Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FZZ7 |
| ProteomeId | EsuBft499_18 |
| Protein domains | IPR011990 |
| Protein domains | PTHR19959 |
| Protein domains | IPR019734 |
| Protein domains | IPR013105 |
| Protein domains | SSF48452 |
| Protein domains | PF13424 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | kinesin light chain os:strongylocentrotus purpuratus pe:2 sv:1 [Automatic annotation] |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1416 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.23e-16 |
| EggNOG OGs | COG0457@1|root,KOG1840@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG ko | ko:K10407 |
| KEGG Pathway | ko05132,map05132 |
| Description | determination of stomach left/right asymmetry |
| COG category | C |
| BRITE | ko00000,ko00001,ko03019,ko04812 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0031227 |
| GO | 0007017 |
| GO | 0000003 |
| GO | 0044707 |
| GO | 0005737 |
| GO | 1902578 |
| GO | 0051649 |
| GO | 0016043 |
| GO | 0042995 |
| GO | 0044767 |
| GO | 0005875 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft499_18a-0001 ID=EsuBft499_18a-0001|Name=EsuBft499_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1416bp|location=Sequence derived from alignment at Scaffold_30:149616..151627- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCTCTCGCTGGCCGAGAGGGTCTTCGTCGACAAACTTGGAGCGACGGA
TGCGAGCAACGTGCTACGCGGCGCGGCTAACCTACCGCGCGACGGAGACT
TGTGTGACGACGCCTTGAAAGTGCTGGAGACCTATGGGGGGGTGGCGATG
GACATTGCGTTTGTGGGGAGCTGGAGCTCTGTGCGTACTCCTGACAGCTG
CGCACCAAAGAGCAGCTGGGCGTGGACACGTGCCGTGGAAGAAATCGAGG
CCCAGGGTGGAGGGGTTGGCGTTGATAGAGACGCCAACAGACTTGCAATT
CTGCGCGCGGGCTTCATGTACCTAGCGAGGGACTACCCTTTGGCCCAGGA
GCTGTACGATAAGCTCGCGGCGTTCCCCGATCGCCATTCCTTCAGGAGTC
AGACGCAGCTGCGCTTCTGGACGACCAAGAGGGTCGACGCGTACGCGATG
TTTAACATGCGGAAGACTTCGGAGGAGGCGGGGGGTGAGGGGTGGTGGGT
TTATCGACCGCACGACGAGCAGCTTATACCGATGGAGGCTTCGGATGCAT
CGCAGGTTCATGCTGTTCATGTTCTCGCCGAATTATGCTGTCACGGCGAA
AAACTCGGCGAACTAGAGGCAATCATGCGGAAGCTACTTGAACACTACGA
TGCCCACGGGGGAGGCTGCCCAGAGGTGGAGATGATAGCTCTCTATATTA
TACCGGAAATGCTCTTGGTTGGCTGGGACGCCATTCCGAGCGGGAAGCAG
CTGAGTGCCGTTGAGGTGGGCGGTGGTCTTGCGACAAGCTTTCAGGGCGG
CTTCGCAAAGGTTGAACTAGGCGAGTGTGCACAGAAGGCGGGCCGGCTGG
GGGACGCGGAAGCCTGGTTTAGGCAAGCGCTGAAGATCCAGGAGGCCAAT
TTGGGGGGCGATAAAGTCCAGGAGGGGAGAAAAATTGTGGAGGCGGAGGT
GTTTTTTCGGCGAGCGTTGAAGATCAAGGAGACCACGCTGGGGCCCGACG
GCTTCGCCGTTGCCGTGGTGCTGTACGAGCTGGTTCTGTGTGTGCGTGAG
GCGGGGAAGTTTGCGGAGACGGAGGCGTTGTTGAGGCGAGCTGTGCACAT
CTGTGTGTACAAGCTGAGGGCTGACGACCTGCAGGTTTCCGTAGTGCTGC
ACGGGCTGGGTCCGTGTCTGCGTGAGGCGGGGAAGTTTACGGAGGCGGAG
GCGTTGTTTAGGCGAGGGCTGGAGATTCGCGAGGCCACGCTGGGGCCCGG
CGATCGTATGTTGGTCGTGACGCTGAACGAGCTGGGTGGGTGCCTGCGTA
AGGCGGGGGAATCGGCGGGGGTGGAGGCTTTTCTTAGGCGAGTGCTGAAG
ATCAAGGAGGCCAAGCTGGGGCCCGAAGACGTCCGAGTTGGTTCCACGCT
GCAACACAGGCGGTGA back to topprotein sequence of EsuBft499_18a-0001 >EsuBft499_18 ID=EsuBft499_18|Name=EsuBft499_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=471bp
MLSLAERVFVDKLGATDASNVLRGAANLPRDGDLCDDALKVLETYGGVAM
DIAFVGSWSSVRTPDSCAPKSSWAWTRAVEEIEAQGGGVGVDRDANRLAI
LRAGFMYLARDYPLAQELYDKLAAFPDRHSFRSQTQLRFWTTKRVDAYAM
FNMRKTSEEAGGEGWWVYRPHDEQLIPMEASDASQVHAVHVLAELCCHGE
KLGELEAIMRKLLEHYDAHGGGCPEVEMIALYIIPEMLLVGWDAIPSGKQ
LSAVEVGGGLATSFQGGFAKVELGECAQKAGRLGDAEAWFRQALKIQEAN
LGGDKVQEGRKIVEAEVFFRRALKIKETTLGPDGFAVAVVLYELVLCVRE
AGKFAETEALLRRAVHICVYKLRADDLQVSVVLHGLGPCLREAGKFTEAE
ALFRRGLEIREATLGPGDRMLVVTLNELGGCLRKAGESAGVEAFLRRVLK
IKEAKLGPEDVRVGSTLQHRR back to topmRNA from alignment at Scaffold_30:149616..151627- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft499_18a-0001 ID=EsuBft499_18a-0001|Name=EsuBft499_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2012bp|location=Sequence derived from alignment at Scaffold_30:149616..151627- (Ectocarpus subulatus male Bft15b)
ATGCTCTCGCTGGCCGAGAGGGTCAGTAAGTTGATAAAGTCGTCCGTTCT
CCGGAGACGGGGGAGGCCGGGGAGGGCTATGTGAAGACGATAGTGGAACT
AACGACGAAGCAGTGCCTTGAAGTGGCCGATGATGTGTGGGAGGAAGAAG
TGGTCGAGAAGCTGGGAGAAACGGTTATGTGGGTGCTCCTTACAACCAGG
TTCCCCGAGTTGGTCGAATCTTGTGACAGGTCTTCGTCGACAAACTTGGA
GCGACGGATGCGAGCAACGTGCTACGCGGCGCGGCTAACCTACCGCGCGA
CGGAGACTTGTGTGACGACGCCTTGAAAGTGCTGGAGACCTATGGGGGGG
TGGCGATGGACATTGCGTTTGTGGGGAGCTGGAGCTCTGTGCGTACTCCT
GACAGCTGCGCACCAAAGAGCAGCTGGGCGTGGACACGTGCCGTGGAAGA
AATCGAGGCCCAGGGTGGAGGGGTTGGCGTTGATAGAGACGCCAACAGAC
TTGCAATTCTGCGCGCGGGCTTCATGTACCTAGCGAGGGACTACCCTTTG
GCCCAGGAGCTGTACGATAAGCTCGCGGCGTTCCCCGATCGCCATTCCTT
CAGGAGTCAGACGCAGCTGCGCTTCTGGACGACCAAGAGGTAGTAGCGGG
ACCGATCGATCTTTCAGGGGTGGGGTGTTCTCAGAGCGCATGTATCAAAC
CAGTACCGCATGCACGACGCCCACGTGGGATTCGCGAGGGACGAGCTTAA
CGCTTGGGGTAGAATGCGCAAGGAAGCCGTGGAAAGGTGGACGTCCCGTG
TCTCTCGTTTGGACTTAGCGGTCAGGGTCGACGCGTACGCGATGTTTAAC
ATGCGGAAGACTTCGGAGGAGGCGGGGGGTGAGGGGTGGTGGGTTTATCG
ACCGCACGACGAGCAGCTTATACCGATGGAGGCTTCGGATGCATCGCAGG
TTCATGCTGTTCATGTTCTCGCCGAATTATGCTGTCACGGCGAAAAACTC
GGCGAACTAGAGGCAATCATGCGGAAGCTACTTGAACACTACGATGCCCA
CGGGGGAGGCTGCCCAGAGGTGGAGATGATAGCTCTCTATATTATACCGG
AAATGCTCTTGGTTGGCTGGGACGCCATTCCGAGCGGGAAGCAGCTGAGT
GCCGTTGAGGTGAGTTGGGCGCTACTGGCTTGCAGCTTACGCGGCCCATC
GACGGCACTGGTTCCATGCAAATGTCTACGACCTTCTGTATATACGGAGT
TTGTGCGAGAGCAGCCGGAAACCTGGATGACGCCGAGGACTGGTTTCAAA
CAGCTTTGAAGGCTCAGGTGGGCGGTGGTCTTGCGACAAGCTTTCAGGGC
GGCTTCGCAAAGGTTGAACTAGGCGAGTGTGCACAGAAGGCGGGCCGGCT
GGGGGACGCGGAAGCCTGGTTTAGGCAAGCGCTGAAGATCCAGGAGGCCA
ATTTGGGGGGCGATAAAGTCCAGGTTGCCTGTAGACTATGCTGAAAGACC
TGGGTCTGTGTTTGAAGGAGGGGAGAAAAATTGTGGAGGCGGAGGTGTTT
TTTCGGCGAGCGTTGAAGATCAAGGAGACCACGCTGGGGCCCGACGGCTT
CGCCGTTGCCGTGGTGCTGTACGAGCTGGTTCTGTGTGTGCGTGAGGCGG
GGAAGTTTGCGGAGACGGAGGCGTTGTTGAGGCGAGCTGTGCACATCTGT
GTGTACAAGCTGAGGGCTGACGACCTGCAGGTTTCCGTAGTGCTGCACGG
GCTGGGTCCGTGTCTGCGTGAGGCGGGGAAGTTTACGGAGGCGGAGGCGT
TGTTTAGGCGAGGGCTGGAGATTCGCGAGGCCACGCTGGGGCCCGGCGAT
CGTATGTTGGTCGTGACGCTGAACGAGCTGGGTGGGTGCCTGCGTAAGGC
GGGGGAATCGGCGGGGGTGGAGGCTTTTCTTAGGCGAGTGCTGAAGATCA
AGGAGGCCAAGCTGGGGCCCGAAGACGTCCGAGTTGGTTCCACGCTGCAA
CACAGGCGGTGA back to topCoding sequence (CDS) from alignment at Scaffold_30:149616..151627- >EsuBft499_18a-0001 ID=EsuBft499_18a-0001|Name=EsuBft499_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1416bp|location=Sequence derived from alignment at Scaffold_30:149616..151627- (Ectocarpus subulatus male Bft15b)
ATGCTCTCGCTGGCCGAGAGGGTCTTCGTCGACAAACTTGGAGCGACGGA
TGCGAGCAACGTGCTACGCGGCGCGGCTAACCTACCGCGCGACGGAGACT
TGTGTGACGACGCCTTGAAAGTGCTGGAGACCTATGGGGGGGTGGCGATG
GACATTGCGTTTGTGGGGAGCTGGAGCTCTGTGCGTACTCCTGACAGCTG
CGCACCAAAGAGCAGCTGGGCGTGGACACGTGCCGTGGAAGAAATCGAGG
CCCAGGGTGGAGGGGTTGGCGTTGATAGAGACGCCAACAGACTTGCAATT
CTGCGCGCGGGCTTCATGTACCTAGCGAGGGACTACCCTTTGGCCCAGGA
GCTGTACGATAAGCTCGCGGCGTTCCCCGATCGCCATTCCTTCAGGAGTC
AGACGCAGCTGCGCTTCTGGACGACCAAGAGGGTCGACGCGTACGCGATG
TTTAACATGCGGAAGACTTCGGAGGAGGCGGGGGGTGAGGGGTGGTGGGT
TTATCGACCGCACGACGAGCAGCTTATACCGATGGAGGCTTCGGATGCAT
CGCAGGTTCATGCTGTTCATGTTCTCGCCGAATTATGCTGTCACGGCGAA
AAACTCGGCGAACTAGAGGCAATCATGCGGAAGCTACTTGAACACTACGA
TGCCCACGGGGGAGGCTGCCCAGAGGTGGAGATGATAGCTCTCTATATTA
TACCGGAAATGCTCTTGGTTGGCTGGGACGCCATTCCGAGCGGGAAGCAG
CTGAGTGCCGTTGAGGTGGGCGGTGGTCTTGCGACAAGCTTTCAGGGCGG
CTTCGCAAAGGTTGAACTAGGCGAGTGTGCACAGAAGGCGGGCCGGCTGG
GGGACGCGGAAGCCTGGTTTAGGCAAGCGCTGAAGATCCAGGAGGCCAAT
TTGGGGGGCGATAAAGTCCAGGAGGGGAGAAAAATTGTGGAGGCGGAGGT
GTTTTTTCGGCGAGCGTTGAAGATCAAGGAGACCACGCTGGGGCCCGACG
GCTTCGCCGTTGCCGTGGTGCTGTACGAGCTGGTTCTGTGTGTGCGTGAG
GCGGGGAAGTTTGCGGAGACGGAGGCGTTGTTGAGGCGAGCTGTGCACAT
CTGTGTGTACAAGCTGAGGGCTGACGACCTGCAGGTTTCCGTAGTGCTGC
ACGGGCTGGGTCCGTGTCTGCGTGAGGCGGGGAAGTTTACGGAGGCGGAG
GCGTTGTTTAGGCGAGGGCTGGAGATTCGCGAGGCCACGCTGGGGCCCGG
CGATCGTATGTTGGTCGTGACGCTGAACGAGCTGGGTGGGTGCCTGCGTA
AGGCGGGGGAATCGGCGGGGGTGGAGGCTTTTCTTAGGCGAGTGCTGAAG
ATCAAGGAGGCCAAGCTGGGGCCCGAAGACGTCCGAGTTGGTTCCACGCT
GCAACACAGGCGGTGA back to top
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