mRNA_F-distichus_contig100308.34.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig100308.34.1
Unique NamemRNA_F-distichus_contig100308.34.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
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BLAST of mRNA_F-distichus_contig100308.34.1 vs. uniprot
Match: A0A6H5J605_9PHAE (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J605_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 3.280e-50
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 1 
Query:    1 VFGSALGMEGQLSVLHFQGGPCYRCIFPAPLAAEAGRRCSDNGVLGTVPGVIGCLQATEALKVLGEFGEPLSGMLCTFDAQDGSFYTIRLRPR 279
            V GSALGMEGQ+SV H +GGPCYRC+FPAPLAAEAGRRCSDNGVLGT+PGVIGCLQATEALKVLG FG PL G LCT+D QDGSFYT+RLRPR
Sbjct:  241 VSGSALGMEGQVSVFHHRGGPCYRCVFPAPLAAEAGRRCSDNGVLGTIPGVIGCLQATEALKVLGGFGSPLVGRLCTYDGQDGSFYTVRLRPR 333
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BLAST of mRNA_F-distichus_contig100308.34.1 vs. uniprot
Match: A0A7I8IUT7_SPIIN (Adenylyltransferase and sulfurtransferase MOCS3 n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8IUT7_SPIIN)

HSP 1 Score: 124 bits (311), Expect = 4.640e-32
Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = 1 
Query:    1 VFGSALGMEGQLSVLHFQGGPCYRCIFPAPLAAEAGRRCSDNGVLGTVPGVIGCLQATEALKVLGEFGEPLSGMLCTFDAQDGSFYTIRLRPR 279
            V G+ALG+EGQL+V H+ GGPCYRC+FP P  A A +RCSD+GVLG VPG+IGCLQA EA+KV    G+PLSG +  FDA  G    ++LR R
Sbjct:  160 VSGAALGLEGQLTVYHYNGGPCYRCLFPTPPPATACQRCSDSGVLGVVPGIIGCLQALEAIKVASSIGKPLSGRMLLFDALSGHIRIVKLRGR 252
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BLAST of mRNA_F-distichus_contig100308.34.1 vs. uniprot
Match: A0A7S2CFX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFX3_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.110e-31
Identity = 56/93 (60.22%), Postives = 70/93 (75.27%), Query Frame = 1 
Query:    1 VFGSALGMEGQLSVLHFQGGPCYRCIFPAPLAAEAGRRCSDNGVLGTVPGVIGCLQATEALKVLGEFGEPLSGMLCTFDAQDGSFYTIRLRPR 279
            + GSA+G+EGQL+V +++GGPCYRC++P PL AEA R CSD GVLG VPGVIG LQATE LKVL  FGE LS  L  +DA+  +F+  +L  R
Sbjct:   97 ISGSAVGLEGQLTVYNYEGGPCYRCVYPKPLPAEASRACSDAGVLGPVPGVIGVLQATETLKVLSGFGEVLSRTLIMYDARSCTFHRFKLPGR 189
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BLAST of mRNA_F-distichus_contig100308.34.1 vs. uniprot
Match: A0A7I8KJ59_SPIIN (Adenylyltransferase and sulfurtransferase MOCS3 n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KJ59_SPIIN)

HSP 1 Score: 124 bits (311), Expect = 1.630e-31
Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = 1 
Query:    1 VFGSALGMEGQLSVLHFQGGPCYRCIFPAPLAAEAGRRCSDNGVLGTVPGVIGCLQATEALKVLGEFGEPLSGMLCTFDAQDGSFYTIRLRPR 279
            V G+ALG+EGQL+V H+ GGPCYRC+FP P  A A +RCSD+GVLG VPG+IGCLQA EA+KV    G+PLSG +  FDA  G    ++LR R
Sbjct:  248 VSGAALGLEGQLTVYHYNGGPCYRCLFPTPPPATACQRCSDSGVLGVVPGIIGCLQALEAIKVASSIGKPLSGRMLLFDALSGHIRIVKLRGR 340
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BLAST of mRNA_F-distichus_contig100308.34.1 vs. uniprot
Match: M1CT04_SOLTU (Molybdopterin synthase sulphurylase n=3 Tax=Solanoideae TaxID=424551 RepID=M1CT04_SOLTU)

HSP 1 Score: 120 bits (300), Expect = 2.550e-31
Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 1 
Query:    1 VFGSALGMEGQLSVLHFQGGPCYRCIFPAPLAAEAGRRCSDNGVLGTVPGVIGCLQATEALKVLGEFGEPLSGMLCTFDAQDGSFYTIRLRPR 279
            V G+ALG+EGQL+V ++ GGPCYRC+FP P    A +RC+D+GVLG VPGVIGCLQA EA+KV    GEPLSG +   DA  G F  ++LR R
Sbjct:   34 VSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTNACQRCADSGVLGVVPGVIGCLQALEAIKVASLVGEPLSGRMLLLDALSGRFRNVKLRGR 126
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BLAST of mRNA_F-distichus_contig100308.34.1 vs. uniprot
Match: A0A5B6U4X1_9ROSI (Adenylyltransferase and sulfurtransferase MOCS3-like n=1 Tax=Gossypium australe TaxID=47621 RepID=A0A5B6U4X1_9ROSI)

HSP 1 Score: 119 bits (298), Expect = 2.660e-31
Identity = 52/93 (55.91%), Postives = 69/93 (74.19%), Query Frame = 1 
Query:    1 VFGSALGMEGQLSVLHFQGGPCYRCIFPAPLAAEAGRRCSDNGVLGTVPGVIGCLQATEALKVLGEFGEPLSGMLCTFDAQDGSFYTIRLRPR 279
            V G+ALG+EGQL+V +++GGPCYRC+FP P    A +RCSD+GVLG VPG+IGCLQA EA+K+  + GEPLSG +  FDA       +++R R
Sbjct:    5 VSGAALGLEGQLTVYNYKGGPCYRCLFPTPPPTTACQRCSDSGVLGVVPGIIGCLQALEAIKIASDIGEPLSGRMLLFDALSARIRIVKIRGR 97
[Close]
BLAST of mRNA_F-distichus_contig100308.34.1 vs. uniprot
Match: S8C363_9LAMI (Rhodanese domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C363_9LAMI)

HSP 1 Score: 122 bits (307), Expect = 3.520e-31
Identity = 55/91 (60.44%), Postives = 69/91 (75.82%), Query Frame = 1 
Query:    1 VFGSALGMEGQLSVLHFQGGPCYRCIFPAPLAAEAGRRCSDNGVLGTVPGVIGCLQATEALKVLGEFGEPLSGMLCTFDAQDGSFYTIRLR 273
            V G+ALG+EGQL+V +F GGPCYRC+FP P  + A +RC+D+GVLG VPG+IGCLQA EA+KV G  GEPLSG +  FDA    F  +R+R
Sbjct:  198 VSGAALGLEGQLTVYNFNGGPCYRCLFPTPPPSTACQRCADSGVLGVVPGIIGCLQALEAIKVTGGIGEPLSGRMLLFDAISSRFRVVRIR 288
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BLAST of mRNA_F-distichus_contig100308.34.1 vs. uniprot
Match: M1C0K0_SOLTU (Molybdopterin synthase sulphurylase n=2 Tax=Solanum tuberosum TaxID=4113 RepID=M1C0K0_SOLTU)

HSP 1 Score: 120 bits (300), Expect = 9.620e-31
Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 1 
Query:    1 VFGSALGMEGQLSVLHFQGGPCYRCIFPAPLAAEAGRRCSDNGVLGTVPGVIGCLQATEALKVLGEFGEPLSGMLCTFDAQDGSFYTIRLRPR 279
            V G+ALG+EGQL+V ++ GGPCYRC+FP P    A +RC+D+GVLG VPGVIGCLQA EA+KV    GEPLSG +   DA  G F  ++LR R
Sbjct:  208 VSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTNACQRCADSGVLGVVPGVIGCLQALEAIKVASLVGEPLSGRMLLLDALSGRFRNVKLRGR 300
[Close]
BLAST of mRNA_F-distichus_contig100308.34.1 vs. uniprot
Match: A0A2G3C2Q5_CAPCH (Adenylyltransferase and sulfurtransferase MOCS3 (Fragment) n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3C2Q5_CAPCH)

HSP 1 Score: 120 bits (300), Expect = 9.620e-31
Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 1 
Query:    1 VFGSALGMEGQLSVLHFQGGPCYRCIFPAPLAAEAGRRCSDNGVLGTVPGVIGCLQATEALKVLGEFGEPLSGMLCTFDAQDGSFYTIRLRPR 279
            V G+ALG+EGQL+V ++ GGPCYRC+FP P    A +RC+D+GVLG VPGVIGCLQA EA+KV    GEPLSG +   DA  G F  ++LR R
Sbjct:  206 VSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTNACQRCADSGVLGVVPGVIGCLQALEAIKVASFVGEPLSGRMLLLDAVSGRFRNVKLRGR 298
[Close]
BLAST of mRNA_F-distichus_contig100308.34.1 vs. uniprot
Match: A0A7J6WBG4_THATH (Adenylyltransferase and sulfurtransferase mocs3 n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6WBG4_THATH)

HSP 1 Score: 116 bits (291), Expect = 1.080e-30
Identity = 52/93 (55.91%), Postives = 67/93 (72.04%), Query Frame = 1 
Query:    1 VFGSALGMEGQLSVLHFQGGPCYRCIFPAPLAAEAGRRCSDNGVLGTVPGVIGCLQATEALKVLGEFGEPLSGMLCTFDAQDGSFYTIRLRPR 279
            + G+A+G+EGQL+V + +GGPCYRC+FP P    A +RCSD+GVLG VPGVIGCLQA EA+KV    GEPLSG +  FDA       +++R R
Sbjct:   70 LLGAAVGLEGQLTVYNHEGGPCYRCLFPTPPPTSACQRCSDSGVLGVVPGVIGCLQALEAIKVASSVGEPLSGRMLLFDALSARIRIVKIRGR 162
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig100308.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J605_9PHAE3.280e-5084.95Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
A0A7I8IUT7_SPIIN4.640e-3260.22Adenylyltransferase and sulfurtransferase MOCS3 n=... [more]
A0A7S2CFX3_9STRA1.110e-3160.22Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7I8KJ59_SPIIN1.630e-3160.22Adenylyltransferase and sulfurtransferase MOCS3 n=... [more]
M1CT04_SOLTU2.550e-3159.14Molybdopterin synthase sulphurylase n=3 Tax=Solano... [more]
A0A5B6U4X1_9ROSI2.660e-3155.91Adenylyltransferase and sulfurtransferase MOCS3-li... [more]
S8C363_9LAMI3.520e-3160.44Rhodanese domain-containing protein (Fragment) n=1... [more]
M1C0K0_SOLTU9.620e-3159.14Molybdopterin synthase sulphurylase n=2 Tax=Solanu... [more]
A0A2G3C2Q5_CAPCH9.620e-3159.14Adenylyltransferase and sulfurtransferase MOCS3 (F... [more]
A0A7J6WBG4_THATH1.080e-3055.91Adenylyltransferase and sulfurtransferase mocs3 n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig100308contigF-distichus_contig100308:730..1900 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score169.5
Seed ortholog evalue7e-40
Seed eggNOG ortholog2880.D7FNE1
Preferred namecnxF
KEGG rclassRC00043
KEGG koko:K11996,ko:K18469
KEGG ReactionR07459,R07461
KEGG Pathwayko04122,map04122
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001403,GO:0001558,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007114,GO:0008033,GO:0008150,GO:0008152,GO:0008265,GO:0008641,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009451,GO:0009987,GO:0010467,GO:0010570,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0016783,GO:0016874,GO:0016877,GO:0018117,GO:0018130,GO:0018175,GO:0019008,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0019954,GO:0030447,GO:0032324,GO:0032446,GO:0032447,GO:0032505,GO:0032991,GO:0033554,GO:0034227,GO:0034470,GO:0034599,GO:0034641,GO:0034660,GO:0036211,GO:0036267,GO:0040007,GO:0040008,GO:0042221,GO:0042278,GO:0042292,GO:0043170,GO:0043412,GO:0043545,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051186,GO:0051188,GO:0051189,GO:0051301,GO:0051716,GO:0055086,GO:0065007,GO:0070566,GO:0070647,GO:0070733,GO:0070783,GO:0070784,GO:0070887,GO:0071566,GO:0071704,GO:0072521,GO:0090304,GO:0090407,GO:1900428,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:2000220
EggNOG free text desc.thiosulfate sulfurtransferase activity
EggNOG OGsCOG0476@1,KOG2017@2759
EC2.7.7.80,2.8.1.11
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03016,ko04121,ko04131
Exons2
Model size279
Cds size258
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig100308.34.1prot_F-distichus_contig100308.34.1Fucus distichus monoicouspolypeptideF-distichus_contig100308 751..1900 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928923.4981449-UTR-F-distichus_contig100308:729..7501622928923.4981449-UTR-F-distichus_contig100308:729..750Fucus distichus monoicousUTRF-distichus_contig100308 730..750 +
1690885062.2355783-UTR-F-distichus_contig100308:729..7501690885062.2355783-UTR-F-distichus_contig100308:729..750Fucus distichus monoicousUTRF-distichus_contig100308 730..750 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928923.5156326-CDS-F-distichus_contig100308:750..8771622928923.5156326-CDS-F-distichus_contig100308:750..877Fucus distichus monoicousCDSF-distichus_contig100308 751..877 +
1690885062.2662487-CDS-F-distichus_contig100308:750..8771690885062.2662487-CDS-F-distichus_contig100308:750..877Fucus distichus monoicousCDSF-distichus_contig100308 751..877 +
1622928923.5351923-CDS-F-distichus_contig100308:1769..19001622928923.5351923-CDS-F-distichus_contig100308:1769..1900Fucus distichus monoicousCDSF-distichus_contig100308 1770..1900 +
1690885062.275803-CDS-F-distichus_contig100308:1769..19001690885062.275803-CDS-F-distichus_contig100308:1769..1900Fucus distichus monoicousCDSF-distichus_contig100308 1770..1900 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig100308.34.1

>prot_F-distichus_contig100308.34.1 ID=prot_F-distichus_contig100308.34.1|Name=mRNA_F-distichus_contig100308.34.1|organism=Fucus distichus monoicous|type=polypeptide|length=86bp
MEGQLSVLHFQGGPCYRCIFPAPLAAEAGRRCSDNGVLGTVPGVIGCLQA
TEALKVLGEFGEPLSGMLCTFDAQDGSFYTIRLRPR
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mRNA from alignment at F-distichus_contig100308:730..1900+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig100308.34.1 ID=mRNA_F-distichus_contig100308.34.1|Name=mRNA_F-distichus_contig100308.34.1|organism=Fucus distichus monoicous|type=mRNA|length=1171bp|location=Sequence derived from alignment at F-distichus_contig100308:730..1900+ (Fucus distichus monoicous)
GTCTTCGGCAGCGCCCTGGGCATGGAAGGACAGCTGTCGGTCCTCCACTT
TCAAGGGGGACCGTGCTACCGATGCATCTTCCCGGCGCCCCTTGCTGCCG
AGGCCGGCAGGAGGTGCAGCGATAATGGCGTCCTCGGTACTGTCCCCGGT
AAGACATGCTCAGATGTCTTTGTTTTTGAAAGACAGAAAAGAGGCTGTCA
AAGTTATTTCAATAAGAGGCTAAATTTTTTAATACGATCTGATTTATCTA
ACGTAGTGCTTCGTATACATATATGCATATATATATATATATTAATTACT
AGGGTATTGCTTATTTTATTCATATTGGGAGAGGAGGGTTATGTTTGTCT
CACGAATGACATCAATACAGTATCAACAATGAACCCGGTACTGTACTGTC
AACATATTAGCATTTATACAGTACAGTCAGCATACACCTATACTTTTTTT
CTTTTTCTTTTTTCTAGTAAAGAAATCCAAGACTTCGTTATATGTTTACT
ATGTATAGCATAGACACGTTGGGAGAAGAAGTATTACAAGTATGTCCAAT
ATGTTCACGTGACAGCCTTCAAGTGAAGTATTACAAGCCATGCAAACAAT
TAACTTTTCTCGCCCCAAACCAGTCATGGCTTAGATTACAACCGCCAATC
GTGCAGTGCGCAGCTGCCTTGTCCTTACACTATATATATATATATATATT
GTATTGAATATATATTGCAACAAGGCAGGGTAATGTCCACAACGAAATAA
ATGGTCTGTTCGACGTGAAAGAAAAAATGGGTTTTTATCGCCGTCGCCTC
TTCTTCGTTTTTCTGCCGCACGATCTCTCTCTCTCTATATATATATAATA
ATTATATTATATATTTGTTTAAGAAATATATATTCATACGGTGTCTCCTG
TACTTTGTCTATTTAATGCAGCCACGGCCTCGAAGGCGGAAATGGCGAGG
AATCTCTCCTCTACCTAACATATTCTTCTGCGTTGACATTTACACACTGT
TTTGCGTCATACTCTTATGCTTGTGAACCTTTCTTTCCAGGAGTGATCGG
CTGCCTCCAGGCTACGGAGGCCCTCAAGGTTCTGGGAGAGTTCGGCGAAC
CACTTTCGGGCATGCTGTGCACCTTCGACGCTCAAGACGGCTCCTTCTAT
ACCATCCGCCTCCGCCCCAGG
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Coding sequence (CDS) from alignment at F-distichus_contig100308:730..1900+

>mRNA_F-distichus_contig100308.34.1 ID=mRNA_F-distichus_contig100308.34.1|Name=mRNA_F-distichus_contig100308.34.1|organism=Fucus distichus monoicous|type=CDS|length=516bp|location=Sequence derived from alignment at F-distichus_contig100308:730..1900+ (Fucus distichus monoicous)
ATGGAAGGACAGCTGTCGGTCCTCCACTTTCAAGGGGGACCGTGCTACCG
ATGCATCTTCCCGGCGCCCCTTGCTGCCGAGGCCGGCAGGAGGTGCAGCG
ATAATGGCGTCCTCGGTACTGTCCCCGATGGAAGGACAGCTGTCGGTCCT
CCACTTTCAAGGGGGACCGTGCTACCGATGCATCTTCCCGGCGCCCCTTG
CTGCCGAGGCCGGCAGGAGGTGCAGCGATAATGGCGTCCTCGGTACTGTC
CCCGGAGTGATCGGCTGCCTCCAGGCTACGGAGGCCCTCAAGGTTCTGGG
AGAGTTCGGCGAACCACTTTCGGGCATGCTGTGCACCTTCGACGCTCAAG
ACGGCTCCTTCTATACCATCCGCCTCCGCCCCAGGGAGTGATCGGCTGCC
TCCAGGCTACGGAGGCCCTCAAGGTTCTGGGAGAGTTCGGCGAACCACTT
TCGGGCATGCTGTGCACCTTCGACGCTCAAGACGGCTCCTTCTATACCAT
CCGCCTCCGCCCCAGG
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