location=Sequence derived from alignment at F-distichus_contig10148:1775..6893+ (Fucus distichus monoicous)back to top |