mRNA_F-distichus_contig10118.92.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10118.92.1 vs. uniprot
Match: D7FSP4_ECTSI (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSP4_ECTSI) HSP 1 Score: 132 bits (332), Expect = 1.250e-33 Identity = 68/108 (62.96%), Postives = 83/108 (76.85%), Query Frame = 1
Query: 1 TLTASSKIGDPTNDVFVWRVWDDKSTVLEGRELTYVFKTVGRQRVTLSQTVVTTGNTYYMEAYVMVKYVRREIRQLTDQDREAFLNAVEAIYRLPTAQGRAIYGKEYR 324
T TASS +G P DVF W D TVLEGRE+ + FKT+GRQRV+LSQ VV+TGNT+ VMVKYVRREIR LTD+DREAF +A+E +YRLPT +GR +YG+EY+
Sbjct: 135 TFTASSTLGRPDEDVFKWSFED--GTVLEGREVKHNFKTLGRQRVSLSQIVVSTGNTHETVGSVMVKYVRREIRSLTDKDREAFFDAMETLYRLPTVEGRELYGEEYK 240
BLAST of mRNA_F-distichus_contig10118.92.1 vs. uniprot
Match: A0A6H5KFJ6_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ6_9PHAE) HSP 1 Score: 129 bits (323), Expect = 8.050e-33 Identity = 65/109 (59.63%), Postives = 82/109 (75.23%), Query Frame = 1
Query: 1 TLTASSKIGDPTNDVFVWRVWDDKSTVLEGRELTYVFKTVGRQRVTLSQTVVTTGNTYYMEAYVMVKYVRREIRQLTDQDREAFLNAVEAIYRLPTAQGRAIYGKEYRV 327
TLTA S +GDP DVF W D TVLEGRE+TY+FK VG Q V L+QT+V+TG +E VMVKYVRRE+RQL +DREAFL+A+E +YRLPT +G A+YG +Y++
Sbjct: 39 TLTAGSSVGDPDKDVFKWSFED--GTVLEGREVTYIFKGVGAQTVFLAQTIVSTGRIVQIEDTVMVKYVRREVRQLRAEDREAFLDAMETLYRLPTEEGVALYGDDYKM 145
BLAST of mRNA_F-distichus_contig10118.92.1 vs. uniprot
Match: A0A6H5L3M0_9PHAE (PKD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M0_9PHAE) HSP 1 Score: 127 bits (320), Expect = 5.150e-32 Identity = 65/108 (60.19%), Postives = 79/108 (73.15%), Query Frame = 1
Query: 1 TLTASSKIGDPTNDVFVWRVWDDKSTVLEGRELTYVFKTVGRQRVTLSQTVVTTGNTYYMEAYVMVKYVRREIRQLTDQDREAFLNAVEAIYRLPTAQGRAIYGKEYR 324
TLTASS +GDP DVF W D TVLEGR + Y F +VG V L Q V+TGN Y M ++VMVKYVRREIRQL D+DREAF +A+E +YRLPT++G A+YG EY+
Sbjct: 120 TLTASSTVGDPDADVFQWSFGD--GTVLEGRTVEYTFTSVGLHDVALRQIDVSTGNVYRMSSHVMVKYVRREIRQLKDEDREAFFDAMETLYRLPTSEGNAVYGDEYK 225
BLAST of mRNA_F-distichus_contig10118.92.1 vs. uniprot
Match: D7G0J9_ECTSI (PKD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J9_ECTSI) HSP 1 Score: 127 bits (319), Expect = 7.170e-32 Identity = 65/108 (60.19%), Postives = 82/108 (75.93%), Query Frame = 1
Query: 1 TLTASSKIGDPTNDVFVWRVWDDKSTVLEGRELTYVFKTVGRQRVTLSQTVVTTGNTYYMEAYVMVKYVRREIRQLTDQDREAFLNAVEAIYRLPTAQGRAIYGKEYR 324
TLTA S +GDP DVF W D TVLEGRE+TY+FK VG Q V+L+QT+V+TG +E VMVKYVRRE+RQL +DREAFL+A+E +YRLPT +G A+YG +Y+
Sbjct: 122 TLTAGSSVGDPDRDVFKWSFED--GTVLEGREVTYMFKGVGAQTVSLAQTMVSTGRIVQIEDSVMVKYVRREVRQLKAEDREAFLDAMEKLYRLPTEEGVALYGDDYK 227
BLAST of mRNA_F-distichus_contig10118.92.1 vs. uniprot
Match: D7G0J8_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J8_ECTSI) HSP 1 Score: 111 bits (277), Expect = 3.870e-26 Identity = 50/107 (46.73%), Postives = 74/107 (69.16%), Query Frame = 1
Query: 4 LTASSKIGDPTNDVFVWRVWDDKSTVLEGRELTYVFKTVGRQRVTLSQTVVTTGNTYYMEAYVMVKYVRREIRQLTDQDREAFLNAVEAIYRLPTAQGRAIYGKEYR 324
L A S++G+P +DVF+W + ++ EGRE+ Y+F GR+ + L+QTV +TG Y + Y+MVKYVRREIR L + DR AF + +E +YRLPT+QG +G +Y+
Sbjct: 120 LRAESQVGNPNDDVFLWTIPNENGASFEGREIEYIFTDPGRKDIVLTQTVTSTGERYSLHTYIMVKYVRREIRALNNADRVAFFDTLETLYRLPTSQGVEEFGTDYK 226
BLAST of mRNA_F-distichus_contig10118.92.1 vs. uniprot
Match: D7G0K0_ECTSI (Tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K0_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 4.110e-22 Identity = 47/78 (60.26%), Postives = 62/78 (79.49%), Query Frame = 1
Query: 91 RELTYVFKTVGRQRVTLSQTVVTTGNTYYMEAYVMVKYVRREIRQLTDQDREAFLNAVEAIYRLPTAQGRAIYGKEYR 324
R + + FK VGR V+L Q VV+TG Y+M + VMVKYVRREIRQLTD+DREAF +A+E +YRLPT +G A+YG++Y+
Sbjct: 3 RRVKHKFKAVGRHEVSLMQIVVSTGEVYHMSSSVMVKYVRREIRQLTDKDREAFFDAMETLYRLPTGEGVALYGEDYK 80
BLAST of mRNA_F-distichus_contig10118.92.1 vs. uniprot
Match: A0A6H5JNJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ2_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 7.310e-12 Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 139 LSQTVVTTGNTYYMEAYVMVKYVRREIRQLTDQDREAFLNAVEAIYRLPTAQGRAIYGKEY 321
++ T T G + E V VKYVRREIR LTD+DRE F NAV + R+P+A GRA+YG +Y
Sbjct: 57 VAATTSTAGEIFEYEFAVTVKYVRREIRALTDRDRETFFNAVSVLQRVPSAVGRAVYGDKY 117
BLAST of mRNA_F-distichus_contig10118.92.1 vs. uniprot
Match: A0A6V1TYR0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TYR0_HETAK) HSP 1 Score: 70.1 bits (170), Expect = 1.070e-11 Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 1
Query: 46 FVWRVWDDKSTVLEGRELTYVFKTVGRQRVTLSQTVVTTGNTYYMEAYVMVKYVRREIRQLTDQDREAFLNAVEAIYRLPTAQGRAIYGKEYR 324
F W V D + L+ + F TVG + V L+ ++G+ E+ V+VKYVRREIR LTD+DR+ L+A+E IYR+ G +YG+ YR
Sbjct: 123 FTWEV-DGEVQKLKANAIDLTFTTVGLKSVKLTIADSSSGSVGNYESEVVVKYVRREIRSLTDEDRKRTLDAIETIYRVDQQTGEELYGENYR 214
BLAST of mRNA_F-distichus_contig10118.92.1 vs. uniprot
Match: A0A6H5K5A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A2_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 5.520e-11 Identity = 33/58 (56.90%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 148 TVVTTGNTYYMEAYVMVKYVRREIRQLTDQDREAFLNAVEAIYRLPTAQGRAIYGKEY 321
T T G + E V VKYVRREIR LTD+DRE F NAV + R+P+A GRA+YG +Y
Sbjct: 71 TTSTAGEIFEYEFAVTVKYVRREIRALTDRDRETFFNAVSVLQRVPSAVGRAVYGDKY 128
BLAST of mRNA_F-distichus_contig10118.92.1 vs. uniprot
Match: A0A6H5K0F0_9PHAE (Tyrosinase_Cu-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0F0_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 5.860e-11 Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 139 LSQTVVTTGNTYYMEAYVMVKYVRREIRQLTDQDREAFLNAVEAIYRLPTAQGRAIYGKEY 321
++ T T G + E V VKYVRREIR LTD+DRE F NAV + R+P+A GRA+YG +Y
Sbjct: 55 VAATTSTAGEIFEYEFVVTVKYVRREIRALTDRDRETFFNAVSVLQRVPSAVGRALYGDKY 115 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10118.92.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10118.92.1 >prot_F-distichus_contig10118.92.1 ID=prot_F-distichus_contig10118.92.1|Name=mRNA_F-distichus_contig10118.92.1|organism=Fucus distichus monoicous|type=polypeptide|length=113bp TLTASSKIGDPTNDVFVWRVWDDKSTVLEGRELTYVFKTVGRQRVTLSQTback to top mRNA from alignment at F-distichus_contig10118:5920..6921+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10118.92.1 ID=mRNA_F-distichus_contig10118.92.1|Name=mRNA_F-distichus_contig10118.92.1|organism=Fucus distichus monoicous|type=mRNA|length=1002bp|location=Sequence derived from alignment at F-distichus_contig10118:5920..6921+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10118:5920..6921+ >mRNA_F-distichus_contig10118.92.1 ID=mRNA_F-distichus_contig10118.92.1|Name=mRNA_F-distichus_contig10118.92.1|organism=Fucus distichus monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at F-distichus_contig10118:5920..6921+ (Fucus distichus monoicous)back to top |