EsuBft954_7a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft954_7a-0001
Unique NameEsuBft954_7a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_235contigScaffold_235:223657..228795 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7FNR4
ProteomeIdEsuBft954_7
Protein domainsPTHR11474
Protein domainsIPR002227
Protein domainsIPR008922
Ownerapollo_admin@sb-roscoff.fr
Nb exon9
Max annot lvl2759|Eukaryota
Length168
Hectar predicted targeting categoryother localisation
Evalue0.0
EggNOG OGs2CZRH@1|root,2SBDH@2759|Eukaryota
Date last modified2016-06-14
Date creation2016-06-14
DescriptionCommon central domain of tyrosinase
COG categoryS
Cross References
External references for this mRNA
DatabaseAccession
GO0016491
GO0005794
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft954_7aEsuBft954_7aEctocarpus subulatus male Bft15bgeneScaffold_235 223657..228795 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft954_7a-0001EsuBft954_7Ectocarpus subulatus male Bft15bpolypeptideScaffold_235 223864..228795 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft954_7a-0001-exonagat-exon-47328Ectocarpus subulatus male Bft15bexonScaffold_235 223657..224085 -
EsuBft954_7a-0001-exonagat-exon-47322Ectocarpus subulatus male Bft15bexonScaffold_235 224932..225144 -
EsuBft954_7a-0001-exonagat-exon-47325Ectocarpus subulatus male Bft15bexonScaffold_235 225299..225307 -
EsuBft954_7a-0001-exonagat-exon-47327Ectocarpus subulatus male Bft15bexonScaffold_235 225430..225616 -
EsuBft954_7a-0001-exonagat-exon-47326Ectocarpus subulatus male Bft15bexonScaffold_235 225888..226108 -
EsuBft954_7a-0001-exonagat-exon-47323Ectocarpus subulatus male Bft15bexonScaffold_235 226533..226753 -
EsuBft954_7a-0001-exonEsuBft954_7a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_235 227336..227459 -
EsuBft954_7a-0001-exonagat-exon-47321Ectocarpus subulatus male Bft15bexonScaffold_235 227886..228044 -
EsuBft954_7a-0001-exonagat-exon-47324Ectocarpus subulatus male Bft15bexonScaffold_235 228679..228795 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft954_7a-0001-exonagat-three_prime_utr-23448Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_235 223657..223863 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft954_7a-0001-cdsEsuBft954_7a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_235 223864..224085 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft954_7a-0001 ID=EsuBft954_7a-0001|Name=EsuBft954_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1680bp|location=Sequence derived from alignment at Scaffold_235:223657..228795- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTCTGTGTTTTTTCGTCCGTCGTGCTTTGTACTCCAGGTGGGACGT
TGATGGACACCTCCAAGGGTACGGTCGATCGGTGGACGTGCTCTTTACAG
CGGTTGGATCATACGAGTGCTCCGTGGTCGTCTTCGACCCCACCCTGACA
GGAAAAGACCCCACCCTGAGGGGGGGCACCACGGGCAACGAGGAGTCGGC
GAGAGTGGCGGGGCCTTACAGTTTCACGGTCGAAGTGAAGTACGTGAGGA
GGGAGATACGCTCCTTGAGTGACCAGGACCGCGAGATGTTCTTCAACGCA
GTGGCGGTCATGCAGAGGGTGCCGAGCGGGGTTGGACAGATCGTGTACGG
GTCGAACTACTACAGCAAGGACTACATTACCAGGCTTCACCTCTACTATG
GCGGCACGAAAAACTGCGACCACTGGCACCAGGGAGCCGGCTTCGTGACC
TCCCACATGGCCCTTACGCTCATGTTCGAGCAGTCCTTGCAGGCGATCAA
CCCGGCCGTTACGGTGCCCTACTGGGACTTCACCCTCGAGAGCACCTTCT
TCGGGTCGTCGGATTTCCGCTCCAGCGGCGTTTTCGCGGACGACTGGTTC
GGCGCGGCGTCTCCTGATAACGGCCTCCACACCCCGACCAAGGGGCGGTT
CGCGTACGCCCCCGCCATGGCCAACGCCAAGGAGTTCTCCAGTATCTACA
ACTCGTACGGCGTCCTGCGGTCCCCGTGGAACAACGACCCCTCGCCCTTT
ATGACGAGGAGTTCGATGATCTACGGATTCTTCAACAACCTCAAGCCCTC
CGGTTGCTTCGAGTACAGCCACGCCCTCGTAAATCAGGATTGGATGAGCT
TTTCCAAGGTCCTGAACGCCGCAGCGCACGGGCACATCCACGAGACGATG
GGGGGTTCGTGGAACCACTACTTCGGCCACGAGGCATCGGAGCTCGATGA
GGAGCAAGATGACAGTGTCATGACCTTCGCTCACGAGATACAGGCAAGCG
ACAGCAGCAACAATGGAAACGCCGTGCCCGGATACGAGGCGCTCAGCAAA
GAGCTTTGGCGATCGGGCTTCTTGGACTGCCCGGACACCTGTTCCATGGA
CACCCCCTGGCAGGACTGCCAGTGCCAGTGCGACGCCGGGGCCATCGGCA
GCCGCTCGGCGGCGCAGGTGCTGAAGGAGTCCGGGGTGTTGGACTCGGTC
TCATACTACGACTCCACGGGGGAACTCATCTCGTCCTTCGAGGACGAAAA
CGGCGACGTGTTGTTCACCCTACCGGGCTACTCCGAGGAGGAGAGCACCC
AGATCTACCAGCAGCTCATGTACCTGCTGTGCTCCCCGGGACACATTGGC
ACCATGTTCCAGGCCACCAGCACGAACGACATCACGTTCTGGGTGCTGCA
CCCCAGCGTCGACAGGTGCGCGAGCGACGACGAGAGACGGAGTAGTTGTT
GTTGGTGGTGTAGTAGTAGGTAGGTGCGCGAGGGAAGGAGGAGGTAGTTG
GTAGTTTTTGGTTCCTTGACGAATGAATAGTCGAAGGAGCAGAGGAGCGA
TACCTTCAAGCGAAGCAGCCCTTGGTACAGTATCCCGTCGTGCTTTCTGC
TGCTGTAGGCCCACAATTTATTTTTTTGAGGCCGCCCTGGTAAGGGTCCC
TCTCCGGTGTTGTGCGAGGAAGAGGAGGTA
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protein sequence of EsuBft954_7a-0001

>EsuBft954_7 ID=EsuBft954_7|Name=EsuBft954_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=490bp
MTLCFFVRRALYSRWDVDGHLQGYGRSVDVLFTAVGSYECSVVVFDPTLT
GKDPTLRGGTTGNEESARVAGPYSFTVEVKYVRREIRSLSDQDREMFFNA
VAVMQRVPSGVGQIVYGSNYYSKDYITRLHLYYGGTKNCDHWHQGAGFVT
SHMALTLMFEQSLQAINPAVTVPYWDFTLESTFFGSSDFRSSGVFADDWF
GAASPDNGLHTPTKGRFAYAPAMANAKEFSSIYNSYGVLRSPWNNDPSPF
MTRSSMIYGFFNNLKPSGCFEYSHALVNQDWMSFSKVLNAAAHGHIHETM
GGSWNHYFGHEASELDEEQDDSVMTFAHEIQASDSSNNGNAVPGYEALSK
ELWRSGFLDCPDTCSMDTPWQDCQCQCDAGAIGSRSAAQVLKESGVLDSV
SYYDSTGELISSFEDENGDVLFTLPGYSEEESTQIYQQLMYLLCSPGHIG
TMFQATSTNDITFWVLHPSVDRCASDDERRSSCCWWCSSR
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mRNA from alignment at Scaffold_235:223657..228795-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft954_7a-0001 ID=EsuBft954_7a-0001|Name=EsuBft954_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5139bp|location=Sequence derived from alignment at Scaffold_235:223657..228795- (Ectocarpus subulatus male Bft15b)
ATGACTCTGTGTTTTTTCGTCCGTCGTGCTTTGTACTCCAGGTGGGACGT TGATGGACACCTCCAAGGGTACGGTCGATCGGTGGACGTGCTCTTTACAG CGGTTGGATCATACGAGGTGAGACCCGATTCTGGAGACAGAGAAGCCGTG TTTTCGGTTCGGAGCTCTGGATAGCGACCACGTGTGACGACTGCTTTTTT GGTGTGGGCCGGGGCTGTTTGCTAACAGACATGCACAACACGAATTTTTG TGTGCGTGGGAAACGAGTCATTCCCGTCTTAAACAGTCTTGTGGCAACAC AAACGTGTGTTTGTTGTTGTGATCATAGCTCATCGGAAGAAATTTGCTGC AGAAGCTGAGGTATTCCGTTGTTGGCCCCTTGAGGAGCTGTTAGACAAGA GCTTGGCGTACGGCAGCAAAACAGGCAAGCGTCGTTGCGATTCCACTCTG GTAAACAGCTACTACCCCGTGCTACTACTGCTGCATCCCTCCTTTACCAA CTTGTGCTCACTTGCTCACCCAACACGCAGACGTCAATCCGTCGGATACA TACTCAAGGCAGACGGGCGTAGACTCTCCCCATGTATCGAATACACACAC CAAAACGACCGCCGTCATATGTATAGCAGCTGCTTCCCTCCGCCCACATG ATCTCCCTCGCTGTTCTAACCCCGTACGCATCCCACGCCCTCATCTTGTG CCTTCTCCCTCCCGCCACGTCTGCCGAATGATTGGTCAATCAAAATGACA GTGCTCCGTGGTCGTCTTCGACCCCACCCTGACAGGAAAAGACCCCACCC TGAGGGGGGGCACCACGGGCAACGAGGAGTCGGCGAGAGTGGCGGGGCCT TACAGTTTCACGGTCGAAGTGAAGTACGTGAGGAGGGAGATACGCTCCTT GAGTGACCAGGTAAAGAGCCGGCGGCCCCGCCGTGTGTGCTGCTCATCCT TGGGCGGGTGGGGGGGTGATCGTGTACCCTGCTGTTGCACTTGCCTCTCT GCTGCGAGTACTATTTATCGACGTGATATTTTGGTCTTTCTGCTTCTGGT AGGGATGCCGGTGATGGAGAGTTGGGTGTTGCCTCTGTTATCTTATGGTA AGAACGACGGTTTCCGACGACGGAACCGGAGGGAACGACGGGCGTGAAAG ACGCAAGTCTAGTGCTGCGCTCTTCCTCCATCCGCCAAACGCGTTGCACA AGAAACGAGTCCGACCCCTTTTCGCTTCAGCACGCTCTCGTTTCTCTGCT GCCCGACCGACCGTTCAATCGATCGCACGAAACTGTCTTAACTGATTTAT TTTTCACCTTTTTTCCCGGCGGGGGGGGGTTAACAGGACCGCGAGATGTT CTTCAACGCAGTGGCGGTCATGCAGAGGGTGCCGAGCGGGGTTGGACAGA TCGTGTACGGGTCGAACTACTACAGCAAGGACTACATTACCAGGCTTCAC CTCTACTATGGTAAGAAAAGCTGGCGACTGCCGTGCCACATGTTGGTTCG ATGTATTTTGTCTTGTGGAAATATACAGTGGTCTAACGACGGGTTTCCGT TGTCCACGGCGTTAGTGCGTGCTGCACACCTCTGGTGCGGTAGGTGCGGT GTTTTCATTGGTCCGATGGTTGTTGTGCGACATGCGATGGGCCCCTCGGG TTTCGTGGAGTTTTCTGTTGTTTCGTGGGTCGTGGACTCTGGTAAGAACT TCCCAGAATCTGTACTACGGTATGAAGGAATGATGCCATGCGGTGTTTTG CGGCATAGATTTTGTGGTGATAGTTGGAAACAGCAGTGGGGTGAAAAAAG CCCAAAAGGCGCTGCGAATTAATCCTTCGTGTGCCCCCACACACCCGTTG GCCGCGTCCTTACGTCGAGTTGAAACGTGTCACTCTTATGTCGCCGGTGT TGATTTGCACGTGTGTGAGCATCCTCGCGTCTGTCCTCGTCGCTACTTGT TTGTGTTTGTCTCGGAGGTGTTTACAACCCGCCCATCTATATCCATCCCA ACAAACGCCCGCCCGCTCTTCACCTCCGCCAAAAAACATCAGGCGGCACG AAAAACTGCGACCACTGGCACCAGGGAGCCGGCTTCGTGACCTCCCACAT GGCCCTTACGCTCATGTTCGAGCAGTCCTTGCAGGCGATCAACCCGGCCG TTACGGTGCCCTACTGGGACTTCACCCTCGAGAGCACCTTCTTCGGGTCG TCGGATTTCCGCTCCAGCGGCGTTTTCGCGGACGACTGGTTCGGCGCGGC GTCTCCTGATAACGTGAGACAGAGACAGAGACAGAGAGAGGAGGATGGAA AGGGAGAGACAGATAGAGATAAGGAGAGACAGAGAAAGAGATGGGTGCAG CAAGAGGATAGAGACATTCATGCAAGGGCAGAGACGTCAGGAAAAGAAAA ACCCGCACATGCCCCCGCAGGAAAAAAATGTCGGAGAACGAATGTTTTCG TATGTACTTGCTTCGAACATAAGGGGGACAGGGGGCAACTTCTTGTTTGA AAAATGCTGGTACAGCAGTATTGGTGTTCCTAGGATGTTTGGATTTTTCT ATTGATGCGGTCATTGTGTTTTTTTTAGGTTTTTGTGAAGACGTGTTGGA CGAGAGACCCCCGACCTAACGCATATTTTTTTCTTTTCCTCTCGATCGAA CGACCGGCGATGATAACGACAACGACAAAACAACCAGGGCCTCCACACCC CGACCAAGGGGCGGTTCGCGTACGCCCCCGCCATGGCCAACGCCAAGGAG TTCTCCAGTATCTACAACTCGTACGGCGTCCTGCGGTCCCCGTGGAACAA CGACCCCTCGCCCTTTATGACGAGGAGTTCGATGATCTACGGATTCTTCA ACAACCTCAAGCCCTCCGGTTGCTTCGAGTACAGCCACGCCCTCGTAAAT CAGGATTGGTGGGTTTGTTGTTCTTGTTCAGTAGCGTTAGTCTTTTTTTT TCATTCAAATACAAGGTGGTTGCCTTGCCTTCACACCAATGCGGAGAGAT TGTTTTCAGTTGTTTGTAATGATTGCTGTCGCATCGTGATTGGAAAACTG CAGTTGGTTCTGTACCTCTCTTACCTCTCTGCTGTTCACGGCGACACACG GTGACACACGTTCTGACCCTCGCCCCTCTCTCGCCATTCGTGCCTGTCAC TGGTTTTGTGTTGATGGTATGATGAGCAGGATGAGCTTTTCCAAGGTCCT GAACGCCGCAGCGCACGGGCACATCCACGAGACGATGGGGGGTTCGTGGA ACCACTACTTCGGCCACGAGGCATCGGAGCTCGATGAGGAGCAAGATGAC AGTGTCATGACCTTCGCTCACGAGATACAGGCAAGCGACAGCAGCAACAA TGGAAACGCCGTGCCCGTCAGGGATGATGATACAAAAGAACAAAGGCGTG AAACGGCAAGCAACAAATACCCGCACACATAGCATGTAGCCTGCGCCGGT GACAACCCGGCGTATCGCTATCCGTTCCAGCGTGGTAGGGATACGAGGTA TGTGGTCTACCGACCACGGCATATTGCGTTGACATGAGTGCCCCGCCCCC ACAAATACACGCACACACACATACACACACCCTGAACCCAACCCCCTTAC CCCCCACCCTCCTCCCCGCCGCGATCCTGATTCGTCCACCCACTCGGACA GGCGCTCAGCAAAGAGCTTTGGCGATCGGGCTTCTTGGACTGCCCGGACA CCTGTTCCATGGACACCCCCTGGCAGGACTGCCAGTGCCAGTGCGACGCC GGGGCCATCGGCAGCCGCTCGGCGGCGCAGGTGCTGAAGGAGTCCGGGGT GTTGGACTCGGTCTCATACTACGACTCCACGGGGGAACTCATCTCGTCCT TCGAGGACGAAAACGTGAGGTTTTTTCTCTGGTGTGACGATTTTGTTATC CTTTCGTTTTGGTTGAACAATACCCACTGCTGGTTTGCCTTGTTTTTTGG CTGAGAGAAAGGATCGCTCCGATAGATTCTTGGCGTCCACCAACGATATT TCCGACGTTGAATGAAGGGGTTGCCCCGGCTCGTGTTGAGGCGCGACTCG CGTTCCCGCGCGCGTTCCCTCTCCCCGAGGTGACCGCCTTTTTCTTCACA TCGACCAAACTTTTGCCACGGCCGCCGTCGGAAAGGGGCAACACTTTGTT TATTTTTACTTTTTTTGTGTGATTGTAACACAACACAACAAACCATAGAT TGTGATAATCAACGCGAAGTATCGTCGGCGCTGCCTGTATGAAGCTGTTT GTTTTTAGCGGATATGTCGCCGCGCGGTGGATTTTACAAGGCTGGCTCGA GTAGGGCGTGTTCACTTCATTTTAGCAGTTTAGTGTTGTCTCGGTTCCGT GTACTCGATCAGTACGAGCACATCATCGGCCAGTGGTGCGGTTGCTGCTG GCGGTCCCTGAGAATCTAACTTGCCCGAACTCATATCTCCGAGCGAAAGT ATTTCTGGGAGAGGAGAGAGCAGAGAAACAGCGGGCAACCTACATTTTTT TTTACATACATCGAAAGCTTCGATGGAGGTCGATATTGGTGAATTTCACA CAAGCTTCACACGCTTCCATGAAAGTAGACACGCGATTCCCAGGAAGCCG CGCAACCTCCATCGAGCCCGTATGTATGGTAGGCCGGTTACGTCAGCGCG GTTCGATGGCAGCAACGGCGTTTATTTTTACTTTTTTGGCACGTCCGCGC GCGCACACAGGGCGACGTGTTGTTCACCCTACCGGGCTACTCCGAGGAGG AGAGCACCCAGATCTACCAGCAGCTCATGTACCTGCTGTGCTCCCCGGGA CACATTGGCACCATGTTCCAGGCCACCAGCACGAACGACATCACGTTCTG GGTGCTGCACCCCAGCGTCGACAGGTGCGCGAGCGACGACGAGAGACGGA GTAGTTGTTGTTGGTGGTGTAGTAGTAGGTAGGTGCGCGAGGGAAGGAGG AGGTAGTTGGTAGTTTTTGGTTCCTTGACGAATGAATAGTCGAAGGAGCA GAGGAGCGATACCTTCAAGCGAAGCAGCCCTTGGTACAGTATCCCGTCGT GCTTTCTGCTGCTGTAGGCCCACAATTTATTTTTTTGAGGCCGCCCTGGT AAGGGTCCCTCTCCGGTGTTGTGCGAGGAAGAGGAGGTA
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Coding sequence (CDS) from alignment at Scaffold_235:223657..228795-

>EsuBft954_7a-0001 ID=EsuBft954_7a-0001|Name=EsuBft954_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1473bp|location=Sequence derived from alignment at Scaffold_235:223657..228795- (Ectocarpus subulatus male Bft15b)
ATGACTCTGTGTTTTTTCGTCCGTCGTGCTTTGTACTCCAGGTGGGACGT
TGATGGACACCTCCAAGGGTACGGTCGATCGGTGGACGTGCTCTTTACAG
CGGTTGGATCATACGAGTGCTCCGTGGTCGTCTTCGACCCCACCCTGACA
GGAAAAGACCCCACCCTGAGGGGGGGCACCACGGGCAACGAGGAGTCGGC
GAGAGTGGCGGGGCCTTACAGTTTCACGGTCGAAGTGAAGTACGTGAGGA
GGGAGATACGCTCCTTGAGTGACCAGGACCGCGAGATGTTCTTCAACGCA
GTGGCGGTCATGCAGAGGGTGCCGAGCGGGGTTGGACAGATCGTGTACGG
GTCGAACTACTACAGCAAGGACTACATTACCAGGCTTCACCTCTACTATG
GCGGCACGAAAAACTGCGACCACTGGCACCAGGGAGCCGGCTTCGTGACC
TCCCACATGGCCCTTACGCTCATGTTCGAGCAGTCCTTGCAGGCGATCAA
CCCGGCCGTTACGGTGCCCTACTGGGACTTCACCCTCGAGAGCACCTTCT
TCGGGTCGTCGGATTTCCGCTCCAGCGGCGTTTTCGCGGACGACTGGTTC
GGCGCGGCGTCTCCTGATAACGGCCTCCACACCCCGACCAAGGGGCGGTT
CGCGTACGCCCCCGCCATGGCCAACGCCAAGGAGTTCTCCAGTATCTACA
ACTCGTACGGCGTCCTGCGGTCCCCGTGGAACAACGACCCCTCGCCCTTT
ATGACGAGGAGTTCGATGATCTACGGATTCTTCAACAACCTCAAGCCCTC
CGGTTGCTTCGAGTACAGCCACGCCCTCGTAAATCAGGATTGGATGAGCT
TTTCCAAGGTCCTGAACGCCGCAGCGCACGGGCACATCCACGAGACGATG
GGGGGTTCGTGGAACCACTACTTCGGCCACGAGGCATCGGAGCTCGATGA
GGAGCAAGATGACAGTGTCATGACCTTCGCTCACGAGATACAGGCAAGCG
ACAGCAGCAACAATGGAAACGCCGTGCCCGGATACGAGGCGCTCAGCAAA
GAGCTTTGGCGATCGGGCTTCTTGGACTGCCCGGACACCTGTTCCATGGA
CACCCCCTGGCAGGACTGCCAGTGCCAGTGCGACGCCGGGGCCATCGGCA
GCCGCTCGGCGGCGCAGGTGCTGAAGGAGTCCGGGGTGTTGGACTCGGTC
TCATACTACGACTCCACGGGGGAACTCATCTCGTCCTTCGAGGACGAAAA
CGGCGACGTGTTGTTCACCCTACCGGGCTACTCCGAGGAGGAGAGCACCC
AGATCTACCAGCAGCTCATGTACCTGCTGTGCTCCCCGGGACACATTGGC
ACCATGTTCCAGGCCACCAGCACGAACGACATCACGTTCTGGGTGCTGCA
CCCCAGCGTCGACAGGTGCGCGAGCGACGACGAGAGACGGAGTAGTTGTT
GTTGGTGGTGTAGTAGTAGGTAG
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