Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1631_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 32 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Pseudogene |
| Ec32 ortholog | Ec-10_002290.1 |
| Date last modified | 2016-06-15 |
| Date creation | 2016-06-15 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1631_3a-0001 ID=EsuBft1631_3a-0001|Name=EsuBft1631_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=324bp|location=Sequence derived from alignment at Scaffold_265:30473..31393+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAATGGAATGAACCACCTGTTCGTAAAGGTGGACATCGGCGAGGGGGT
CGAAGCTGTCAACTTCGGCAGTCCGCACGAGCTCTTGAGCGAGTTTTGGC
CACTCCTTCGCTGGGCTGCCTCCTCCTCGGACGAGATCGAAGACGGCCTC
CTGTACCGCTGGATGAAGGACGCCAGCGACTACGGCGCCAGCTTCTCGAA
GAGCAACAAGTTTTTCAAGCTCGTGGCGGGCGAGACTGTTGCAAAGGCAA
GGCCGGTGCGGCGGCGACCGAGGCTGCCAAATCGGTCACCCTGCGCGCCG
AGAAAAGTGCGTGTGTTGTGTTGA back to topprotein sequence of EsuBft1631_3a-0001 >EsuBft1631_3 ID=EsuBft1631_3|Name=EsuBft1631_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=107bp
MNGMNHLFVKVDIGEGVEAVNFGSPHELLSEFWPLLRWAASSSDEIEDGL
LYRWMKDASDYGASFSKSNKFFKLVAGETVAKARPVRRRPRLPNRSPCAP
RKVRVLC back to topmRNA from alignment at Scaffold_265:30473..31393+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1631_3a-0001 ID=EsuBft1631_3a-0001|Name=EsuBft1631_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=921bp|location=Sequence derived from alignment at Scaffold_265:30473..31393+ (Ectocarpus subulatus male Bft15b)
ATGAATGGAATGAACCACCTGTTCGTAAAGGTGGACATCGGCGAGGGGGT
CGAAGCTGTCAACTTCGGCAGTCCGCACGAGCTCTTGAGCGAGTTTTGGC
CACTCCTTCGCTGGGCTGCCTCCTCCTCGGACGAGGTGATTTTTATATAC
TTTTATTTCTATTATTTGATCCCATCTTTTTCGTTTCGCGATATGTACTC
AGTAGTCACCCTCGTTAAGGCACGAAGGTAGAGCCAGCCGCCAGGTTCAC
ATGAAGTGCCGGCCTCTGAGGCCCTTCGAACCTTGTTTTTTCCACGATGC
GGGAAGTCAGTCTCATGGTGAACGGGAGGGAGGGGGGTTCAGCGATCCCC
CCTCCTTTCTTTTTCTTCAGACCGTTGAGGCGGATCTTGTGCGTGTATTA
GCATCGAGCGCGACAACCTGCTGACCAATGAAATGGCACCAGTCTCAGTG
CTGTTGAAAACAGCAAATGCAAAATGCCATGACCTGGGACCCCGTCAAAG
TCTGCGAGTGCAACAGCTCTCCGGGTGGGAGAGTTCGTCGTTAGCTGTGC
TTGATACCTCAGCTCCATTTTTTTTCCCGTTGAAAATATGAAAAATGACT
GCCAAATTTCCTTTGCGATAAAAGTTGTCGTGTTGTACTCTGGTGTTTTC
TGAAGCCACCCCTGCCGCTTTTCATTTCTTTGTGCGCTGACTGCTGCTGC
TGTTGCTGTGTGTGCATGGTTATTTCTTGAAGATCGAAGACGGCCTCCTG
TACCGCTGGATGAAGGACGCCAGCGACTACGGCGCCAGCTTCTCGAAGAG
CAACAAGTTTTTCAAGCTCGTGGCGGGCGAGACTGTTGCAAAGGCAAGGC
CGGTGCGGCGGCGACCGAGGCTGCCAAATCGGTCACCCTGCGCGCCGAGA
AAAGTGCGTGTGTTGTGTTGA back to topCoding sequence (CDS) from alignment at Scaffold_265:30473..31393+ >EsuBft1631_3a-0001 ID=EsuBft1631_3a-0001|Name=EsuBft1631_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=324bp|location=Sequence derived from alignment at Scaffold_265:30473..31393+ (Ectocarpus subulatus male Bft15b)
ATGAATGGAATGAACCACCTGTTCGTAAAGGTGGACATCGGCGAGGGGGT
CGAAGCTGTCAACTTCGGCAGTCCGCACGAGCTCTTGAGCGAGTTTTGGC
CACTCCTTCGCTGGGCTGCCTCCTCCTCGGACGAGATCGAAGACGGCCTC
CTGTACCGCTGGATGAAGGACGCCAGCGACTACGGCGCCAGCTTCTCGAA
GAGCAACAAGTTTTTCAAGCTCGTGGCGGGCGAGACTGTTGCAAAGGCAA
GGCCGGTGCGGCGGCGACCGAGGCTGCCAAATCGGTCACCCTGCGCGCCG
AGAAAAGTGCGTGTGTTGTGTTGA back to top
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