Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2522_2 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 117 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2522_2a-0001 ID=EsuBft2522_2a-0001|Name=EsuBft2522_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1172bp|location=Sequence derived from alignment at Scaffold_30:33174..34345+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GCTGCGAGGAAACCATCGAGGCCACCGTGCGCAAACGGAGACGTGTTTCG
CGGGCTTTGTTATGCGCATGGACGACAGCCGCCTCCCCAAGCGCAAGCTG
TTAGGAGCGATGGCGGGGGGCGTGGGATACCGGGGTGGGCAGGAGAGCAA
CTGGGTGTCTCGTCTAGGAGAGGACTTCGTGGCCTTCAACATGGGAGACG
AAAAAGGAGGGGGGAAATGGAAAGAGAGCGCCAAGGACCCGGAGGTGTGG
TACAAGAAGGTCGAGGACGGGGCGGCATGGTTCATGAGGAACTGGCACAT
GCAGGAGGCGGAAGCGTCCGCGAAGCGCCAGCGCGCGAGGGAAGCAGAAG
CAGAGAGTATGGCCATCTCAGGACCGAAGAGAAAGAGAGACGGAGAAGCG
GCGGTGGGGGGGAAGAAACGGCGACCGGGCACTGCTGTAGAAGCGAGTAG
GGCCGCCGAGGGAGCACTTGTGGCGAACTATGTACCCGGCTGATGTTGTT
GCGCCCTGTTTCCTTCCCTGCTGATGCTTATAAGGAATATATGATTCCTC
GGGGTAACTTGCCATCGGGAGAAGTGGCGAGTAAGGCACCGAGGAGATTC
CTCCTTTATGTACGTATGTCCGTTGTATTGCCTTCGGCCTCTGTGCTGTT
TCTTTTTTTCATGACCTCCCTGCCTACTTTGCTGTGTTGGGTACCTTGAT
CTCGCTTTGCTGTTGCCTTTGTTTTTGTACGTCTGGCTGTCTGCCCATCT
GCCGCCTCTTTGTCCTGTTTGCTCTGTTTCTCCTGTTCGTGAGCCCTAGC
CCTGTTAAGGGCCGGCGGACTTGGGGCTGCTGTTTAACTGTGTGTATTAG
CTCGCATGAGAGAGGAGAGAGGGAGAAGGAGGAGAGGCCCCAATTCTCGA
GAGAACACGGGGACTCCGCACTATCATCCAAAGCCTCTCAGCACATACCC
TTCAAGTTGTCCCAGCTGCGTCCTACGTAACGGCTACTTTTCAACTATCT
ACTTCTACGCACGAACACCCTCCCTGGTTCTTTACGCCAGTGAAGAACCT
CTAGTGCGTCGAAAATACGTTTGAAAAACCTTAACACAACGACAAACCAA
AAGTAAAGGGGAAACCCGGCCACCGGATTAAAACCCCTCAGAAATTCAAC
GCCTCACGCCGATCATATCACG back to topprotein sequence of EsuBft2522_2a-0001 >EsuBft2522_2 ID=EsuBft2522_2|Name=EsuBft2522_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=143bp
MRMDDSRLPKRKLLGAMAGGVGYRGGQESNWVSRLGEDFVAFNMGDEKGG
GKWKESAKDPEVWYKKVEDGAAWFMRNWHMQEAEASAKRQRAREAEAESM
AISGPKRKRDGEAAVGGKKRRPGTAVEASRAAEGALVANYVPG back to topmRNA from alignment at Scaffold_30:33174..34345+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2522_2a-0001 ID=EsuBft2522_2a-0001|Name=EsuBft2522_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1172bp|location=Sequence derived from alignment at Scaffold_30:33174..34345+ (Ectocarpus subulatus male Bft15b)
GCTGCGAGGAAACCATCGAGGCCACCGTGCGCAAACGGAGACGTGTTTCG
CGGGCTTTGTTATGCGCATGGACGACAGCCGCCTCCCCAAGCGCAAGCTG
TTAGGAGCGATGGCGGGGGGCGTGGGATACCGGGGTGGGCAGGAGAGCAA
CTGGGTGTCTCGTCTAGGAGAGGACTTCGTGGCCTTCAACATGGGAGACG
AAAAAGGAGGGGGGAAATGGAAAGAGAGCGCCAAGGACCCGGAGGTGTGG
TACAAGAAGGTCGAGGACGGGGCGGCATGGTTCATGAGGAACTGGCACAT
GCAGGAGGCGGAAGCGTCCGCGAAGCGCCAGCGCGCGAGGGAAGCAGAAG
CAGAGAGTATGGCCATCTCAGGACCGAAGAGAAAGAGAGACGGAGAAGCG
GCGGTGGGGGGGAAGAAACGGCGACCGGGCACTGCTGTAGAAGCGAGTAG
GGCCGCCGAGGGAGCACTTGTGGCGAACTATGTACCCGGCTGATGTTGTT
GCGCCCTGTTTCCTTCCCTGCTGATGCTTATAAGGAATATATGATTCCTC
GGGGTAACTTGCCATCGGGAGAAGTGGCGAGTAAGGCACCGAGGAGATTC
CTCCTTTATGTACGTATGTCCGTTGTATTGCCTTCGGCCTCTGTGCTGTT
TCTTTTTTTCATGACCTCCCTGCCTACTTTGCTGTGTTGGGTACCTTGAT
CTCGCTTTGCTGTTGCCTTTGTTTTTGTACGTCTGGCTGTCTGCCCATCT
GCCGCCTCTTTGTCCTGTTTGCTCTGTTTCTCCTGTTCGTGAGCCCTAGC
CCTGTTAAGGGCCGGCGGACTTGGGGCTGCTGTTTAACTGTGTGTATTAG
CTCGCATGAGAGAGGAGAGAGGGAGAAGGAGGAGAGGCCCCAATTCTCGA
GAGAACACGGGGACTCCGCACTATCATCCAAAGCCTCTCAGCACATACCC
TTCAAGTTGTCCCAGCTGCGTCCTACGTAACGGCTACTTTTCAACTATCT
ACTTCTACGCACGAACACCCTCCCTGGTTCTTTACGCCAGTGAAGAACCT
CTAGTGCGTCGAAAATACGTTTGAAAAACCTTAACACAACGACAAACCAA
AAGTAAAGGGGAAACCCGGCCACCGGATTAAAACCCCTCAGAAATTCAAC
GCCTCACGCCGATCATATCACG back to topCoding sequence (CDS) from alignment at Scaffold_30:33174..34345+ >EsuBft2522_2a-0001 ID=EsuBft2522_2a-0001|Name=EsuBft2522_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=432bp|location=Sequence derived from alignment at Scaffold_30:33174..34345+ (Ectocarpus subulatus male Bft15b)
ATGCGCATGGACGACAGCCGCCTCCCCAAGCGCAAGCTGTTAGGAGCGAT
GGCGGGGGGCGTGGGATACCGGGGTGGGCAGGAGAGCAACTGGGTGTCTC
GTCTAGGAGAGGACTTCGTGGCCTTCAACATGGGAGACGAAAAAGGAGGG
GGGAAATGGAAAGAGAGCGCCAAGGACCCGGAGGTGTGGTACAAGAAGGT
CGAGGACGGGGCGGCATGGTTCATGAGGAACTGGCACATGCAGGAGGCGG
AAGCGTCCGCGAAGCGCCAGCGCGCGAGGGAAGCAGAAGCAGAGAGTATG
GCCATCTCAGGACCGAAGAGAAAGAGAGACGGAGAAGCGGCGGTGGGGGG
GAAGAAACGGCGACCGGGCACTGCTGTAGAAGCGAGTAGGGCCGCCGAGG
GAGCACTTGTGGCGAACTATGTACCCGGCTGA back to top
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