Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1050_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 66 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1050_2a-0001 ID=EsuBft1050_2a-0001|Name=EsuBft1050_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=662bp|location=Sequence derived from alignment at Scaffold_265:76313..77573- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TCTCTCTCTCTCTCTCTGGTACCACGAATGCCTCACCCCGAGCGATGGGC
AATCTAACAGTGTCCTACTCGTTTGATCAGTGCCCTTCCGGTGCCTTTCA
GTAGGCAACACAACAACATTACAAACACGCAGGATCGGATGCGATCCGGC
AAACGCGGCTGAACGCATGTTGCTGAAGATACAAAATGCACATCAACAGC
ACATACATCATGCAACGTCTAGCACTGCCGTCAGCGCTACACACGCAGTT
CACGTCAACAATAATGGACGACATGGACGACGTAGCCGCGTTCTGGCAGC
ACCATGCTGAGGGTTTCTGTCCACAGGGCAACCCGCTCAAAGTTTGGGAA
GAATTACTGCTCATAGCAGCACAAACGCCTGATCGTTTCCGCGAAGCTTT
GCAAGCGGCCGCAGTCGCTGTTGGTGCTCGGTACTGCAACCACGATACTC
CGCCGGGTCCGCTCCCTGATATCAGAAAACTGCCGGAGAGGCAGGCCGCC
GTACAGCAACACGCTGGATTATGCGGAAAGTACCACGCGGAACACATCGC
CAACATCGGCGTCACCATGGTGGAAGAAAGGGCAGCAGGAGCTGAGATCA
CAACGAAAAGAATAAGGAATCAGGTGTGTGTTACGCCGACGGGCGTGTTG
GCGGATCAGTAA back to topprotein sequence of EsuBft1050_2a-0001 >EsuBft1050_2 ID=EsuBft1050_2|Name=EsuBft1050_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=158bp
MHINSTYIMQRLALPSALHTQFTSTIMDDMDDVAAFWQHHAEGFCPQGNP
LKVWEELLLIAAQTPDRFREALQAAAVAVGARYCNHDTPPGPLPDIRKLP
ERQAAVQQHAGLCGKYHAEHIANIGVTMVEERAAGAEITTKRIRNQVCVT
PTGVLADQ back to topmRNA from alignment at Scaffold_265:76313..77573- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1050_2a-0001 ID=EsuBft1050_2a-0001|Name=EsuBft1050_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1261bp|location=Sequence derived from alignment at Scaffold_265:76313..77573- (Ectocarpus subulatus male Bft15b)
TCTCTCTCTCTCTCTCTGGTACCACGAATGCCTCACCCCGAGCGATGGGC
AATCTAACAGTGTCCTACTCGTTTGATCAGTGCCCTTCCGGTGCCTTTCA
GTAGGCAACACAACAACATTACAAACACGCAGGATCGGATGCGATCCGGC
AAACGCGGCTGAACGCATGTTGCTGAAGATACAAAATGCACATCAACAGC
ACATACATCATGCAACGTCTAGCACTGCCGTCAGGTCATAAACGAGCCTT
TGCCGCCATTGAGGACGTAGTCCTATCCCTTGCAAGGGCTGAGGCACAAT
CGCGCGGCGAAAGATCGCGCATGGCCCTCTGCTAAGCACGCCAGAACAGG
TGTCACCCAGTGTAAAAAATCAGTATGGATTTTTTACAAAAGCCACGCGG
GACCGCTATCCATACTAAATTAGACAAGGGTGAGAGATAGATGGAGAGGG
AGAGTGTACTGAAAAAGTCCCGCATGCCTTCAACGCCGATAGCGATGTCG
ATACCCCACGGAGCCCCTCTGGCCAGCGCTACACACGCAGTTCACGTCAA
CAATAATGGACGACATGGACGACGTAGCCGCGTTCTGGCAGCACCATGCT
GAGGGTTTCTGTCCACAGGGCAACCCGCTCAAAGTTTGGGAAGAATTACT
GCTCATAGCAGCACAAACGCCTGATCGTTTCCGCGAAGCTTTGCAAGCGG
CCGCAGTCGCTGTTGGTGCTCGGTACTGCAACCACGATACTCCGCCGGGT
CCGCTCCCTGATATCAGAAAACTGCCGGAGAGGCAGGCCGCCGTACAGCA
ACACGCTGGATTATGCGGAAAGTACCACGCGGAACACATCGCCAACATCG
GCGTCACCATGGTGGAAGAAAGGGCAGCAGGAGCTGAGATCACAACGAAA
AGAATAAGGAATCAGGTGTGTGTGTATTGGACTGCTGGTTGTGGGGTATG
CACTGCTGTGCATGTGTGCCAGGAAATGTGTTCGAGGCCAGAGTGGTGGT
GGGAGTGCCACACGAACGACATCTATCTGTCTGTGGCCTGCTGACACTTT
AGGCCGGAAAGAGAGGCACGTTGTGTTGTTGTGTTGAATACTTCACATAT
ACGACCTGCAGCTGTTGACACAACTTCGACACCGCGAGAGAATCGGTGTT
TTTAGCCTTTGACGTTGTTGGTGTCCTGCTGCTGTCAGCAGGCAAAGAAG
CTTGTGATGAAAGCTTATTTGTGCGGGAAGTACGCCGACGGGCGTGTTGG
CGGATCAGTAA back to topCoding sequence (CDS) from alignment at Scaffold_265:76313..77573- >EsuBft1050_2a-0001 ID=EsuBft1050_2a-0001|Name=EsuBft1050_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=477bp|location=Sequence derived from alignment at Scaffold_265:76313..77573- (Ectocarpus subulatus male Bft15b)
ATGCACATCAACAGCACATACATCATGCAACGTCTAGCACTGCCGTCAGC
GCTACACACGCAGTTCACGTCAACAATAATGGACGACATGGACGACGTAG
CCGCGTTCTGGCAGCACCATGCTGAGGGTTTCTGTCCACAGGGCAACCCG
CTCAAAGTTTGGGAAGAATTACTGCTCATAGCAGCACAAACGCCTGATCG
TTTCCGCGAAGCTTTGCAAGCGGCCGCAGTCGCTGTTGGTGCTCGGTACT
GCAACCACGATACTCCGCCGGGTCCGCTCCCTGATATCAGAAAACTGCCG
GAGAGGCAGGCCGCCGTACAGCAACACGCTGGATTATGCGGAAAGTACCA
CGCGGAACACATCGCCAACATCGGCGTCACCATGGTGGAAGAAAGGGCAG
CAGGAGCTGAGATCACAACGAAAAGAATAAGGAATCAGGTGTGTGTTACG
CCGACGGGCGTGTTGGCGGATCAGTAA back to top
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