Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2522_5 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 277 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2522_5a-0001 ID=EsuBft2522_5a-0001|Name=EsuBft2522_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2777bp|location=Sequence derived from alignment at Scaffold_30:5911..9151- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTACGACGATGTCAAAGACCGTATTCTGTTCCACCCCATGCTTTCGAG
AGGTACTCTGGAAGAGACGCTGAGGCTGGCCGAGCACGAGCAGAGGATCA
AACGGAGGTCTGGAGAGGGGATCGAGGACACGAGGCATGCGCCCGTCGCT
GCCGGTGTGGGCCGGGGCGGCGGCATGAGGACAGCAGCTGCTGCGGGAGC
GGATGGCGGGCGATCTCATGAGCAGAGAGGTGCCTTCTTCTGTCAGGTTC
ACGGAGCGAACTCCTCTCACAACACCCCGGACTGCCATAAACTTCGCCAG
GACTTCTTGTTCCACTACAACGACTTCATGGCGTTCATTCGCGAGAGGGA
CAGTATGCGGGGACCAGGGCCCGACGCTTGCCAGCCGCGAGTCTTCAACG
AGGCCTTCCGCACCCCTAATCTGCCGGCGACACCGCAACAGCAACAGCAG
CAGCAGCAGCAGCAGACATCAGCGCACCCTCAACGACCTCTGCCTCCTCG
ACGGCGATCCCCTCTTCACCTCCGGGCGACATTCCTCCAGTTAGTGGCGC
CCGTCTTCGTCTCTTCCACACAAATACTTCGAAGTAGTGTGGAACCTCTA
GGCGAGTCTGATTCTCTGACTGGAAATGAGATTGGAGTTGTTAGTGATGG
GGAGTTGTCTGGTGTTCCCGTTGCTGGTATGTCTGTGCTTGATGTTCCTG
TTGTTCCTGTAGTGAATCCTGCTGTAACCTCTCAAGCTCCGGTATCCCAC
ACTAGGATGCCAACACCCAAAGGTGGTGAGCAGTTGCAGGGAGACTCGGG
GACGAGTGCGGGGATATTTCATGCGAGGGAAGGAGTTGCGTTTGAGTATG
ATGTGGCTGTGTTGGGTCGTGCCGAACAAATGGATGTTGACGTTTTCCAC
CACCGCGCTGGCCACTTTCCCGAACCCATTTTGAGTATGACTGCCGAGCA
ACAAGGGAACACCCTTCCCAGGGAGTTGGAACCCGGGAACACTGCCGCTT
CGCCGCCCTCTGCCAACGCTGCCACTTGGCCTGCCGTCGCCGCCGCCACG
GCGGGGACCATCACCGCTTCGCCGCCCGCTGCTGCCGCTGTACCGTGGGG
ACCCGCCACTGCCGACGCTACGTCATCGTCGCCGTCGCACACCGCTGGTG
GCGCACCATGGAATGCAGCCGCCGCCACCGACGCACCGTCGCCGCTGCCG
CCAACCTCCGGGACCGCGTTACCCGCCACTGTCACCGCGGCCGCGCCGTC
GCCGCGGCCGCCGACCTCCGGGGCGCCGTGCCGCTTGTGCCTTCGCCAGG
TGCCACCGCGCTGCCGCGCCCGAGGACGACCGCGACGAGGACCACCGACG
GCGCCGCCGCCGCTTCGTCATCGCCGCAGCATACCACCGCAGGTGGGACC
CGAATTCATCCAGCCGCCCCTGTCGTCCCCGCGTCGTCGCCGACATTACC
TTACTCAGGGCATGCTTCGCCACAGGCGGACTAGTTGTCTTCTATTGAGG
CCGCTGCTTCATTTTCGACGGCGCGTGATGCACGGCAAGCCGATGGTTAG
GCATGGGTTGGTGGGGGCCGGTGAGCTGGGGGGCGGCGAGCAGGGGGGCG
ATGGAGGACAATACGGTTGGGGGGGAGACGTGAAGGCGATCAAGAGCAAA
TAGGTGGGGGTCGATACCGGTGGAAATGATGAGTGGAGAATGAGTGGTCG
GTCGACCCCGCGTGGCACGGCTTGTATCGCCGGGTCTGCTCTTTGTCATG
TGCGGTTCGTGTTTCGTTTTGTTTTTGTTTGCCTTTCTTTCTAGCAGCGA
GATTTCTTCTTTCAATTGTTGCTGTTCTTAAATCTAAAATCATGGGGGGG
GTGTCATGTGTGACCATGATTCGAGATGGCATGAACAGCAATCGAGTTGT
TTCTGTTTTCATATGAATACCTGCTTAGCAAACGGACTGTTGACGTATTG
ATAATAACGGAGTGTTCTTTCATGGACTCTGGAAATATCAGAGGTGTGTT
TTGGGATGTGACAGAAGAGAGGCTGGTTGCATGGTTGTTTGATTTTCTAC
CATTGAACAGCAACGGTGACACCGGTTTGCTTGTACGCGCTGCGTAGTAA
TTGGTCCTTGGAAACTGTAGTGGAGGAATAATTTGGCATGTTTTGATTGA
TGAGTACGTGTTGAATTGTCTTCGTGTGGCATTTTACTTGGTAGAAGGCT
TTACGTTATCTCCTGTGTATTTGACGCGCCTTTCCATGTACCATCGGTCA
GGGATACACCCGTTCTCTCTGTTTTCGATGCTGTCGGCAATTATCATGGG
GAGGGAGAATAGGTTGTGTCATGACAATTGCCACAGCATCACGAACAAAT
GAATGCTTTGTTTTTTTTTACTCTGCCCGATTTGCAAAGTTCATGATTTG
ATTGCGTGAATGGCAATGCAAGTTTTTATGCGGTTATATTTGGTGTGCTT
TCCGTACTCAAATGTCACAGGATGCGTTTGTCAAGTAGAGGGTTGATCCC
TTGCCGTCTGGTGTCCGGAGCAGGGGGGCCGTAATCAGACTGCATTGGTA
GGGTTTGCAGGAAGGAAATCTATTGCTCTGTTGTCGAAGGATAGATGTTA
NGTAGAGGGTTAATCGCTTAACGTCTGGTGTTCGGAGTAGGGGGGGCGTA
GCCAGACACGTATTTGTAGGGTATGCAGGAAGGAAAATTGTTGTTCTGTT
GGAAATTGAAGAGATGTTATTCACAGAATGTGGCGTCTTGCAGCAGCGGA
GGTGGCGGCGCGCTTGTGTCTCATCTC back to topprotein sequence of EsuBft2522_5a-0001 >EsuBft2522_5 ID=EsuBft2522_5|Name=EsuBft2522_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=550bp
MYDDVKDRILFHPMLSRGTLEETLRLAEHEQRIKRRSGEGIEDTRHAPVA
AGVGRGGGMRTAAAAGADGGRSHEQRGAFFCQVHGANSSHNTPDCHKLRQ
DFLFHYNDFMAFIRERDSMRGPGPDACQPRVFNEAFRTPNLPATPQQQQQ
QQQQQTSAHPQRPLPPRRRSPLHLRATFLQLVAPVFVSSTQILRSSVEPL
GESDSLTGNEIGVVSDGELSGVPVAGMSVLDVPVVPVVNPAVTSQAPVSH
TRMPTPKGGEQLQGDSGTSAGIFHAREGVAFEYDVAVLGRAEQMDVDVFH
HRAGHFPEPILSMTAEQQGNTLPRELEPGNTAASPPSANAATWPAVAAAT
AGTITASPPAAAAVPWGPATADATSSSPSHTAGGAPWNAAAATDAPSPLP
PTSGTALPATVTAAAPSPRPPTSGAPCRLCLRQVPPRCRARGRPRRGPPT
APPPLRHRRSIPPQVGPEFIQPPLSSPRRRRHYLTQGMLRHRRTSCLLLR
PLLHFRRRVMHGKPMVRHGLVGAGELGGGEQGGDGGQYGWGGDVKAIKSK back to topmRNA from alignment at Scaffold_30:5911..9151- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2522_5a-0001 ID=EsuBft2522_5a-0001|Name=EsuBft2522_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3241bp|location=Sequence derived from alignment at Scaffold_30:5911..9151- (Ectocarpus subulatus male Bft15b)
ATGTACGACGATGTCAAAGACCGTATTCTGTTCCACCCCATGCTTTCGAG
AGGTACTCTGGAAGAGACGCTGAGGCTGGCCGAGCACGAGCAGAGGATCA
AACGGAGGTCTGGAGAGGGGATCGAGGACACGAGGCATGCGCCCGTCGCT
GCCGGTGTGGGCCGGGGCGGCGGCATGAGGACAGCAGCTGCTGCGGGAGC
GGATGGCGGGCGATCTCATGAGCAGAGAGGTGCCTTCTTCTGTCAGGTTC
ACGGAGCGAACTCCTCTCACAACACCCCGGACTGCCATAAACTTCGCCAG
GACTTCTTGTTCCACTACAACGACTTCATGGCGTTCATTCGCGAGAGGGA
CAGTATGCGGGGACCAGGTTTTTCTCAGGCCCGGGGGCAAGACTCGGGGC
GCTTGTCGGGCGGATCATATCGAGAGCAGCTGCACCAACTGGACCATGGG
GCAAGCTAGGGTCGGGGCCGCCCGTTCTGTCCGACTTGTGCAGGGCCCGA
CGCTTGCCAGCCGCGAGTCTTCAACGAGGCCTTCCGCACCCCTAATCTGC
CGGCGACACCGCAACAGCAACAGCAGCAGCAGCAGCAGCAGACATCAGCG
CACCCTCAACGACCTCTGCCTCCTCGACGGCGATCCCCTCTTCACCTCCG
GGCGACATTCCTCCAGTTAGTGGCGCCCGTCTTCGTCTCTTCCACACAAA
TACTTCGAAGTAGTGTGGAACCTCTAGGCGAGTCTGATTCTCTGACTGGA
AATGAGATTGGAGTTGTTAGTGATGGGGAGTTGTCTGGTGTTCCCGTTGC
TGGTATGTCTGTGCTTGATGTTCCTGTTGTTCCTGTAGTGAATCCTGCTG
TAACCTCTCAAGCTCCGGTATCCCACACTAGGATGCCAACACCCAAAGGT
GGTGAGCAGTTGCAGGGAGACTCGGGGACGAGTGCGGGGATATTTCATGC
GAGGGAAGGAGTTGCGTTTGAGTATGATGTGGCTGTGTTGGGTCGTGCCG
AACAAATGGATGTTGACGTTTTCCACCACCGCGCTGGCCACTTTCCCGAA
CCCATTTTGAGTATGACTGCCGAGCAACAAGGGAACACCCTTCCCAGGGA
GTTGGAACCCGGGAACACTGCCGCTTCGCCGCCCTCTGCCAACGCTGCCA
CTTGGCCTGCCGTCGCCGCCGCCACGGCGGGGACCATCACCGCTTCGCCG
CCCGCTGCTGCCGCTGTACCGTGGGGACCCGCCACTGCCGACGCTACGTC
ATCGTCGCCGTCGCACACCGCTGGTGGCGCACCATGGAATGCAGCCGCCG
CCACCGACGCACCGTCGCCGCTGCCGCCAACCTCCGGGACCGCGTTACCC
GCCACTGTCACCGCGGCCGCGCCGTCGCCGCGGCCGCCGACCTCCGGGGC
GCCGTGCCGCTTGTGCCTTCGCCAGGTGCCACCGCGCTGCCGCGCCCGAG
GACGACCGCGACGAGGACCACCGACGGCGCCGCCGCCGCTTCGTCATCGC
CGCAGCATACCACCGCAGGTGGGACCCGAATTCATCCAGCCGCCCCTGTC
GTCCCCGCGTCGTCGCCGACATTACCTTACTCAGGGCATGCTTCGCCACA
GGCGGACTAGTTGTCTTCTATTGAGGCCGCTGCTTCATTTTCGACGGCGC
GTGATGCACGGCAAGCCGATGGTTAGGCATGGGTTGGTGGGGGCCGGTGA
GCTGGGGGGCGGCGAGCAGGGGGGCGATGGAGGACAATACGGTTGGGGGG
GAGACGTGAAGGCGATCAAGAGCAAATAGGTGGGGGTCGATACCGGTGGA
AATGATGAGTGGAGAATGAGTGGTCGGTCGACCCCGCGTGGCACGGCTTG
TATCGCCGGGTCTGCTCTTTGTCATGTGCGGTTCGTGTTTCGTTTTGTTT
TTGTTTGCCTTTCTTTCTAGCAGCGAGATTTCTTCTTTCAATTGTTGCTG
TTCTTAAATCTAAAATCATGGGGGGGGTGTCATGTGTGACCATGATTCGA
GATGGCATGAACAGCAATCGAGTTGTTTCTGTTTTCATATGAATACCTGC
TTAGCAAACGGACTGTTGACGTATTGATAATAACGGAGTGTTCTTTCATG
GACTCTGGAAATATCAGAGGTGTGTTTTGGGATGTGACAGAAGAGAGGCT
GGTTGCATGGTTGTTTGATTTTCTACCATTGAACAGCAACGGTGACACCG
GTTTGCTTGTACGCGCTGCGTAGTAATTGGTCCTTGGAAACTGTAGTGGA
GGAATAATTTGGCATGTTTTGATTGATGAGTACGTGTTGAATTGTCTTCG
TGTGGCATTTTACTTGGTAGAAGGCTTTACGTTATCTCCTGTGTATTTGA
CGCGCCTTTCCATGTACCATCGGTCAGGGATACACCCGTTCTCTCTGTTT
TCGATGCTGTCGGCAATTATCATGGGGAGGGAGAATAGGTTGTGTCATGA
CAATTGCCACAGCATCACGAACAAATGAATGCTTTGTTTTTTTTTACTCT
GCCCGATTTGCAAAGTTCATGATTTGATTGCGTGAATGGCAATGCAAGTT
TTTATGCGGTTATATTTGGTGTGCTTTCCGTACTCAAATGTCACAGGATG
CGTTTGTCAAGTAGAGGGTTGATCCCTTGCCGTCTGGTGTCCGGAGCAGG
GGGGCCGTAATCAGACTGCATTGGTAGGGTTTGCAGGAAGGAAATCTATT
GCTCTGTTGTCGAAGGATGTACGAAGTGTTTGTCAAGTAGAGGGTTAATC
GCTTAACGTCTGGTGTTCGGAGTAGGGGGGGCGTAGCCAGACACGTATTT
GTAGGGTATGCAGGAAGGAAAATTGTTGTTCTGTTGGAAATTGAAGAGAT
GTTANGTAGAGGGTTAATCGCTTAACGTCTGGTGTTCGGAGTAGGGGGGG
CGTAGCCAGACACGTATTTGTAGGGTATGCAGGAAGGAAAATTGTTGTTC
TGTTGGAAATTGAAGAGATGTTATTCACAGAATGTGGCGTCTTGCAGCAG
CGGAGGTGGCGGTGCCGCTGTAGCTCGTAGACTTTGTAGTCTACCACAGA
GGTTACACTGCTGTCACCGTTCTATCACAGAGAGAGGTTGGTCTACACTG
CTGTGAGATTGGTAGGCCCGAGCGAGCTCTGGAAAGAGAAATGTAGATAG
ATTTTCTGATCAACTGACTCCCTGGTCAGGCTTTGATGGGTGCTAGATGA
GAGTGAGCACAAGGGGCGAAGGCGCGCTTGTGTCTCATCTC back to topCoding sequence (CDS) from alignment at Scaffold_30:5911..9151- >EsuBft2522_5a-0001 ID=EsuBft2522_5a-0001|Name=EsuBft2522_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1653bp|location=Sequence derived from alignment at Scaffold_30:5911..9151- (Ectocarpus subulatus male Bft15b)
ATGTACGACGATGTCAAAGACCGTATTCTGTTCCACCCCATGCTTTCGAG
AGGTACTCTGGAAGAGACGCTGAGGCTGGCCGAGCACGAGCAGAGGATCA
AACGGAGGTCTGGAGAGGGGATCGAGGACACGAGGCATGCGCCCGTCGCT
GCCGGTGTGGGCCGGGGCGGCGGCATGAGGACAGCAGCTGCTGCGGGAGC
GGATGGCGGGCGATCTCATGAGCAGAGAGGTGCCTTCTTCTGTCAGGTTC
ACGGAGCGAACTCCTCTCACAACACCCCGGACTGCCATAAACTTCGCCAG
GACTTCTTGTTCCACTACAACGACTTCATGGCGTTCATTCGCGAGAGGGA
CAGTATGCGGGGACCAGGGCCCGACGCTTGCCAGCCGCGAGTCTTCAACG
AGGCCTTCCGCACCCCTAATCTGCCGGCGACACCGCAACAGCAACAGCAG
CAGCAGCAGCAGCAGACATCAGCGCACCCTCAACGACCTCTGCCTCCTCG
ACGGCGATCCCCTCTTCACCTCCGGGCGACATTCCTCCAGTTAGTGGCGC
CCGTCTTCGTCTCTTCCACACAAATACTTCGAAGTAGTGTGGAACCTCTA
GGCGAGTCTGATTCTCTGACTGGAAATGAGATTGGAGTTGTTAGTGATGG
GGAGTTGTCTGGTGTTCCCGTTGCTGGTATGTCTGTGCTTGATGTTCCTG
TTGTTCCTGTAGTGAATCCTGCTGTAACCTCTCAAGCTCCGGTATCCCAC
ACTAGGATGCCAACACCCAAAGGTGGTGAGCAGTTGCAGGGAGACTCGGG
GACGAGTGCGGGGATATTTCATGCGAGGGAAGGAGTTGCGTTTGAGTATG
ATGTGGCTGTGTTGGGTCGTGCCGAACAAATGGATGTTGACGTTTTCCAC
CACCGCGCTGGCCACTTTCCCGAACCCATTTTGAGTATGACTGCCGAGCA
ACAAGGGAACACCCTTCCCAGGGAGTTGGAACCCGGGAACACTGCCGCTT
CGCCGCCCTCTGCCAACGCTGCCACTTGGCCTGCCGTCGCCGCCGCCACG
GCGGGGACCATCACCGCTTCGCCGCCCGCTGCTGCCGCTGTACCGTGGGG
ACCCGCCACTGCCGACGCTACGTCATCGTCGCCGTCGCACACCGCTGGTG
GCGCACCATGGAATGCAGCCGCCGCCACCGACGCACCGTCGCCGCTGCCG
CCAACCTCCGGGACCGCGTTACCCGCCACTGTCACCGCGGCCGCGCCGTC
GCCGCGGCCGCCGACCTCCGGGGCGCCGTGCCGCTTGTGCCTTCGCCAGG
TGCCACCGCGCTGCCGCGCCCGAGGACGACCGCGACGAGGACCACCGACG
GCGCCGCCGCCGCTTCGTCATCGCCGCAGCATACCACCGCAGGTGGGACC
CGAATTCATCCAGCCGCCCCTGTCGTCCCCGCGTCGTCGCCGACATTACC
TTACTCAGGGCATGCTTCGCCACAGGCGGACTAGTTGTCTTCTATTGAGG
CCGCTGCTTCATTTTCGACGGCGCGTGATGCACGGCAAGCCGATGGTTAG
GCATGGGTTGGTGGGGGCCGGTGAGCTGGGGGGCGGCGAGCAGGGGGGCG
ATGGAGGACAATACGGTTGGGGGGGAGACGTGAAGGCGATCAAGAGCAAA
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