EsuBft321_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft321_3a-0001 ID=EsuBft321_3a-0001|Name=EsuBft321_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2711bp|location=Sequence derived from alignment at Scaffold_235:36289..42658- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GGCGACGGGCGCGTCACACAGAGGACTACACAAGGGTTACCGAGGCCCTG
AGCAAGCACCATGGCGGACACACCGGTGGTGGTTGAGTACTCAATGACGG
AGGTCGCGACTCACACGACGAAGGAGAGCACATGGTTGGTCATCAAGGAC
ATGAACGACGGCGACACCCCCAAGGTTTACGACGTGTCGAGCTACCTGAA
CGACCACCCGGGGGGCGCGGAGGTGATGATGGAGGTGGCCGGGCAGGACG
CGACTAACATGTTCGAGGACATCGGGCACTCCTCGGACGCAAGAACGGAG
ATGAAGAAGTTCCAGATAGGGCTTCTCAAGCTGACAGACGAGGAGAGGGC
TAAGATTGCGCAGGAGGCGGCGAAGAAGGCCGAGCGGGCGTCGCGACAAG
GGGGAGGGCTCAACCCCCTCGCGGTGTTGGTTTTGCTTTTGGCCATCTCA
ATCGGGTATTACTACTCCAACCAAAAGGCGTGACCAGTGACGTCATGGCT
TCCTTGCGCTCGGGTTATTTGTTTTCGCCGGTGGGGTAGTTGCTCCTCCC
CGCCCCTGGTATCTAAACTTCCTAGATGTGTCTCTCTAGCGAGAGCTTGA
GATCGTGGGAGCGAACTAGAGTTCTGGTTACGACGCCGCGAACGGCAGCT
TGGTGATTGCCGGGCGCTGTGCTTGCTTTCACGCTTTTACATGGCGTTTC
GACCGTTTGCTGAAGCCGAGACACGCTGAGGAGGGCGGGGCACACGGGTG
CGAATGTTCCCATTACGATTGATTGGTCGAGCCTTTCCGGCGGCTCTCGC
CAGGGGTGGGAAAAGGAGGCGGGCGGAACATCGCCCTGGAAGAGAATAGC
GAGCCGGTGCATGGTAGGGTTTCGTGTTCACCGTTCTGTTTACTTCGTGT
CATGAGCACGAGGGGCGGCCGCAGGAGAGCCTGGGGGGGAGGGGTAAGGG
GGGGGCTGTGCACCACGTCCCCCCCCCTCTACTCTCAATCGCTGCTGCTC
GTGGGGTGTGGGCGATGTTGCCCTCTGCGGTTGTTTGTGAAGGAGTTTGT
TGTGTTTTGTTGGTAATTCAAGAAGGTCGTTTGGTTCCACGTCATTTTCA
AGACCAACCGCTTCGCCTTCGGTCTCTCGAAAAGCGTGCTTCTTTTTGCC
GGCACGTGCATCAGACAATCAGCACTGACTGACGTGATGACACACCTGGG
TGCGCAAGGGCAAGGGACATGTTGCGAGCACGGGCAACTACATACAACTG
CCATTTCTGTCTGTAGAACTTAACCATGGTCACCGGTACACTGGTACACC
ATGATCGGTACACTATTGCTGAACGACCGTCAAACTTTGATGCTCTGGTT
GGGTCTAGAGACGGGCACGAAGGAAAGAAATACAAATAAGAATGGGAACT
ACTCTGGGCTCTCAACCCCCACCCTCCCCTCGCACACCCTGTGAAACCTC
GAAACCGCTTCGTCTGAGACAACAGCGGACACAATCAACTACAGCACGAT
CAAGATCCGCTTGGCTGCGGCGTGCTGTGGGTTGCCTCTGGGGCGTCGCG
TACCCCTTGCGGCCAACACAAGCGGACAACGTGCGTTCGAAACGAGCACG
TTCAGATAGTTCCTACCTGCAGTTGTGACAGCAGCAGTTATTACAAATTG
ATTAGATTTGCACAACTCCGCGCGATGAGGGGTGGTGGGGCAGCCTCTCG
CACCTCACGCTCCGCGACGCCCCTACTCTCGTCTACTCCGAGCACCCACA
CCAAGTCCAGGAAAGTTTTGGATTCCGTCGCGCTTAACAGTTATCATCCG
ACTACGAGCGGAATGGAGTCGAAAAGTTGCCACACTGCTGTGCCGTCGGT
GTTGTGGTCCTGGTTAATGAGCAACTCCTTCCGCGCTACCGACCCATGCA
AGTAACGATCAACACAGACAGGCCCGGTCGCTCCCCTTGACTTCTAGGAG
ACAACAAAGGCGGGCATTATTAGACTCCGGGAGGGGCTACCCCTTGCCTG
CTGTTACAAACTAACCCAGAGAACGCCTGTGCACGGTAAACCGCACAATG
GTGTACGGCCACCCCAAGATGGAGGCCTCGCGCCCTATTCACTGTCTTTC
CTTCCGGCACTGGTGCCGCGGTCGCCGCCCCAGTGAGCATCACGCCCCGG
TTGCCGTCGCTTTGCTGAGGGGTAGCAAGGCGGACCGGATCGACCTCGTT
GGGGTTATTTTTACTGTTCCCAGCACGGGCATGTCCTTCTCCACCGCCAC
CGCCGCCGCTCTTGCTAGGAGACGCAACTCGGGCGTCCTTTACTCAGGCG
ACAGCCATCCATGAAAAAAGGGGTTGGGGGGGCAGGGGATGATATATTAT
TGGCATATCATAGGCATTTCGGGATCCATGTGATCATGGCGCGCAGCATC
GCTTTTAAGATATGAAGCATTCTCGACCACAACAGCACCAGACCTACGCC
ACCCGGACCAAAACCTCAGCCCAAACATGATACTCCGTAAGACCCCAGTA
TCAGCTGAGGGGGCCGAGTTGAACAGACAAATCTACAAGGGCAAGGACAC
GGTTTTTTGGCGAGACTATCGACACGCCTCGTACACCGCACCACCAACGT
CCCACGGTGTGCGCAGAAGAAGAAGGGTGCGCCCCCCCCGCCTACTTGCC
TACCCCCAGCCCACCCTCTACCACACTAAACCGAAGTAAAAGCTTTCGCT
CTTAACTTGAC
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protein sequence of EsuBft321_3a-0001

>EsuBft321_3 ID=EsuBft321_3|Name=EsuBft321_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=140bp
MADTPVVVEYSMTEVATHTTKESTWLVIKDMNDGDTPKVYDVSSYLNDHP
GGAEVMMEVAGQDATNMFEDIGHSSDARTEMKKFQIGLLKLTDEERAKIA
QEAAKKAERASRQGGGLNPLAVLVLLLAISIGYYYSNQKA
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mRNA from alignment at Scaffold_235:36289..42658-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft321_3a-0001 ID=EsuBft321_3a-0001|Name=EsuBft321_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6370bp|location=Sequence derived from alignment at Scaffold_235:36289..42658- (Ectocarpus subulatus male Bft15b)
GGCGACGGGCGCGTCACACAGAGGACTACACAAGGGTTACCGAGGCCCTG
AGCAAGCACCATGGCGGACACACCGGTGGTGGTTGAGTACTCAATGACGG
AGGTCGCGACTCACACGACGAAGGAGAGCACATGGTTGGTCATCAAGGAC
ATGAACGACGGCGGTACGTTTGTACGCGTGTTTCTCGCACTACATGTATT
CTTCGCTAGCGACTTTGTCGGTCGAACATATCCTTCATTTACCAGCAGCA
GTTATCTCTCGTATGGCAGCCTCCAGAGAGCCGAATGTAGCTGATAGCGA
TGGAGGGTTTCGTGGGTCACATACCAAACGAACCAATTGTATCAAAGCTG
AGAACCCATGCGATGGGGTGGGGCGAGGTACGAGCCATTTTGTATTTTGA
AGTGACGATACGCCCAGCGGGTCTACCAGCTGTAAGATTCTGGTTCAGCC
TGGCCTGCTGAGCTTGATTTCTCCCAGCTGGTGCTGGTGTGTGTGTTTTC
CTCCTATTGTGTACATGGCGCCAACATATAGGGTCTTCTGCTATGAAGAC
ACGCACGCACACACGACGACTCCTCACTAGCTACACCCAAGCTCGTGACA
CCTCCAATGACGGTCTTGGTGTCATGGATGATGGGTGTTGACGTGACGAA
GAACACAAATCATGACCGCATCACCATTGAGGCGGGGGGGGGGGGGGGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGG
GGGGGGCACGGGGGAACGGCTGTTGCTGTCGTGTACCGACAGCAAACAAG
CAAAGCAGACCAACGCAAGGCAGGGAGCAGTCGCTTCCAGATGCCTGCAC
AGAGCAGCAGGCCTGTCGTGTGTAGTCGAGCGCTGCGACGAAGTGTTCTG
CGCTGCCGTGCCATTTGGGTCTACTCTGCTGTTGTGCTGTACACAAGTGT
TGCGAAGTGTCGTTGATCATGTCGTTCGTACACATACAGCAGTAGACCTT
CAGGCACACTCGTATCCAGAGGCACACAGCACCAGTGAGCCAATACAATA
GCAAGGATGCATTCGAGCGGGCGGTGTACCTATGCCGCACGCTACAATAC
ACGCTACTCGGTGGAGACGTATTCGTCACTTCGAAGATTGTACGGCCGTT
GTAGCACTTAAGCAATATTTACAAAAATAGAAAACAGCGGTATGGAAATG
AGATGTCTATGCATACGGACCCCAACCAAACAGCAGGTGTCTGTCCCCTG
TATATTGTACATACAACACGTGCACACACCCGAACATGAAACTTTCGGAA
CGTGCCAAGTGCACCACAGCGGCAAGCGTCTATGGCTGTACGGCCTATGA
GAGGTTTTGTAACCACTATCCACATTCGATGCTAATGCATGCAACACCGG
TTGCGTTCCAACCGCGGCCAAGATGATCCTCGCACTTGGCGCGGAAGTTA
GTTTGTGTTACGTTCCACGGGCGCGGTCACTGAGGTCAGACCACCCCCGT
GACAGTGCAGCATAAGAACCAACAGAAGGATAGATAGGATGTTGCTTCGA
GTACATAAGTACTACAACACCCTGAGAGTTAAGTAGTTGTACGAGCGACT
CACCGCCATCGGTACCGCAACGTAAGGATCACCGGTGCGTCGCTGCAGTC
AGGAATAGTTTTGCTCTTTTTGCTCGAAATTACTGCTGCGTCGCCTTAGC
GATGGATACCTAGAATCCTTTCGGGATGAGTATTTGGGTTTTTTTCATCA
GGCATACGGCGTTGGTTTGCCTGCTTGCCTGCTGCTCTGCTTGTTCTACC
CCTAGTCTACGACAGCAGTTGGCATGCCAGGCAGAGACTCCCACAGTTGA
CGTCAACCCCCATAGCCACAACCTCTTGAGACGACCACACACGCAGAAAA
CGACAGTGATCGTCCTCGTACATCATGATTTAGAACAGAACATTTTCTAG
TCTGGCGATGCCCCCCCCCCTCCCCCCGGCCTCCCTGCCCATTGTTTTTC
GTCATCCGTGCATGTGTAACGTTGAGCGGAAAGAAGAGCATTCAGTCGCG
CCGCCGGTGTTCCAAAACACTATTGCTCCCATGTGCGGTGTCCCTTGTCT
GTCCGCCTCCATCGGCTGTTTCTCGCCTTACTCTTGCCCCGACAACAACA
ACAACGACGACGACGGCAACGGCAACGATAACCTCAGACACCCCCAAGGT
TTACGACGTGTCGAGCTACCTGAACGACCACCCGGGGGGCGCGGAGGTGA
TGATGGAGGTGGCCGGGCAGGACGCGACTAACATGTTCGAGGACATCGGG
CACTCCTCGGACGCAAGAACGGAGATGAAGAAGTTCCAGATAGGGCTTCT
CAAGGTGCGTCTGCTGCGCGTCCTGTGTACGTATGCTTGCATCGCCGTTT
CGCTTCTTCGCTGCTGTGTCGCTATAGCGTCGACCGATGTCAACGCCAAT
TGTAAGACTCCAGTCTCGGCGGGGGGACATGAAATCCCGGAACCGCCTTC
GATTTTGTCCTTTGCTCCTCTGCTGTCTCTCGCTTCTTGTTGCTTGCTGT
GCTTTTTCTCGTTTTTGTGTTTTCCTTTGCCGTGCTTGGTTGACCAACAG
TACTTATTCCTATGGACCACCTGTTGCCGATAGGTCAACCAATGCGCTAG
TCAAATCGCAACCCATTCTCAAATCGCAACCCGTGAAGGGTGCGGCCGAC
GAGGAGCACAAGGACCAGCAGGAGGAGGAGGAAGGGACCGCCCTCATCCC
TCACGAATTGCGATTTGAGAATGGGTTGCGATTTACGATGCCTTCCTCCT
TCTTGTTCTCGTGGTTGTCCTTCTGCTCGTCGTCGGCTGCATCCTTCACG
GATTGCGATTTGACTATTTAGCGCATGGATTGGCCTACCGGTAAAGGTTG
TCCATGGGAATAAGCGCTGGTGTGCTACGAGGAGAAGACTCAATACTGTC
AGGCAGCATTGCTGCTCCATCATCTCGTTCTCTCAGACGAACATCATTGT
AGCATACAGACAATCTCATCTTCGTTTCGTCCCCGTTCCGATTCGAGGTG
TGTGAGTGACGAGAGGAGTGCTTGAAAAATCGCAGCCAATGAACCAACAC
ACGAGAATTATTCGTGCTTGCCAACAACCAAAAACAGGTATTTGGAGAAC
GAACAAATAAAGCACCCATTGATTATAGCCCAGGACCCTCTCAAATCGGT
TTCTGTACCTTGCACCGCACGGAAGAAGAGATACTGAACGGCACTCACAG
CGAATTGAAAATAACGGCAATAACAAAAACAGTTTGTCGTACATAAACGG
ACCAAACCCTCCTAATGCTTTTTGCTACTCGGGGGCGCTTTTCATTGCTG
CTGCTGTACTGTATTGCTACTGCTGCACTGTATCGGGCAGCTGACAGACG
AGGAGAGGGCTAAGATTGCGCAGGAGGCGGCGAAGAAGGCCGAGCGGGCG
TCGCGACAAGGGGGAGGGCTCAACCCCCTCGCGGTGTTGGTTTTGCTTTT
GGCCATCTCAATCGGTGAGAACGAGCGATGTGTCGGCCATTTTTACTTTG
TGTGAGTTGTTTTTTGGTTTTCGGCCATCTCAGTCGTTTTTGCTGCGTGT
CGTCGCTTGTGGCCATCTCAGTTGGTAGGAACGAGAAATTTGTTCGTGCT
CGCGGCTATTTGGTTTTGCTTTCGGGCGACACTCTAGTAAACGCCGCGAG
GGCAAGCCACTGTTCCGGAGTATCGAAGCCCCCGTGGCAAAAGAATGTTT
TTTTTTGTTTCATTGGTGTCGGTTCTTGCTGCTCTTTTCAGGGTTTCGTG
CCGTTCGCCCCGGTGTACTTTTGATGAAAGGCACACCCCTGTTTTCGAAT
CCCTGGCTCTGGAAACCCGGAACAAGGTCGATGAAACGTACTTCGACGGT
GTCGTTGACGCTAAAGTGGATAGAAATAGTTGTACACATTTGCGCACATG
TGTGCAGGTTGATGCTGTTGGCTGGTAAATATGGACCTCTTGAACCCATA
TCTCGTCTCCTTCCCGTCTCCCCTTCTCTCCTCCCGTTCTGTCTCCCAAA
CACTCAATACTCATGACGTGTGCGCGCGCGTGTGTGTCGGGTTCTCCGTG
TGCACTCTCGCAGGGTATTACTACTCCAACCAAAAGGCGTGACCAGTGAC
GTCATGGCTTCCTTGCGCTCGGGTTATTTGTTTTCGCCGGTGGGGTAGTT
GCTCCTCCCCGCCCCTGGTATCTAAACTTCCTAGATGTGTCTCTCTAGCG
AGAGCTTGAGATCGTGGGAGCGAACTAGAGTTCTGGTTACGACGCCGCGA
ACGGCAGCTTGGTGATTGCCGGGCGCTGTGCTTGCTTTCACGCTTTTACA
TGGCGTTTCGACCGTTTGCTGAAGCCGAGACACGCTGAGGAGGGCGGGGC
ACACGGGTGCGAATGTTCCCATTACGATTGATTGGTCGAGCCTTTCCGGC
GGCTCTCGCCAGGGGTGGGAAAAGGAGGCGGGCGGAACATCGCCCTGGAA
GAGAATAGCGAGCCGGTGCATGGTAGGGTTTCGTGTTCACCGTTCTGTTT
ACTTCGTGTCATGAGCACGAGGGGCGGCCGCAGGAGAGCCTGGGGGGGAG
GGGTAAGGGGGGGGCTGTGCACCACGTCCCCCCCCCTCTACTCTCAATCG
CTGCTGCTCGTGGGGTGTGGGCGATGTTGCCCTCTGCGGTTGTTTGTGAA
GGAGTTTGTTGTGTTTTGTTGGTAATTCAAGAAGGTCGTTTGGTTCCACG
TCATTTTCAAGACCAACCGCTTCGCCTTCGGTCTCTCGAAAAGCGTGCTT
CTTTTTGCCGGCACGTGCATCAGACAATCAGCACTGACTGACGTGATGAC
ACACCTGGGTGCGCAAGGGCAAGGGACATGTTGCGAGCACGGGCAACTAC
ATACAACTGCCATTTCTGTCTGTAGAACTTAACCATGGTCACCGGTACAC
TGGTACACCATGATCGGTACACTATTGCTGAACGACCGTCAAACTTTGAT
GCTCTGGTTGGGTCTAGAGACGGGCACGAAGGAAAGAAATACAAATAAGA
ATGGGAACTACTCTGGGCTCTCAACCCCCACCCTCCCCTCGCACACCCTG
TGAAACCTCGAAACCGCTTCGTCTGAGACAACAGCGGACACAATCAACTA
CAGCACGATCAAGATCCGCTTGGCTGCGGCGTGCTGTGGGTTGCCTCTGG
GGCGTCGCGTACCCCTTGCGGCCAACACAAGCGGACAACGTGCGTTCGAA
ACGAGCACGTTCAGATAGTTCCTACCTGCAGTTGTGACAGCAGCAGTTAT
TACAAATTGATTAGATTTGCACAACTCCGCGCGATGAGGGGTGGTGGGGC
AGCCTCTCGCACCTCACGCTCCGCGACGCCCCTACTCTCGTCTACTCCGA
GCACCCACACCAAGTCCAGGAAAGTTTTGGATTCCGTCGCGCTTAACAGT
TATCATCCGACTACGAGCGGAATGGAGTCGAAAAGTTGCCACACTGCTGT
GCCGTCGGTGTTGTGGTCCTGGTTAATGAGCAACTCCTTCCGCGCTACCG
ACCCATGCAAGTAACGATCAACACAGACAGGCCCGGTCGCTCCCCTTGAC
TTCTAGGAGACAACAAAGGCGGGCATTATTAGACTCCGGGAGGGGCTACC
CCTTGCCTGCTGTTACAAACTAACCCAGAGAACGCCTGTGCACGGTAAAC
CGCACAATGGTGTACGGCCACCCCAAGATGGAGGCCTCGCGCCCTATTCA
CTGTCTTTCCTTCCGGCACTGGTGCCGCGGTCGCCGCCCCAGTGAGCATC
ACGCCCCGGTTGCCGTCGCTTTGCTGAGGGGTAGCAAGGCGGACCGGATC
GACCTCGTTGGGGTTATTTTTACTGTTCCCAGCACGGGCATGTCCTTCTC
CACCGCCACCGCCGCCGCTCTTGCTAGGAGACGCAACTCGGGCGTCCTTT
ACTCAGGCGACAGCCATCCATGAAAAAAGGGGTTGGGGGGGCAGGGGATG
ATATATTATTGGCATATCATAGGCATTTCGGGATCCATGTGATCATGGCG
CGCAGCATCGCTTTTAAGATATGAAGCATTCTCGACCACAACAGCACCAG
ACCTACGCCACCCGGACCAAAACCTCAGCCCAAACATGATACTCCGTAAG
ACCCCAGTATCAGCTGAGGGGGCCGAGTTGAACAGACAAATCTACAAGGG
CAAGGACACGGTTTTTTGGCGAGACTATCGACACGCCTCGTACACCGCAC
CACCAACGTCCCACGGTGTGCGCAGAAGAAGAAGGGTGCGCCCCCCCCGC
CTACTTGCCTACCCCCAGCCCACCCTCTACCACACTAAACCGAAGTAAAA
GCTTTCGCTCTTAACTTGAC
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Coding sequence (CDS) from alignment at Scaffold_235:36289..42658-

>EsuBft321_3a-0001 ID=EsuBft321_3a-0001|Name=EsuBft321_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=423bp|location=Sequence derived from alignment at Scaffold_235:36289..42658- (Ectocarpus subulatus male Bft15b)
ATGGCGGACACACCGGTGGTGGTTGAGTACTCAATGACGGAGGTCGCGAC
TCACACGACGAAGGAGAGCACATGGTTGGTCATCAAGGACATGAACGACG
GCGACACCCCCAAGGTTTACGACGTGTCGAGCTACCTGAACGACCACCCG
GGGGGCGCGGAGGTGATGATGGAGGTGGCCGGGCAGGACGCGACTAACAT
GTTCGAGGACATCGGGCACTCCTCGGACGCAAGAACGGAGATGAAGAAGT
TCCAGATAGGGCTTCTCAAGCTGACAGACGAGGAGAGGGCTAAGATTGCG
CAGGAGGCGGCGAAGAAGGCCGAGCGGGCGTCGCGACAAGGGGGAGGGCT
CAACCCCCTCGCGGTGTTGGTTTTGCTTTTGGCCATCTCAATCGGGTATT
ACTACTCCAACCAAAAGGCGTGA
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