Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 2880.D7FNR4 |
ProteomeId | EsuBft954_8 |
Protein domains | IPR008922 |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 3 |
Max annot lvl | 2759|Eukaryota |
Length | 37 |
Hectar predicted targeting category | other localisation |
Evalue | 1.69e-59 |
EggNOG OGs | 2CZRH@1|root,2SBDH@2759|Eukaryota |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
Description | Common central domain of tyrosinase |
COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft954_8a-0001 ID=EsuBft954_8a-0001|Name=EsuBft954_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=377bp|location=Sequence derived from alignment at Scaffold_235:222521..223513- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGATGGGAGTCCCCCCCTGCTTTTACTGTGGTCCGGATTCGACGAGCAC GTTGTGGCACCTCAAGCGCTTGGGTTCGAAGGATTTCAACGAGACGTGGG AATCGCTCCACGCTTGTGTGGGTCACAACCCGGCTGACCTCCAGCCGTTC CATGGGATGTTCCCGGACTGGGATGACAAGCACGCGGAGGAGGAGCTGGA GGACAGCGCAGCCTCGCCGTTGGCCAAGAGATACTATACCAACATGGAGC TCTACGGCCTTCTTAGGCCAGACCAGTCGGACCTGCCGTACGTTTACGAC AACTTCGCGTGGCCCCACTGTTCGGTGTTGGGAGAAGACATGGTAGCGTG AAGAGACCTTGGGTTGGTACAAGCCGG back to topprotein sequence of EsuBft954_8a-0001 >EsuBft954_8 ID=EsuBft954_8|Name=EsuBft954_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=116bp
MMGVPPCFYCGPDSTSTLWHLKRLGSKDFNETWESLHACVGHNPADLQPF HGMFPDWDDKHAEEELEDSAASPLAKRYYTNMELYGLLRPDQSDLPYVYD NFAWPHCSVLGEDMVA back to topmRNA from alignment at Scaffold_235:222521..223513- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft954_8a-0001 ID=EsuBft954_8a-0001|Name=EsuBft954_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=993bp|location=Sequence derived from alignment at Scaffold_235:222521..223513- (Ectocarpus subulatus male Bft15b) ATGATGGGAGTCCCCCCCTGCTTTTACTGTGGTCCGGATTCGACGAGCAC
GTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CCGCCCCTCCGACCTGTCGACCCCCCCGAAACCCCCCACGAACGCCTCGA
CGACGACAGGTTGTGGCACCTCAAGCGCTTGGGTTCGAAGGATTTCAACG
AGACGTGGGAATCGCTCCACGCTTGTGTGGGTCACAACCCGGCTGACCTC
CAGCCGTTCCATGGGATGTTCCCGGACTGGGATGACAAGCACGCGGAGGA
GGAGCTGGAGGACAGCGCAGCCTCGCCGTTGGCCAAGAGATACTATACCA
ACATGGAGCTCTACGGCCTTCTTAGGCCAGACCAGTCGGACCTGCCGTAC
GTTTACGACAACTTCGCGTGGCCCCACTGTTCGGTAAGTGCTATGCTTGT
CTTGTTTTGTTTTGTCTTGTTTCCTTGCGTTTTTTTTTTTTTTTTGTGCG
CGTGTTTGGTGAGTGTTTCGTGTGTGTGTGTGTTCGTGTGTGTGTGATTG
CCTCTTTTTTTTTTGTGCTGTAGCCTTTGGTTTTTCGCAAAGGTGAGATA
CACGTGTTCACAGAGGCTGACGTGCGATGGCGCTTGGGCAGTTTTTATCT
CCTATTTTCTACTTTCACGCTTTTCATGTACTGTTTGCTCCACGTCTCGC
GCACTGTGAGGGTGTTTTCTTGTTGTTTGATCACCGATATCCTTCCTGCG
CCTCTTGCTGTTTGTTCGATAGCGACATACGTGACTCCAATCCAGTTTGA
ACTCAAATCAACGCCCACAGCTCGACACCTGCATTTCTTAATCTCGTGTC
GTTTTTGGCTCGTGCCGGTGCTCTCCTTGTCTCCTCCCAGGTGTTGGGAG
AAGACATGGTAGCGTGAAGAGACCTTGGGTTGGTACAAGCCGG back to topCoding sequence (CDS) from alignment at Scaffold_235:222521..223513- >EsuBft954_8a-0001 ID=EsuBft954_8a-0001|Name=EsuBft954_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=351bp|location=Sequence derived from alignment at Scaffold_235:222521..223513- (Ectocarpus subulatus male Bft15b) ATGATGGGAGTCCCCCCCTGCTTTTACTGTGGTCCGGATTCGACGAGCAC GTTGTGGCACCTCAAGCGCTTGGGTTCGAAGGATTTCAACGAGACGTGGG AATCGCTCCACGCTTGTGTGGGTCACAACCCGGCTGACCTCCAGCCGTTC CATGGGATGTTCCCGGACTGGGATGACAAGCACGCGGAGGAGGAGCTGGA GGACAGCGCAGCCTCGCCGTTGGCCAAGAGATACTATACCAACATGGAGC TCTACGGCCTTCTTAGGCCAGACCAGTCGGACCTGCCGTACGTTTACGAC AACTTCGCGTGGCCCCACTGTTCGGTGTTGGGAGAAGACATGGTAGCGTG A back to top
|