mRNA_F-distichus_contig10112.86.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10112.86.1 vs. uniprot
Match: D8LNX3_ECTSI (Tubulin folding cofactor D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX3_ECTSI) HSP 1 Score: 255 bits (652), Expect = 1.660e-75 Identity = 128/154 (83.12%), Postives = 141/154 (91.56%), Query Frame = 1
Query: 1 TILSLGMKYLEDAGPTRDAAAACLSSLLTRPDMEASHLRCFLEWSSTVLERVTVEGRAGREGLSKLAFLVMGVMETLASLFKQGHRGKLVDLIPVVFDSVVGLAELGPGQTLLRKMLVKLLQRIGTTYLPPRVVTWRYSRGQRSLLQSLAASGD 462
TIL+LGM++L DAGPTRDAAA CLSSLLTRPDMEA+HLR FLEWS++VLERVT EGRAG EGLSKLAFLVMGVM TLA+LFKQGHR KL+DLIPVVF VVGLAELGPGQTLLRKMLVKLLQR+GTTY+PPRVV WRY RGQRSLLQ+L ++ D
Sbjct: 200 TILALGMRHLGDAGPTRDAAAGCLSSLLTRPDMEAAHLRRFLEWSASVLERVTAEGRAGEEGLSKLAFLVMGVMATLAALFKQGHREKLIDLIPVVFYPVVGLAELGPGQTLLRKMLVKLLQRVGTTYVPPRVVAWRYRRGQRSLLQNLESTPD 353
BLAST of mRNA_F-distichus_contig10112.86.1 vs. uniprot
Match: A0A6H5KH41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH41_9PHAE) HSP 1 Score: 251 bits (640), Expect = 7.850e-75 Identity = 124/150 (82.67%), Postives = 139/150 (92.67%), Query Frame = 1
Query: 1 TILSLGMKYLEDAGPTRDAAAACLSSLLTRPDMEASHLRCFLEWSSTVLERVTVEGRAGREGLSKLAFLVMGVMETLASLFKQGHRGKLVDLIPVVFDSVVGLAELGPGQTLLRKMLVKLLQRIGTTYLPPRVVTWRYSRGQRSLLQSLA 450
TIL+LG+++L DAGPTRDAAAACLSSLLTRPDMEA+HLR FLEWS++VLERVT EGRAG EGLSKLAFLVMGVM TLA+LFKQGHR KL+DLIPVVF VVGLAE+GPGQTLLRKMLVKLLQR+GTTY+PPRV+ WRY RGQRSLLQ+ +
Sbjct: 111 TILALGIRHLGDAGPTRDAAAACLSSLLTRPDMEAAHLRRFLEWSASVLERVTAEGRAGEEGLSKLAFLVMGVMATLAALFKQGHREKLIDLIPVVFYPVVGLAEVGPGQTLLRKMLVKLLQRVGTTYVPPRVIAWRYRRGQRSLLQAAS 260
BLAST of mRNA_F-distichus_contig10112.86.1 vs. uniprot
Match: A0A2R5GKZ4_9STRA (Tubulin-specific chaperone D n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKZ4_9STRA) HSP 1 Score: 148 bits (373), Expect = 5.820e-38 Identity = 78/153 (50.98%), Postives = 102/153 (66.67%), Query Frame = 1
Query: 1 TILSLGMKYLEDAGPTRDAAAACLSSLLTRPDMEASHLRCFLEWSSTVLERVTVEGRAGREGLSKLAFLVMGVMETLASLFKQGHRGKLVDLIPVVFDSVVGLAEL-GPGQTLLRKMLVKLLQRIGTTYLPPRVVTWRYSRGQRSLLQSLAAS 456
T+ L +L D+G TR+AAA CL+ LLTRPDME+ HL FL W++ LE V+ + R G E S+ FL+ G+ L +FK GHR KL+ IPV+F V+ ++ G +L RK+ VKL+QR G +LPPRVV WRY RGQRSLLQ+LA S
Sbjct: 223 TVTDLCKAFLNDSGATREAAAICLARLLTRPDMESVHLEGFLNWAADTLEDVS-DRREGGESRSEDPFLITGIFHALVEIFKHGHREKLLSHIPVIFSRVLRISNRDGQVSSLERKLTVKLVQRAGLNFLPPRVVKWRYQRGQRSLLQNLAKS 374
BLAST of mRNA_F-distichus_contig10112.86.1 vs. uniprot
Match: A0A7S1CET7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CET7_9STRA) HSP 1 Score: 137 bits (346), Expect = 8.860e-36 Identity = 76/154 (49.35%), Postives = 95/154 (61.69%), Query Frame = 1
Query: 1 TILSLGMKYLEDAGPTRDAAAACLSSLLTRPDMEASHLRCFLEWSSTVLERVTVEGRAGREGLSKLAFLVMGVMETLASLFKQGHRGKLVDLIPVVFDSVVGLAELGP-GQTLLRKMLVKLLQRIGTTYLPPRVVTWRYSRGQRSLLQSLAASG 459
+I++ YL D G RDAAA CL LLTRPDM+ HL+ FL WS +VLE RA + FL GV +L + K GHR L + +P++F VV L+ G LLRK++VKL QR G TYLPPRVV WRY RGQRSLL +L+ +G
Sbjct: 223 SIVATCQSYLGDPGAVRDAAAVCLGQLLTRPDMDTDHLKRFLTWSDSVLESSL---RADAQ-----QFLTTGVFTSLVHIAKSGHREVLRETLPIIFGRVVELSAAGTMSSPLLRKLIVKLAQRTGLTYLPPRVVAWRYKRGQRSLLDNLSGAG 368
BLAST of mRNA_F-distichus_contig10112.86.1 vs. uniprot
Match: A0A7S0SYG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SYG7_9STRA) HSP 1 Score: 129 bits (323), Expect = 7.130e-35 Identity = 70/148 (47.30%), Postives = 100/148 (67.57%), Query Frame = 1
Query: 7 LSLGMKYLEDAGPTRDAAAACLSSLLTRPDMEASHLRCFLEWSSTVLER-VTVEGRAGREGLSKLAFLVMGVMETLASLFKQGHRGKLVDLIPVVFDSVVGLAELGPGQTLLRKMLVKLLQRIGTTYLPPRVVTWRYSRGQRSLLQSL 447
+S+ + L D GPTR+AAA CLS+LLTRPDME + L +L+ +++ +T+ +AG E LS +F ++G + L+ +FK GHR KL+ + D ++ L+ L QTL+RK++ K +QRIG TYLPPRV WRY RGQRSLL +L
Sbjct: 1 VSICIDSLRDTGPTREAAAVCLSTLLTRPDMEINILGKYLQSIQIIIQSWLTLGSQAGLE-LSTKSFEILGNFQCLSQIFKSGHRLKLLPYTNDLLDLIIQLSNLS-NQTLMRKLITKTIQRIGLTYLPPRVTKWRYQRGQRSLLVNL 146
BLAST of mRNA_F-distichus_contig10112.86.1 vs. uniprot
Match: A0A835ZJS0_9STRA (Tubulin folding cofactor D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS0_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.320e-34 Identity = 75/149 (50.34%), Postives = 98/149 (65.77%), Query Frame = 1
Query: 4 ILSLGMKYLEDAGPTRDAAAACLSSLLTRPDMEASHLRCFLEWSSTVLERVTVEGRAGREGLSKLAFLVMGVMETLASLFKQGHRGKLVDLIPVVFDSVVGLAELGPGQTLLRKMLVKLLQRIGTTYLPPRVVTWRYSRGQRSLLQSLA 450
I +L + +L DA TRDAAA CL++LL+RPDM+ + L F+ ++ LER G A E + AF V G + TLA+LFK+G R L+ + + + +A G QTLLRKM+VKL QRIG +LPPRVV WRY RGQRSLLQ+LA
Sbjct: 216 IAALAIAHLSDAAATRDAAAVCLAALLSRPDMDGAPLDGFVAYALAALERAARGGAA--EEATGAAFAVRGALATLAALFKRGARAALLPVAQRLLAPLAAIAAQGSSQTLLRKMVVKLFQRIGLAFLPPRVVAWRYQRGQRSLLQNLA 362
BLAST of mRNA_F-distichus_contig10112.86.1 vs. uniprot
Match: A0A482T0T9_9ARCH (TFCD_C domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T0T9_9ARCH) HSP 1 Score: 135 bits (339), Expect = 2.090e-33 Identity = 68/151 (45.03%), Postives = 103/151 (68.21%), Query Frame = 1
Query: 4 ILSLGMKYLEDAGPTRDAAAACLSSLLTRPDMEASHLRCFLEWSSTVLERVTVEGRAGREGLSKLAFLVMGVMETLASLFKQGHRGKLVDLIPVVFDSVVGLAELGPGQTLLRKMLVKLLQRIGTTYLPPRVVTWRYSRGQRSLLQSLAAS 456
++S+ M YL+++GPTR+AA CL++L TRPDME+ HL FL ++ VL+R V+ ++ ++ F +G++ L +FK+GHR KLV LI +V+ + LA QT+ RK+L KL+QR+G T+LPP+ +WRY RGQRSL+ +L S
Sbjct: 23 LISVAMSYLDESGPTREAAGFCLANLFTRPDMESQHLEAFLRSTAVVLQR-RVDSKSSSN--NREYFEYIGMLSCLNQIFKRGHRSKLVPLIHLVYANATSLAN-SATQTIERKLLCKLIQRLGMTFLPPKEASWRYQRGQRSLMSNLIKS 169
BLAST of mRNA_F-distichus_contig10112.86.1 vs. uniprot
Match: A0A7S2WC38_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WC38_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.930e-33 Identity = 71/151 (47.02%), Postives = 96/151 (63.58%), Query Frame = 1
Query: 1 TILSLGMKYLEDAGPTRDAAAACLSSLLTRPDMEASHLRCFLEWSSTVLERVTVEGRAGREGLSKLAFLVMGVMETLASLFKQGHRGKLVDLIPVVFDSVVGLAEL-GPGQTLLRKMLVKLLQRIGTTYLPPRVVTWRYSRGQRSLLQSLA 450
++L L YL D GP R AA+ CL+ L TRPDME+ +L FL W++ LE + ++ R E LS FL+ GV ++L +FK GHR KLV IP++F V+ + G +L RK+ +KL+QR G +LPP+VV WRY RGQRSLL A
Sbjct: 206 SVLELCKGYLSDPGPPRGAASLCLARLTTRPDMESRYLEEFLGWAAQTLEDI-IKRRTSDESLSTDTFLITGVFQSLVEIFKYGHREKLVSHIPIIFSRVLMITNRDGNISSLERKLTMKLVQRSGLNFLPPKVVKWRYQRGQRSLLHGAA 355
BLAST of mRNA_F-distichus_contig10112.86.1 vs. uniprot
Match: A0A7S3ME63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3ME63_9STRA) HSP 1 Score: 126 bits (317), Expect = 7.360e-32 Identity = 68/143 (47.55%), Postives = 93/143 (65.03%), Query Frame = 1
Query: 28 LEDAGPTRDAAAACLSSLLTRPDMEASHLRCFLEWSSTVLERVTVEGRAGREGLSKLAFLVMGVMETLASLFKQGHRGKLVDLIPVVFDSVVGLAELGPGQTLLRKMLVKLLQRIGTTYLPPRVVTWRYSRGQRSLLQSLAAS 456
++D GPTR+AA+ CLS LLTRPDME +HL F+ WS ++L+ + A R LS FL++G + + ++K GHR KL+ P++ + L E G QT RK+L KL+QRIG +LPPRV WRY RG RSL +LA+S
Sbjct: 194 MQDTGPTREAASVCLSVLLTRPDMETAHLHEFMTWSISLLDSWSHLPPAERSNLSSQYFLILGDLHCVFQIYKLGHRLKLLPYGPLLLPHCLRLIE-GNSQTSTRKLLTKLIQRIGMNFLPPRVAAWRYLRGNRSL--NLASS 333
BLAST of mRNA_F-distichus_contig10112.86.1 vs. uniprot
Match: K0R7E2_THAOC (TFCD_C domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R7E2_THAOC) HSP 1 Score: 127 bits (318), Expect = 1.390e-30 Identity = 80/185 (43.24%), Postives = 106/185 (57.30%), Query Frame = 1
Query: 1 TILSLGMKYLEDAGPTRDAAAACLSSLLTRPDMEASHLRCFLEWSSTVLERVTVEGRAG-------------REGLSKLAFLVMGVMETLASLFKQGHRGKLVDL------IPVVFDSVVGLAE--LGPGQTLLRKMLVKLLQRIGTTYLPPRVVTWRYSRGQRSLLQSLAASGDKNNGNQSAPT 492
+IL +L+D G TRD AAACL+SLL+RPD+E L F+ WSS R + R G +G F VMGV++TLA++FK GHR L+ + +++ + LAE + G +LRK+LVKL RIG YLPPRV TWRYSRG+RSLL +L N GN++A T
Sbjct: 249 SILKTSASHLDDHGATRDTAAACLASLLSRPDLEELELEGFIVWSS----RTILSFRTGVINDALPHAQLPLPDGSKPSNFRVMGVIQTLAAIFKCGHRSTLLSTKQRLAGVEALWEQCILLAECRVVNGSIILRKLLVKLFARIGCAYLPPRVATWRYSRGKRSLLDNLI-----NGGNEAAQT 424 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10112.86.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10112.86.1 >prot_F-distichus_contig10112.86.1 ID=prot_F-distichus_contig10112.86.1|Name=mRNA_F-distichus_contig10112.86.1|organism=Fucus distichus monoicous|type=polypeptide|length=173bp MKYLEDAGPTRDAAAACLSSLLTRPDMEASHLRCFLEWSSTVLERVTVEGback to top mRNA from alignment at F-distichus_contig10112:3302..8091- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10112.86.1 ID=mRNA_F-distichus_contig10112.86.1|Name=mRNA_F-distichus_contig10112.86.1|organism=Fucus distichus monoicous|type=mRNA|length=4790bp|location=Sequence derived from alignment at F-distichus_contig10112:3302..8091- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10112:3302..8091- >mRNA_F-distichus_contig10112.86.1 ID=mRNA_F-distichus_contig10112.86.1|Name=mRNA_F-distichus_contig10112.86.1|organism=Fucus distichus monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at F-distichus_contig10112:3302..8091- (Fucus distichus monoicous)back to top |